RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	SNO4	Q04902	237 aa		3.89	□□□□□ -1.79
RPG1	YBR079C	BRX1	Q08235	291 aa	Known RBP	3.89	□□□□□ -1.79
RPG1	YBR079C	HRT1	Q08273	121 aa		3.89	□□□□□ -1.79
RPG1	YBR079C	HSP33	Q08914	237 aa	Known RBP	3.89	□□□□□ -1.79
RPG1	YBR079C	HSP32	Q08992	237 aa		3.89	□□□□□ -1.79
RPG1	YBR079C	NPC2	Q12408	173 aa		3.89	□□□□□ -1.79
RPG1	YBR079C	ODC2	Q99297	307 aa		3.89	□□□□□ -1.79
RPG1	YBR079C	GAL4	P04386	881 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
RPG1	YBR079C	ECM15	P35195	104 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	PAN3	P36102	679 aa	Predicted RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	OCA5	P38738	679 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	VPS52	P39904	641 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	BMT5	P40493	336 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	OTU1	P43558	301 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	TUB4	P53378	473 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	MTQ2	Q03920	221 aa	Predicted RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	ISR1	Q06098	443 aa	Known RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	PEX30	Q06169	523 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	SCP1	Q08873	200 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	BTS1	Q12051	335 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	RTK1	Q12100	620 aa	Predicted RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	YRM1	Q12340	786 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	TRM13	Q12383	476 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	DET1	Q99288	334 aa	Known RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	FSH3	Q99369	266 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	MSB2	P32334	1306 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	FUS1	P11710	512 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	YPK2	P18961	677 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	TIM12	P32830	109 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	DOA1	P36037	715 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	ZIM17	P42844	174 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	TYW3	P53177	273 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	PDR16	P53860	351 aa	Known RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
RPG1	YBR079C	LEE1	Q02799	301 aa	Known RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	ODC1	Q03028	310 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	NAG1	Q8TGN9	163 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	QCR7	P00128	127 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	FUR4	P05316	633 aa	Known RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	ISC10	P32645	267 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	RRP3	P38712	501 aa	Known RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	COS8	P38723	381 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	ANS1	P38832	159 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	ARO9	P38840	513 aa	Predicted RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	GCV3	P39726	170 aa	Predicted RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	PUG1	P40100	303 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	OSW5	P40219	148 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	SLS1	P42900	643 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	NSE4	P43124	402 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	YGL117W	P53133	265 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	PUS9	Q12069	462 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.88	□□□□□ -1.79
RPG1	YBR079C	DFG16	Q99234	619 aa		3.88	□□□□□ -1.79
RPG1	YBR079C	CWH43	P25618	953 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	DBF20	P32328	564 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	RTG1	P32607	177 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SFA1	P32771	386 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	CHK1	P38147	527 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SKN7	P38889	622 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	YNL208W	P40159	199 aa	Known RBP	3.87	□□□□□ -1.79
RPG1	YBR079C	YIL166C	P40445	542 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SMK1	P41808	388 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	PHB2	P50085	310 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	YIP4	P53093	235 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SNT309	Q06091	175 aa	Predicted RBP	3.87	□□□□□ -1.79
RPG1	YBR079C	GRC3	Q07845	632 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	RDR1	Q08904	546 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	AIR2	Q12476	344 aa	Known RBP	3.87	□□□□□ -1.79
RPG1	YBR079C	VMA9	Q3E7B6	73 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	Q0142	Q9ZZW4	58 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	INH1	P01097	85 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	COX9	P07255	59 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SED4	P25365	1065 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SDS24	P38314	527 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	MOB1	P40484	314 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	CIN2	P46670	268 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	UBP8	P50102	471 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	OGG1	P53397	376 aa	Predicted RBP	3.87	□□□□□ -1.79
RPG1	YBR079C	SKO1	Q02100	647 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	CTF19	Q02732	369 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	SNO1	Q03144	224 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	YPR091C	Q06833	770 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	RRT7	Q07829	113 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	XYL2	Q07993	356 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	OPI10	Q08202	246 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	TFC7	Q12415	435 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	PRM4	Q12498	284 aa		3.87	□□□□□ -1.79
RPG1	YBR079C	MEX67	Q99257	599 aa	Known RBP	3.87	□□□□□ -1.79
RPG1	YBR079C	RPS13	P05756	151 aa	Known RBP	3.86	□□□□□ -1.79
RPG1	YBR079C	PUT1	P09368	476 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	SSA3	P09435	649 aa	Known RBP	3.86	□□□□□ -1.79
RPG1	YBR079C	HOM2	P13663	365 aa	Known RBP	3.86	□□□□□ -1.79
RPG1	YBR079C	GAS1	P22146	559 aa	Known RBP	3.86	□□□□□ -1.79
RPG1	YBR079C	COQ2	P32378	372 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	OAR1	P35731	278 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	RPP1	P38786	293 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	RIP-Chip
RPG1	YBR079C	LYS1	P38998	373 aa	RIP-Chip data	3.86	□□□□□ -1.79	not detected
RPG1	YBR079C	AGX1	P43567	385 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms