RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	TEF1	P02994	458 aa	Known RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	CAR2	P07991	424 aa	Known RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	MSS116	P15424	664 aa	Known RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	DBR1	P24309	405 aa	Known RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	MEK1	P24719	497 aa	Predicted RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	CTR86	P25355	563 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	NAM9	P27929	486 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	ACH1	P32316	526 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	SCO2	P38072	301 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	STP2	P38704	541 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	NPT1	P39683	429 aa	Known RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	RSN1	Q03516	953 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	BET5	Q03630	159 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	YMR114C	Q04471	368 aa	Known RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	ECI1	Q05871	280 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	SKI7	Q08491	747 aa	Predicted RBP	5.74	□□□□□ -1.49
TIF1	YKR059W	RBD2	Q12270	262 aa		5.74	□□□□□ -1.49
TIF1	YKR059W	RPL18A	P0CX49	186 aa	Known RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	RPL18B	P0CX50	186 aa	Known RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	GPA2	P10823	449 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	ATG15	P25641	520 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	MKK1	P32490	508 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	RAD23	P32628	398 aa	Known RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	HOT13	P36078	116 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	YBR062C	P38239	180 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	RCY1	P39531	840 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	FRT2	P39734	528 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	YER034W	P40022	185 aa	Known RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	UTP25	P40498	721 aa	Known RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	CUP9	P41817	306 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	GCN20	P43535	752 aa	Known RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	YFL012W	P43580	148 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	BOL2	P53082	120 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	YGL185C	P53100	379 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	CGR1	P53188	120 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	YNL181W	P53878	407 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	PRP38	Q00723	242 aa	Predicted RBP	5.73	□□□□□ -1.49
TIF1	YKR059W	YPL068C	Q02749	293 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	MUM3	Q08750	479 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	PST1	Q12355	444 aa		5.73	□□□□□ -1.49
TIF1	YKR059W	TPK3	P05986	398 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	RPB4	P20433	221 aa	Predicted RBP	5.72	□□□□□ -1.49
TIF1	YKR059W	MGT1	P26188	188 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	RPS27A	P35997	82 aa	Known RBP	5.72	□□□□□ -1.49
TIF1	YKR059W	YCR041W	P37265	110 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	YPK3	P38070	525 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	RPS27B	P38711	82 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	SAM50	P53969	484 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	IRC15	Q02733	499 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	MSS11	Q03825	758 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	COQ11	Q05892	277 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	VPS74	Q06385	345 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	ASA1	Q06822	443 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	YLL007C	Q07799	665 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	TPO4	Q12256	659 aa		5.72	□□□□□ -1.49
TIF1	YKR059W	CDC23	P16522	626 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	LSB5	P25369	354 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	SPS22	P25380	463 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	RPS2	P25443	254 aa	Known RBP	5.71	□□□□□ -1.5
TIF1	YKR059W	VMA5	P31412	392 aa	Known RBP	5.71	□□□□□ -1.5
TIF1	YKR059W	ECT1	P33412	323 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	FRE2	P36033	711 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	EFM1	P38732	585 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	SEC9	P40357	651 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	APQ12	P40532	138 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	SNO3	P43544	222 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	PHB2	P50085	310 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	NHP10	Q03435	203 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	SMP3	Q04174	516 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	GPN3	Q06543	272 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	BTS1	Q12051	335 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	PAA1	Q12447	191 aa	Known RBP	5.71	□□□□□ -1.5
TIF1	YKR059W	FMP16	Q12497	93 aa		5.71	□□□□□ -1.5
TIF1	YKR059W	YCL042W	P25572	119 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	GCG1	P32656	232 aa	Known RBP	5.7	□□□□□ -1.5
TIF1	YKR059W	STE24	P47154	453 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	SSN8	P47821	323 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	YDL186W	P48568	277 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	KEL2	P50090	882 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	PMT5	P52867	743 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	CLD1	P53264	445 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	YGR168C	P53293	376 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	IDP3	P53982	420 aa	Known RBP	5.7	□□□□□ -1.5
TIF1	YKR059W	MRPL51	Q06090	140 aa	Predicted RBP	5.7	□□□□□ -1.5
TIF1	YKR059W	SNT309	Q06091	175 aa	Predicted RBP	5.7	□□□□□ -1.5
TIF1	YKR059W	BOP2	Q06150	570 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	SLF1	Q12034	447 aa	Known RBP	5.7	□□□□□ -1.5
TIF1	YKR059W	YOR032W-A	Q8TGS1	66 aa		5.7	□□□□□ -1.5
TIF1	YKR059W	RAD1	P06777	1100 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	PHO2	P07269	559 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	RNA1	P11745	407 aa	Known RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	CHA1	P25379	360 aa	Known RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	YCR100C	P25606	316 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	TAH1	P25638	111 aa	Predicted RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	CSM1	P25651	190 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	DPH5	P32469	300 aa	Predicted RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	ERG1	P32476	496 aa	Known RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	MET30	P39014	640 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	ICE2	P40499	491 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	PHB1	P40961	287 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms