RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W BI3Q9ZZW7 517 aa2.11□□□□□ -2.07
PDP3YLR455W IKI3Q06706 1349 aaKnown RBP2.11□□□□□ -2.07
PDP3YLR455W CTA1P15202 515 aa2.1□□□□□ -2.07
PDP3YLR455W MSS116P15424 664 aaKnown RBP2.1□□□□□ -2.07
PDP3YLR455W RBK1P25332 333 aa2.1□□□□□ -2.07
PDP3YLR455W VMA5P31412 392 aaKnown RBP2.1□□□□□ -2.07
PDP3YLR455W SKG6P32900 734 aaPredicted RBP2.1□□□□□ -2.07
PDP3YLR455W PMT4P46971 762 aa2.1□□□□□ -2.07
PDP3YLR455W SDS23P53172 527 aa2.1□□□□□ -2.07
PDP3YLR455W PXR1P53335 271 aaPredicted RBP2.1□□□□□ -2.07
PDP3YLR455W HCH1P53834 153 aa2.1□□□□□ -2.07
PDP3YLR455W YNL146WP53906 100 aa2.1□□□□□ -2.07
PDP3YLR455W MGR3Q04472 501 aa2.1□□□□□ -2.07
PDP3YLR455W ECM19Q06011 112 aa2.1□□□□□ -2.07
PDP3YLR455W YPR195CQ06594 109 aa2.1□□□□□ -2.07
PDP3YLR455W RDL2Q08742 149 aaKnown RBP2.1□□□□□ -2.07
PDP3YLR455W YPS3Q12303 508 aa2.1□□□□□ -2.07
PDP3YLR455W DFM1Q12743 341 aaKnown RBP2.1□□□□□ -2.07
PDP3YLR455W CUP2P15315 225 aa2.09□□□□□ -2.07
PDP3YLR455W TPM1P17536 199 aaKnown RBP2.09□□□□□ -2.07
PDP3YLR455W SRB2P34162 210 aa2.09□□□□□ -2.07
PDP3YLR455W KTI12P34253 313 aaKnown RBP2.09□□□□□ -2.07
PDP3YLR455W RFT1P38206 574 aaPredicted RBP2.09□□□□□ -2.07
PDP3YLR455W SPO73P40031 143 aa2.09□□□□□ -2.07
PDP3YLR455W YFL040WP43562 540 aa2.09□□□□□ -2.07
PDP3YLR455W SHE4P51534 789 aa2.09□□□□□ -2.07
PDP3YLR455W YGR016WP53209 190 aa2.09□□□□□ -2.07
PDP3YLR455W NRM1P53718 249 aa2.09□□□□□ -2.07
PDP3YLR455W SMD1Q02260 146 aaPredicted RBP2.09□□□□□ -2.07
PDP3YLR455W UBX2Q04228 584 aa2.09□□□□□ -2.07
PDP3YLR455W UTP15Q04305 513 aaKnown RBP2.09□□□□□ -2.07
PDP3YLR455W PGC1Q08959 321 aa2.09□□□□□ -2.07
PDP3YLR455W KRE5P22023 1365 aa2.09□□□□□ -2.08
PDP3YLR455W MHP1P43638 1398 aa2.09□□□□□ -2.08
PDP3YLR455W ROM2P51862 1356 aaKnown RBP2.09□□□□□ -2.08
PDP3YLR455W ITR2P30606 609 aa2.08□□□□□ -2.08
PDP3YLR455W AST1P35183 429 aa2.08□□□□□ -2.08
PDP3YLR455W BDH1P39714 382 aa2.08□□□□□ -2.08
PDP3YLR455W INA22P40576 216 aa2.08□□□□□ -2.08
PDP3YLR455W RPN14P53196 417 aa2.08□□□□□ -2.08
PDP3YLR455W RVB1Q03940 463 aaKnown RBP2.08□□□□□ -2.08
PDP3YLR455W SPO24Q3E752 67 aa2.08□□□□□ -2.08
PDP3YLR455W RRP5Q05022 1729 aaKnown RBP2.08□□□□□ -2.08
PDP3YLR455W VMA2P16140 517 aaKnown RBP2.07□□□□□ -2.08
PDP3YLR455W CPT1P17898 393 aa2.07□□□□□ -2.08
PDP3YLR455W RPB9P27999 122 aa2.07□□□□□ -2.08
PDP3YLR455W SMI1P32566 505 aa2.07□□□□□ -2.08
PDP3YLR455W ZRT3P34240 503 aa2.07□□□□□ -2.08
PDP3YLR455W INP1Q03694 420 aa2.07□□□□□ -2.08
PDP3YLR455W STE23Q06010 1027 aa2.07□□□□□ -2.08
PDP3YLR455W YDL211CQ12121 372 aa2.07□□□□□ -2.08
PDP3YLR455W YPL245WQ12179 454 aaKnown RBP2.07□□□□□ -2.08
PDP3YLR455W RFM1Q12192 310 aa2.07□□□□□ -2.08
PDP3YLR455W TRM10Q12400 293 aa2.07□□□□□ -2.08
PDP3YLR455W RAD9P14737 1309 aa2.07□□□□□ -2.08
PDP3YLR455W SPT7P35177 1332 aa2.07□□□□□ -2.08
PDP3YLR455W RPL18AP0CX49 186 aaKnown RBP2.06□□□□□ -2.08
PDP3YLR455W RPL18BP0CX50 186 aaKnown RBP2.06□□□□□ -2.08
PDP3YLR455W GAL3P13045 520 aa2.06□□□□□ -2.08
PDP3YLR455W VPH2P32341 215 aa2.06□□□□□ -2.08
PDP3YLR455W MEI5P32489 222 aa2.06□□□□□ -2.08
PDP3YLR455W DSE1P40077 573 aa2.06□□□□□ -2.08
PDP3YLR455W SLM1P40485 686 aa2.06□□□□□ -2.08
PDP3YLR455W YIL054WP40524 105 aa2.06□□□□□ -2.08
PDP3YLR455W FMP48P53233 369 aa2.06□□□□□ -2.08
PDP3YLR455W ACT1P60010 375 aaKnown RBP2.06□□□□□ -2.08
PDP3YLR455W VPS20Q04272 221 aa2.06□□□□□ -2.08
PDP3YLR455W MIM1Q08176 113 aa2.06□□□□□ -2.08
PDP3YLR455W PRP46Q12417 451 aaPredicted RBP2.06□□□□□ -2.08
PDP3YLR455W HPR1P17629 752 aaKnown RBP2.05□□□□□ -2.08
PDP3YLR455W YMR262WP38430 313 aa2.05□□□□□ -2.08
PDP3YLR455W YHR035WP38769 630 aa2.05□□□□□ -2.08
PDP3YLR455W CTM1P38818 585 aa2.05□□□□□ -2.08
PDP3YLR455W UTP25P40498 721 aaKnown RBP2.05□□□□□ -2.08
PDP3YLR455W YMR244WQ04018 355 aa2.05□□□□□ -2.08
PDP3YLR455W YDR286CQ05530 114 aa2.05□□□□□ -2.08
PDP3YLR455W YPL264CQ08980 353 aa2.05□□□□□ -2.08
PDP3YLR455W RSF2P46974 1380 aa2.05□□□□□ -2.08
PDP3YLR455W CDC37P06101 506 aaKnown RBP2.04□□□□□ -2.08
PDP3YLR455W OPI1P21957 404 aa2.04□□□□□ -2.08
PDP3YLR455W PET18P25362 215 aa2.04□□□□□ -2.08
PDP3YLR455W INO2P26798 304 aa2.04□□□□□ -2.08
PDP3YLR455W ASP1P38986 381 aaPredicted RBP2.04□□□□□ -2.08
PDP3YLR455W SOP4P39543 234 aaPredicted RBP2.04□□□□□ -2.08
PDP3YLR455W CDC40P40968 455 aaPredicted RBP2.04□□□□□ -2.08
PDP3YLR455W HIT1P46973 164 aa2.04□□□□□ -2.08
PDP3YLR455W OKP1P53298 406 aa2.04□□□□□ -2.08
PDP3YLR455W YNR066CP53752 436 aa2.04□□□□□ -2.08
PDP3YLR455W IGO1P53897 168 aa2.04□□□□□ -2.08
PDP3YLR455W PRO2P54885 456 aaKnown RBP2.04□□□□□ -2.08
PDP3YLR455W SGT2Q12118 346 aaKnown RBP2.04□□□□□ -2.08
PDP3YLR455W ERP3Q12403 225 aa2.04□□□□□ -2.08
PDP3YLR455W TY3B-IQ7LHG5 1498 aaKnown RBP2.04□□□□□ -2.08
PDP3YLR455W YLR419WQ06698 1435 aaKnown RBP2.03□□□□□ -2.08
PDP3YLR455W FLO11P08640 1367 aa2.03□□□□□ -2.08
PDP3YLR455W ADE6P38972 1358 aaKnown RBP2.03□□□□□ -2.08
PDP3YLR455W KRR1P25586 316 aaPredicted RBP2.03□□□□□ -2.08
PDP3YLR455W ARO4P32449 370 aaKnown RBP2.03□□□□□ -2.08
PDP3YLR455W ECM14P38836 430 aa2.03□□□□□ -2.08
PDP3YLR455W PET8P38921 284 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms