RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C SUL2Q12325 893 aa4.07□□□□□ -1.76
CDC42YLR229C PRM4Q12498 284 aa4.07□□□□□ -1.76
CDC42YLR229C CMC2Q3E7A4 109 aa4.07□□□□□ -1.76
CDC42YLR229C CET1O13297 549 aaPredicted RBP4.06□□□□□ -1.76
CDC42YLR229C MDM35O60200 86 aa4.06□□□□□ -1.76
CDC42YLR229C TDH1P00360 332 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C SEC12P11655 471 aa4.06□□□□□ -1.76
CDC42YLR229C STE12P13574 688 aa4.06□□□□□ -1.76
CDC42YLR229C CDC26P14724 124 aa4.06□□□□□ -1.76
CDC42YLR229C CDC23P16522 626 aa4.06□□□□□ -1.76
CDC42YLR229C PHO80P20052 293 aa4.06□□□□□ -1.76
CDC42YLR229C FEN2P25621 512 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C LDS1P31379 325 aa4.06□□□□□ -1.76
CDC42YLR229C NDC1P32500 655 aa4.06□□□□□ -1.76
CDC42YLR229C YKL097CP34245 136 aa4.06□□□□□ -1.76
CDC42YLR229C CPR5P35176 225 aa4.06□□□□□ -1.76
CDC42YLR229C TMA19P35691 167 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C MRPL36P36531 177 aa4.06□□□□□ -1.76
CDC42YLR229C RRN10P38204 145 aa4.06□□□□□ -1.76
CDC42YLR229C CDS1P38221 457 aa4.06□□□□□ -1.76
CDC42YLR229C SDH8P38345 138 aa4.06□□□□□ -1.76
CDC42YLR229C DED81P38707 554 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C RRP4P38792 359 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C ALP1P38971 573 aa4.06□□□□□ -1.76
CDC42YLR229C SSO2P39926 295 aa4.06□□□□□ -1.76
CDC42YLR229C VRG4P40107 337 aa4.06□□□□□ -1.76
CDC42YLR229C RFC4P40339 323 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C APQ12P40532 138 aa4.06□□□□□ -1.76
CDC42YLR229C MAD2P40958 196 aa4.06□□□□□ -1.76
CDC42YLR229C BUD8P41698 603 aa4.06□□□□□ -1.76
CDC42YLR229C IDP2P41939 412 aa4.06□□□□□ -1.76
CDC42YLR229C PSA1P41940 361 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C PFS2P42841 465 aaKnown RBP4.06□□□□□ -1.76
CDC42YLR229C AIM25P47140 327 aa4.06□□□□□ -1.76
CDC42YLR229C STE24P47154 453 aa4.06□□□□□ -1.76
CDC42YLR229C AAD10P47182 288 aa4.06□□□□□ -1.76
CDC42YLR229C PHB2P50085 310 aa4.06□□□□□ -1.76
CDC42YLR229C COS10P52924 374 aa4.06□□□□□ -1.76
CDC42YLR229C SDT1P53078 280 aa4.06□□□□□ -1.76
CDC42YLR229C SGF73P53165 657 aa4.06□□□□□ -1.76
CDC42YLR229C ERV29P53337 310 aa4.06□□□□□ -1.76
CDC42YLR229C HHO1P53551 258 aa4.06□□□□□ -1.76
CDC42YLR229C GIM3P53900 129 aa4.06□□□□□ -1.76
CDC42YLR229C OAZ1Q02803 292 aa4.06□□□□□ -1.76
CDC42YLR229C VID22Q05934 901 aa4.06□□□□□ -1.76
CDC42YLR229C TPO3Q06451 622 aa4.06□□□□□ -1.76
CDC42YLR229C IPK1Q06667 281 aa4.06□□□□□ -1.76
CDC42YLR229C TEN1Q07921 160 aa4.06□□□□□ -1.76
CDC42YLR229C FMP40Q08968 688 aaPredicted RBP4.06□□□□□ -1.76
CDC42YLR229C ATP14Q12349 124 aa4.06□□□□□ -1.76
CDC42YLR229C PSF1Q12488 208 aa4.06□□□□□ -1.76
CDC42YLR229C SIR2P06700 562 aa4.05□□□□□ -1.76
CDC42YLR229C NHP6BP11633 99 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C MER1P16523 270 aa4.05□□□□□ -1.76
CDC42YLR229C FUS3P16892 353 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C PET9P18239 318 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C ERD2P18414 219 aa4.05□□□□□ -1.76
CDC42YLR229C SCO2P38072 301 aa4.05□□□□□ -1.76
CDC42YLR229C ZTA1P38230 334 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C TRM7P38238 310 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C MET30P39014 640 aa4.05□□□□□ -1.76
CDC42YLR229C FMC1P40491 155 aa4.05□□□□□ -1.76
CDC42YLR229C MNT3P40549 630 aa4.05□□□□□ -1.76
CDC42YLR229C SSU1P41930 458 aa4.05□□□□□ -1.76
CDC42YLR229C PAC10P48363 199 aa4.05□□□□□ -1.76
CDC42YLR229C VOA1P53262 265 aa4.05□□□□□ -1.76
CDC42YLR229C SUN4P53616 420 aa4.05□□□□□ -1.76
CDC42YLR229C YNR061CP53747 219 aa4.05□□□□□ -1.76
CDC42YLR229C KAP120Q02932 1032 aa4.05□□□□□ -1.76
CDC42YLR229C RIM13Q03792 727 aa4.05□□□□□ -1.76
CDC42YLR229C SPC19Q03954 165 aa4.05□□□□□ -1.76
CDC42YLR229C RRP45Q05636 305 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C YLR173WQ06247 608 aa4.05□□□□□ -1.76
CDC42YLR229C YFT2Q06676 274 aa4.05□□□□□ -1.76
CDC42YLR229C SSK1Q07084 712 aa4.05□□□□□ -1.76
CDC42YLR229C YLR036CQ07986 203 aa4.05□□□□□ -1.76
CDC42YLR229C YOR289WQ12012 251 aaPredicted RBP4.05□□□□□ -1.76
CDC42YLR229C PUS9Q12069 462 aa4.05□□□□□ -1.76
CDC42YLR229C YLR108CQ12259 485 aa4.05□□□□□ -1.76
CDC42YLR229C YOL114CQ12322 202 aa4.05□□□□□ -1.76
CDC42YLR229C YRM1Q12340 786 aa4.05□□□□□ -1.76
CDC42YLR229C RKM5Q12367 367 aa4.05□□□□□ -1.76
CDC42YLR229C TRM13Q12383 476 aa4.05□□□□□ -1.76
CDC42YLR229C PCL9Q12477 304 aa4.05□□□□□ -1.76
CDC42YLR229C RRP12Q12754 1228 aaKnown RBP4.05□□□□□ -1.76
CDC42YLR229C STE7P06784 515 aa4.04□□□□□ -1.76
CDC42YLR229C BAR1P12630 587 aa4.04□□□□□ -1.76
CDC42YLR229C SCL1P21243 252 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C UTR1P21373 530 aa4.04□□□□□ -1.76
CDC42YLR229C PRE7P23724 241 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C RNA14P25298 677 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C IDH1P28834 360 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
CDC42YLR229C PRE4P30657 266 aa4.04□□□□□ -1.76
CDC42YLR229C YBL010CP32788 280 aa4.04□□□□□ -1.76
CDC42YLR229C LHP1P33399 275 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C MRPL37P36532 105 aa4.04□□□□□ -1.76
CDC42YLR229C ASC1P38011 319 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C RPS20P38701 121 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C RRP3P38712 501 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C YHR177WP38867 453 aa4.04□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms