RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A YNL040WP53960 456 aaPredicted RBP3.66□□□□□ -1.82
YNL054W-AYNL054W-A MRX11Q03079 207 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A YMR209CQ03648 457 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A SCW10Q04951 389 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A MMT2Q08970 484 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A POM33Q12164 279 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A YPL245WQ12179 454 aaKnown RBP3.66□□□□□ -1.82
YNL054W-AYNL054W-A YPR064WQ12492 139 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A BGL2P15703 313 aaKnown RBP3.65□□□□□ -1.83
YNL054W-AYNL054W-A MRPL20P22354 195 aaPredicted RBP3.65□□□□□ -1.83
YNL054W-AYNL054W-A CWP1P28319 239 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
YNL054W-AYNL054W-A GPI18P38211 433 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A EFM1P38732 585 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A NRM1P53718 249 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A INP2Q03824 705 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A GMC1Q04399 608 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A PAL1Q05518 499 aaKnown RBP3.65□□□□□ -1.83
YNL054W-AYNL054W-A BOP2Q06150 570 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A PEX30Q06169 523 aa3.65□□□□□ -1.83
YNL054W-AYNL054W-A TMC1Q08422 150 aaPredicted RBP3.65□□□□□ -1.83
YNL054W-AYNL054W-A ILV1P00927 576 aaKnown RBP3.64□□□□□ -1.83
YNL054W-AYNL054W-A MET16P18408 261 aaPredicted RBP3.64□□□□□ -1.83
YNL054W-AYNL054W-A RRT12P25381 491 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A SPT4P32914 102 aaPredicted RBP3.64□□□□□ -1.83
YNL054W-AYNL054W-A SMP1P38128 452 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A TDA11P38854 504 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A RRG9P40156 214 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A TPN1P53099 579 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A CPD1P53314 239 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A SRL4Q03085 281 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A SRO7Q12038 1033 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A YOR114WQ12219 294 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A RRP42Q12277 265 aaPredicted RBP3.64□□□□□ -1.83
YNL054W-AYNL054W-A LAG2Q92325 660 aa3.64□□□□□ -1.83
YNL054W-AYNL054W-A RPP0P05317 312 aaKnown RBP3.63□□□□□ -1.83
YNL054W-AYNL054W-A IFM1P25038 676 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A ARO4P32449 370 aaKnown RBP3.63□□□□□ -1.83
YNL054W-AYNL054W-A AEP1P32493 518 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A YHR045WP38775 560 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A GGC1P38988 300 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A YIA6P40556 373 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A IBA57P47158 497 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A YPS5P53057 165 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A KTR6P54070 446 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A MRPS16Q02608 121 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A ARV1Q06541 321 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A YOR292CQ08743 309 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A MED4Q12343 284 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A ATG31Q12421 196 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A YOL085CQ99345 113 aa3.63□□□□□ -1.83
YNL054W-AYNL054W-A HSP26P15992 214 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
YNL054W-AYNL054W-A POF1P25576 258 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A IES6P32617 166 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A YOX1P34161 385 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A HSM3P38348 480 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A TIM21P53220 239 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A TRM44Q02648 567 aaKnown RBP3.62□□□□□ -1.83
YNL054W-AYNL054W-A RPL21AQ02753 160 aaKnown RBP3.62□□□□□ -1.83
YNL054W-AYNL054W-A VHS1Q03785 461 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A API2Q04413 109 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A DPP1Q05521 289 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A LOA1Q06508 300 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A RLP24Q07915 199 aaKnown RBP3.62□□□□□ -1.83
YNL054W-AYNL054W-A BSC6Q08280 497 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A BTS1Q12051 335 aa3.62□□□□□ -1.83
YNL054W-AYNL054W-A PET494P07390 489 aaPredicted RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A CSE1P33307 960 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A RFT1P38206 574 aaPredicted RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A MBA1P38300 278 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A SDS24P38314 527 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A BIG1P38813 335 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A LIA1P47120 325 aaKnown RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A YGR018CP53211 109 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A MNT4P53745 580 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A ALG11P53954 548 aaKnown RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A OST6Q03723 332 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A SEC13Q04491 297 aaKnown RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A SDO1Q07953 250 aaKnown RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A RAX2Q12465 1220 aa3.61□□□□□ -1.83
YNL054W-AYNL054W-A FOL3Q12676 427 aaPredicted RBP3.61□□□□□ -1.83
YNL054W-AYNL054W-A DAL81P21657 970 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A DAL82P21705 255 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A LDB16P25587 256 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A SUA5P32579 426 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A PRS4P38063 326 aaPredicted RBP3.6□□□□□ -1.83
YNL054W-AYNL054W-A DDI1P40087 428 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A FMC1P40491 155 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A BNA6P43619 295 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A YML018CQ03730 393 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A TAF9Q05027 157 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A SFH1Q06168 426 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A YOR029WQ12243 111 aa3.6□□□□□ -1.83
YNL054W-AYNL054W-A ADH1P00330 348 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A TPI1P00942 248 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A RPS3P05750 240 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A RAD3P06839 778 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A CBP6P07253 162 aaPredicted RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A VPS1P21576 704 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A PCL1P24867 279 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms