RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C YGR018CP53211 109 aa1.77□□□□□ -2.13
SOK2YMR016C PXR1P53335 271 aaPredicted RBP1.77□□□□□ -2.13
SOK2YMR016C EGD1Q02642 157 aaKnown RBP1.77□□□□□ -2.13
SOK2YMR016C MHR1Q06630 226 aa1.77□□□□□ -2.13
SOK2YMR016C YLR413WQ06689 675 aa1.77□□□□□ -2.13
SOK2YMR016C YLL007CQ07799 665 aa1.77□□□□□ -2.13
SOK2YMR016C TMC1Q08422 150 aaPredicted RBP1.77□□□□□ -2.13
SOK2YMR016C SFM1Q12314 213 aa1.77□□□□□ -2.13
SOK2YMR016C GIS3Q12418 502 aa1.77□□□□□ -2.13
SOK2YMR016C EAF3Q12432 401 aa1.77□□□□□ -2.13
SOK2YMR016C FRS2P15625 503 aaKnown RBP1.77□□□□□ -2.13
SOK2YMR016C UGA1P17649 471 aa1.77□□□□□ -2.13
SOK2YMR016C DCC1P25559 380 aa1.77□□□□□ -2.13
SOK2YMR016C RTR1P40084 226 aaPredicted RBP1.77□□□□□ -2.13
SOK2YMR016C GAB1P41733 394 aa1.77□□□□□ -2.13
SOK2YMR016C YJR054WP47114 497 aa1.77□□□□□ -2.13
SOK2YMR016C PRP38Q00723 242 aaPredicted RBP1.77□□□□□ -2.13
SOK2YMR016C RNY1Q02933 434 aaKnown RBP1.77□□□□□ -2.13
SOK2YMR016C YET2Q04210 160 aa1.77□□□□□ -2.13
SOK2YMR016C FAR10Q06001 478 aa1.77□□□□□ -2.13
SOK2YMR016C CMS1Q07897 291 aaKnown RBP1.77□□□□□ -2.13
SOK2YMR016C TUS1Q06412 1307 aa1.76□□□□□ -2.13
SOK2YMR016C CDC42P19073 191 aa1.76□□□□□ -2.13
SOK2YMR016C DAL2P25335 343 aa1.76□□□□□ -2.13
SOK2YMR016C ARO4P32449 370 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C NUP2P32499 720 aa1.76□□□□□ -2.13
SOK2YMR016C PRS1P32895 427 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C YBR062CP38239 180 aa1.76□□□□□ -2.13
SOK2YMR016C DSE1P40077 573 aa1.76□□□□□ -2.13
SOK2YMR016C YJR030CP47101 745 aa1.76□□□□□ -2.13
SOK2YMR016C YNL146WP53906 100 aa1.76□□□□□ -2.13
SOK2YMR016C YNL134CP53912 376 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C YLR152CP54072 576 aa1.76□□□□□ -2.13
SOK2YMR016C RMI1Q02685 241 aa1.76□□□□□ -2.13
SOK2YMR016C YPL080CQ02826 108 aa1.76□□□□□ -2.13
SOK2YMR016C SRL4Q03085 281 aa1.76□□□□□ -2.13
SOK2YMR016C PAL1Q05518 499 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C DNL4Q08387 944 aaPredicted RBP1.76□□□□□ -2.13
SOK2YMR016C JID1Q12350 301 aa1.76□□□□□ -2.13
SOK2YMR016C PFK27Q12471 397 aaPredicted RBP1.76□□□□□ -2.13
SOK2YMR016C MEX67Q99257 599 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C TEL1P38110 2787 aa1.76□□□□□ -2.13
SOK2YMR016C PRP8P33334 2413 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C HHF1P02309 103 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C VPS3P23643 1011 aa1.76□□□□□ -2.13
SOK2YMR016C RPL16AP26784 199 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C COT1P32798 439 aa1.76□□□□□ -2.13
SOK2YMR016C PAD1P33751 242 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SOK2YMR016C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SOK2YMR016C YKR015CP36111 568 aa1.76□□□□□ -2.13
SOK2YMR016C MRPL10P36520 322 aa1.76□□□□□ -2.13
SOK2YMR016C SHE1P38200 338 aa1.76□□□□□ -2.13
SOK2YMR016C TIM17P39515 158 aa1.76□□□□□ -2.13
SOK2YMR016C RBG1P39729 369 aa1.76□□□□□ -2.13
SOK2YMR016C OXA1P39952 402 aa1.76□□□□□ -2.13
SOK2YMR016C PRE5P40302 234 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C OTU1P43558 301 aa1.76□□□□□ -2.13
SOK2YMR016C BIR1P47134 954 aa1.76□□□□□ -2.13
SOK2YMR016C CDH1P53197 566 aa1.76□□□□□ -2.13
SOK2YMR016C EFM5P53200 248 aaKnown RBP1.76□□□□□ -2.13
SOK2YMR016C TRM112P53738 135 aaPredicted RBP1.76□□□□□ -2.13
SOK2YMR016C GIM3P53900 129 aa1.76□□□□□ -2.13
SOK2YMR016C MTQ1P53944 314 aa1.76□□□□□ -2.13
SOK2YMR016C YDL109CQ12103 647 aa1.76□□□□□ -2.13
SOK2YMR016C PCL9Q12477 304 aa1.76□□□□□ -2.13
SOK2YMR016C DCP1Q12517 231 aaPredicted RBP1.76□□□□□ -2.13
SOK2YMR016C NAG1Q8TGN9 163 aa1.76□□□□□ -2.13
SOK2YMR016C TY4B-HP0C2J7 1802 aa1.76□□□□□ -2.13
SOK2YMR016C FAB1P34756 2278 aa1.75□□□□□ -2.13
SOK2YMR016C CDC36P06100 191 aaPredicted RBP1.75□□□□□ -2.13
SOK2YMR016C MSF1P08425 469 aa1.75□□□□□ -2.13
SOK2YMR016C PDC2P32896 925 aa1.75□□□□□ -2.13
SOK2YMR016C MRPL37P36532 105 aa1.75□□□□□ -2.13
SOK2YMR016C ECM8P38246 354 aa1.75□□□□□ -2.13
SOK2YMR016C TAE1P38340 232 aa1.75□□□□□ -2.13
SOK2YMR016C SIP3P38717 1229 aa1.75□□□□□ -2.13
SOK2YMR016C SHQ1P40486 507 aaPredicted RBP1.75□□□□□ -2.13
SOK2YMR016C HAM1P47119 197 aaKnown RBP1.75□□□□□ -2.13
SOK2YMR016C GTO1P48239 356 aa1.75□□□□□ -2.13
SOK2YMR016C YGR168CP53293 376 aa1.75□□□□□ -2.13
SOK2YMR016C RTC4P53850 401 aa1.75□□□□□ -2.13
SOK2YMR016C YNL040WP53960 456 aaPredicted RBP1.75□□□□□ -2.13
SOK2YMR016C RVB1Q03940 463 aaKnown RBP1.75□□□□□ -2.13
SOK2YMR016C YLR173WQ06247 608 aa1.75□□□□□ -2.13
SOK2YMR016C YLR012CQ07927 99 aa1.75□□□□□ -2.13
SOK2YMR016C ATG31Q12421 196 aa1.75□□□□□ -2.13
SOK2YMR016C SSA3P09435 649 aaKnown RBP1.74□□□□□ -2.13
SOK2YMR016C SPS100P13130 326 aa1.74□□□□□ -2.13
SOK2YMR016C RAD5P32849 1169 aaPredicted RBP1.74□□□□□ -2.13
SOK2YMR016C IMP3P32899 183 aaPredicted RBP1.74□□□□□ -2.13
SOK2YMR016C YPC1P38298 316 aa1.74□□□□□ -2.13
SOK2YMR016C PFS1P38872 237 aa1.74□□□□□ -2.13
SOK2YMR016C YER085CP40058 173 aa1.74□□□□□ -2.13
SOK2YMR016C UTP25P40498 721 aaKnown RBP1.74□□□□□ -2.13
SOK2YMR016C GDS1P41913 522 aa1.74□□□□□ -2.13
SOK2YMR016C AIM23P47015 356 aa1.74□□□□□ -2.13
SOK2YMR016C MND1P53102 219 aa1.74□□□□□ -2.13
SOK2YMR016C YGR015CP53208 328 aa1.74□□□□□ -2.13
SOK2YMR016C PGA2P53903 129 aa1.74□□□□□ -2.13
SOK2YMR016C UBX2Q04228 584 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms