RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C GPN3Q06543 272 aa7.48□□□□□ -1.21
SRP54YPR088C MDM32Q12171 622 aa7.48□□□□□ -1.21
SRP54YPR088C CDC31P06704 161 aaKnown RBP7.47□□□□□ -1.21
SRP54YPR088C SEC62P21825 274 aa7.47□□□□□ -1.21
SRP54YPR088C RPA135P22138 1203 aaKnown RBP7.47□□□□□ -1.21
SRP54YPR088C PUT3P25502 979 aaPredicted RBP7.47□□□□□ -1.21
SRP54YPR088C NUD1P32336 851 aa7.47□□□□□ -1.21
SRP54YPR088C PAU24P38155 120 aa7.47□□□□□ -1.21
SRP54YPR088C CWC23P52868 283 aaPredicted RBP7.47□□□□□ -1.21
SRP54YPR088C APM1Q00776 475 aaPredicted RBP7.47□□□□□ -1.21
SRP54YPR088C YPL039WQ03080 316 aa7.47□□□□□ -1.21
SRP54YPR088C YDR209CQ03480 137 aa7.47□□□□□ -1.21
SRP54YPR088C YPR147CQ06522 304 aaKnown RBP7.47□□□□□ -1.21
SRP54YPR088C IRA1P18963 3092 aa7.46□□□□□ -1.21
SRP54YPR088C DOA4P32571 926 aa7.46□□□□□ -1.21
SRP54YPR088C VPS17P32913 551 aa7.46□□□□□ -1.21
SRP54YPR088C ZRT3P34240 503 aa7.46□□□□□ -1.21
SRP54YPR088C REE1P40893 198 aa7.46□□□□□ -1.21
SRP54YPR088C POP1P41812 875 aa7.46□□□□□ -1.21
SRP54YPR088C PMT6P42934 759 aa7.46□□□□□ -1.21
SRP54YPR088C ECO1P43605 281 aa7.46□□□□□ -1.21
SRP54YPR088C IMD3P50095 523 aaKnown RBP7.46□□□□□ -1.21
SRP54YPR088C IMO32P53219 342 aa7.46□□□□□ -1.21
SRP54YPR088C YGR126WP53274 230 aa7.46□□□□□ -1.21
SRP54YPR088C SAY1P53324 424 aa7.46□□□□□ -1.21
SRP54YPR088C HOL1P53389 586 aa7.46□□□□□ -1.21
SRP54YPR088C PDR16P53860 351 aaKnown RBP7.46□□□□□ -1.21
SRP54YPR088C TDA1Q03533 586 aa7.46□□□□□ -1.21
SRP54YPR088C MIX14Q04341 121 aa7.46□□□□□ -1.21
SRP54YPR088C ERF2Q06551 359 aa7.46□□□□□ -1.21
SRP54YPR088C YLR099W-AQ3E798 87 aa7.46□□□□□ -1.21
SRP54YPR088C SUS1Q6WNK7 96 aa7.46□□□□□ -1.21
SRP54YPR088C MTR10Q99189 972 aa7.46□□□□□ -1.21
SRP54YPR088C YAL064W-BO13512 126 aa7.45□□□□□ -1.22
SRP54YPR088C QCR7P00128 127 aa7.45□□□□□ -1.22
SRP54YPR088C COX9P07255 59 aa7.45□□□□□ -1.22
SRP54YPR088C STE50P25344 346 aa7.45□□□□□ -1.22
SRP54YPR088C MBA1P38300 278 aa7.45□□□□□ -1.22
SRP54YPR088C YHK8P38776 514 aa7.45□□□□□ -1.22
SRP54YPR088C RTT105P40063 208 aa7.45□□□□□ -1.22
SRP54YPR088C SHO1P40073 367 aa7.45□□□□□ -1.22
SRP54YPR088C SER2P42941 309 aa7.45□□□□□ -1.22
SRP54YPR088C PMT5P52867 743 aa7.45□□□□□ -1.22
SRP54YPR088C SDC1Q03323 175 aa7.45□□□□□ -1.22
SRP54YPR088C BNA7Q04066 261 aa7.45□□□□□ -1.22
SRP54YPR088C HLR1Q04429 423 aa7.45□□□□□ -1.22
SRP54YPR088C BRE4Q07660 1125 aa7.45□□□□□ -1.22
SRP54YPR088C PEX27Q08580 376 aa7.45□□□□□ -1.22
SRP54YPR088C YOR378WQ08902 515 aa7.45□□□□□ -1.22
SRP54YPR088C GRE1Q08969 168 aa7.45□□□□□ -1.22
SRP54YPR088C BAG7Q12128 409 aa7.45□□□□□ -1.22
SRP54YPR088C SFG1Q12507 346 aa7.45□□□□□ -1.22
SRP54YPR088C YBL113CQ7M4S9 792 aa7.45□□□□□ -1.22
SRP54YPR088C OPI3P05375 206 aa7.45□□□□□ -1.22
SRP54YPR088C PBS2P08018 668 aa7.45□□□□□ -1.22
SRP54YPR088C MRP1P10662 321 aaKnown RBP7.45□□□□□ -1.22
SRP54YPR088C PDX1P16451 410 aa7.45□□□□□ -1.22
SRP54YPR088C BOS1P25385 244 aa7.45□□□□□ -1.22
SRP54YPR088C CCZ1P38273 704 aa7.45□□□□□ -1.22
SRP54YPR088C PAM16P42949 149 aa7.45□□□□□ -1.22
SRP54YPR088C NIT2P47016 307 aa7.45□□□□□ -1.22
SRP54YPR088C VBA4Q04602 768 aaKnown RBP7.45□□□□□ -1.22
SRP54YPR088C YMR252CQ04814 134 aa7.45□□□□□ -1.22
SRP54YPR088C RBS1Q05672 457 aaKnown RBP7.45□□□□□ -1.22
SRP54YPR088C YOL024WQ08172 172 aa7.45□□□□□ -1.22
SRP54YPR088C MIM1Q08176 113 aa7.45□□□□□ -1.22
SRP54YPR088C RCN2Q12044 265 aa7.45□□□□□ -1.22
SRP54YPR088C RPS13P05756 151 aaKnown RBP7.44□□□□□ -1.22
SRP54YPR088C PDE2P06776 526 aa7.44□□□□□ -1.22
SRP54YPR088C YFR010W-AP0C5N0 62 aa7.44□□□□□ -1.22
SRP54YPR088C CTA1P15202 515 aa7.44□□□□□ -1.22
SRP54YPR088C CPR2P23285 205 aa7.44□□□□□ -1.22
SRP54YPR088C PPA2P28239 310 aa7.44□□□□□ -1.22
SRP54YPR088C THI4P32318 326 aa7.44□□□□□ -1.22
SRP54YPR088C SHE2P36068 246 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
SRP54YPR088C APD1P38281 316 aa7.44□□□□□ -1.22
SRP54YPR088C YCK3P39962 524 aa7.44□□□□□ -1.22
SRP54YPR088C ATG18P43601 500 aa7.44□□□□□ -1.22
SRP54YPR088C YJL055WP47044 245 aa7.44□□□□□ -1.22
SRP54YPR088C CCC1P47818 322 aa7.44□□□□□ -1.22
SRP54YPR088C MSS11Q03825 758 aa7.44□□□□□ -1.22
SRP54YPR088C AGE1Q04412 482 aa7.44□□□□□ -1.22
SRP54YPR088C NIP7Q08962 181 aaKnown RBP7.44□□□□□ -1.22
SRP54YPR088C YPL278CQ08990 100 aa7.44□□□□□ -1.22
SRP54YPR088C UTR1P21373 530 aa7.43□□□□□ -1.22
SRP54YPR088C NFS1P25374 497 aa7.43□□□□□ -1.22
SRP54YPR088C MCM10P32354 571 aa7.43□□□□□ -1.22
SRP54YPR088C MTH1P35198 433 aa7.43□□□□□ -1.22
SRP54YPR088C SRP102P36057 244 aaPredicted RBP7.43□□□□□ -1.22
SRP54YPR088C YBR137WP38276 179 aa7.43□□□□□ -1.22
SRP54YPR088C IPI1P38803 334 aaPredicted RBP7.43□□□□□ -1.22
SRP54YPR088C CHS7P38843 316 aa7.43□□□□□ -1.22
SRP54YPR088C RFC4P40339 323 aaKnown RBP7.43□□□□□ -1.22
SRP54YPR088C SEC24P40482 926 aaKnown RBP7.43□□□□□ -1.22
SRP54YPR088C MRH4P53166 561 aa7.43□□□□□ -1.22
SRP54YPR088C PBP1P53297 722 aaKnown RBP7.43□□□□□ -1.22
SRP54YPR088C ATG4P53867 494 aa7.43□□□□□ -1.22
SRP54YPR088C YKR005CQ02203 525 aa7.43□□□□□ -1.22
SRP54YPR088C RSM28Q03430 361 aa7.43□□□□□ -1.22
SRP54YPR088C MRX8Q05473 314 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms