RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 KRE29P40026 464 aa6.26□□□□□ -1.41
NME1NME1 COA1P40452 197 aa6.26□□□□□ -1.41
NME1NME1 YNL040WP53960 456 aaPredicted RBP6.26□□□□□ -1.41
NME1NME1 DIB1Q06819 143 aaPredicted RBP6.26□□□□□ -1.41
NME1NME1 BSC6Q08280 497 aa6.26□□□□□ -1.41
NME1NME1 CSE1P33307 960 aa6.25□□□□□ -1.41
NME1NME1 MRPL3P36516 390 aa6.25□□□□□ -1.41
NME1NME1 MBA1P38300 278 aa6.25□□□□□ -1.41
NME1NME1 SMC2P38989 1170 aaKnown RBP6.25□□□□□ -1.41
NME1NME1 BDH1P39714 382 aa6.25□□□□□ -1.41
NME1NME1 EDC2P40023 145 aaPredicted RBP6.25□□□□□ -1.41
NME1NME1 YJL118WP47022 219 aa6.25□□□□□ -1.41
NME1NME1 TAD2P47058 250 aa6.25□□□□□ -1.41
NME1NME1 COG7P53195 279 aa6.25□□□□□ -1.41
NME1NME1 CAX4P53223 239 aa6.25□□□□□ -1.41
NME1NME1 YOL107WQ12239 342 aa6.25□□□□□ -1.41
NME1NME1 COX2P00410 251 aa6.24□□□□□ -1.41
NME1NME1 RSR1P13856 272 aa6.24□□□□□ -1.41
NME1NME1 IMP1P28627 190 aa6.24□□□□□ -1.41
NME1NME1 ASP1P38986 381 aaPredicted RBP6.24□□□□□ -1.41
NME1NME1 YIL012WP40551 113 aa6.24□□□□□ -1.41
NME1NME1 PRP24P49960 444 aaKnown RBP6.24□□□□□ -1.41
NME1NME1 LIF1P53150 421 aa6.24□□□□□ -1.41
NME1NME1 PEX31P53203 462 aa6.24□□□□□ -1.41
NME1NME1 SFH1Q06168 426 aa6.24□□□□□ -1.41
NME1NME1 PER33Q12144 273 aa6.24□□□□□ -1.41
NME1NME1 RPB9P27999 122 aa6.23□□□□□ -1.41
NME1NME1 BTS1Q12051 335 aa6.23□□□□□ -1.41
NME1NME1 YDL211CQ12121 372 aa6.23□□□□□ -1.41
NME1NME1 PET494P07390 489 aaPredicted RBP6.22□□□□□ -1.41
NME1NME1 HSM3P38348 480 aa6.22□□□□□ -1.41
NME1NME1 IBA57P47158 497 aa6.22□□□□□ -1.41
NME1NME1 TRM44Q02648 567 aaKnown RBP6.22□□□□□ -1.41
NME1NME1 HIS1P00498 297 aaKnown RBP6.21□□□□□ -1.42
NME1NME1 YCR025CP25352 136 aa6.21□□□□□ -1.42
NME1NME1 POF1P25576 258 aa6.21□□□□□ -1.42
NME1NME1 COY1P34237 679 aa6.21□□□□□ -1.42
NME1NME1 PRM9P39551 298 aa6.21□□□□□ -1.42
NME1NME1 YAR1P46683 200 aa6.21□□□□□ -1.42
NME1NME1 RNY1Q02933 434 aaKnown RBP6.21□□□□□ -1.42
NME1NME1 VPS60Q03390 229 aa6.21□□□□□ -1.42
NME1NME1 RPS3P05750 240 aaKnown RBP6.2□□□□□ -1.42
NME1NME1 POL30P15873 258 aaKnown RBP6.2□□□□□ -1.42
NME1NME1 RPT5P33297 434 aaKnown RBP6.2□□□□□ -1.42
NME1NME1 ACT1P60010 375 aaKnown RBP6.2□□□□□ -1.42
NME1NME1 YPL113CQ02961 396 aa6.2□□□□□ -1.42
NME1NME1 MRP1P10662 321 aaKnown RBP6.19□□□□□ -1.42
NME1NME1 NOP1P15646 327 aaKnown RBP6.19□□□□□ -1.42
NME1NME1 TRR2P38816 342 aa6.19□□□□□ -1.42
NME1NME1 SHC1P39000 512 aa6.19□□□□□ -1.42
NME1NME1 NPT1P39683 429 aaKnown RBP6.19□□□□□ -1.42
NME1NME1 SEN34P39707 275 aa6.19□□□□□ -1.42
NME1NME1 DDI1P40087 428 aa6.19□□□□□ -1.42
NME1NME1 ASG7P46993 209 aa6.19□□□□□ -1.42
NME1NME1 OST6Q03723 332 aa6.19□□□□□ -1.42
NME1NME1 ADH6Q04894 360 aaKnown RBP6.19□□□□□ -1.42
NME1NME1 CTR3Q06686 241 aa6.19□□□□□ -1.42
NME1NME1 AVT7P40501 490 aa6.18□□□□□ -1.42
NME1NME1 ALG11P53954 548 aaKnown RBP6.18□□□□□ -1.42
NME1NME1 SMD1Q02260 146 aaPredicted RBP6.18□□□□□ -1.42
NME1NME1 SEC10Q06245 871 aa6.18□□□□□ -1.42
NME1NME1 CTS2Q06350 511 aa6.18□□□□□ -1.42
NME1NME1 ARV1Q06541 321 aa6.18□□□□□ -1.42
NME1NME1 YAL063C-AQ3E791 96 aa6.18□□□□□ -1.42
NME1NME1 CPT1P17898 393 aa6.17□□□□□ -1.42
NME1NME1 DAL82P21705 255 aa6.17□□□□□ -1.42
NME1NME1 RRT12P25381 491 aa6.17□□□□□ -1.42
NME1NME1 PEX3P28795 441 aa6.17□□□□□ -1.42
NME1NME1 CDC14Q00684 551 aa6.17□□□□□ -1.42
NME1NME1 MRS2Q01926 470 aa6.17□□□□□ -1.42
NME1NME1 YLR173WQ06247 608 aa6.17□□□□□ -1.42
NME1NME1 YAL064W-BO13512 126 aa6.16□□□□□ -1.42
NME1NME1 MSF1P08425 469 aa6.16□□□□□ -1.42
NME1NME1 TIM21P53220 239 aa6.16□□□□□ -1.42
NME1NME1 HST4P53688 370 aa6.16□□□□□ -1.42
NME1NME1 YMR316C-AI2HB70 103 aa6.15□□□□□ -1.42
NME1NME1 CUP2P15315 225 aa6.15□□□□□ -1.42
NME1NME1 ATG12P38316 186 aa6.15□□□□□ -1.42
NME1NME1 MNT4P53745 580 aa6.15□□□□□ -1.42
NME1NME1 YDL144CQ07589 356 aa6.15□□□□□ -1.42
NME1NME1 YOS9Q99220 542 aa6.15□□□□□ -1.42
NME1NME1 ATG15P25641 520 aa6.14□□□□□ -1.43
NME1NME1 MED4Q12343 284 aa6.14□□□□□ -1.43
NME1NME1 RPP0P05317 312 aaKnown RBP6.13□□□□□ -1.43
NME1NME1 AVT6P40074 448 aa6.13□□□□□ -1.43
NME1NME1 RAD3P06839 778 aa6.12□□□□□ -1.43
NME1NME1 OSM1P21375 501 aaKnown RBP6.12□□□□□ -1.43
NME1NME1 CAM1P29547 415 aaKnown RBP6.12□□□□□ -1.43
NME1NME1 KRE6P32486 720 aa6.12□□□□□ -1.43
NME1NME1 BNA6P43619 295 aa6.12□□□□□ -1.43
NME1NME1 YNL134CP53912 376 aaKnown RBP6.12□□□□□ -1.43
NME1NME1 SME1Q12330 94 aaPredicted RBP6.12□□□□□ -1.43
NME1NME1 PHO80P20052 293 aa6.11□□□□□ -1.43
NME1NME1 TPS2P31688 896 aaKnown RBP6.11□□□□□ -1.43
NME1NME1 ALK2P32789 676 aaPredicted RBP6.11□□□□□ -1.43
NME1NME1 CAT2P32796 670 aaKnown RBP6.11□□□□□ -1.43
NME1NME1 SPT8P38915 602 aa6.11□□□□□ -1.43
NME1NME1 CWP1P28319 239 aa6.1□□□□□ -1.43
NME1NME1 YIR035CP40579 254 aa6.1□□□□□ -1.43
NME1NME1 YJR012CP47087 207 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms