RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W YNL040WP53960 456 aaPredicted RBP3.66□□□□□ -1.82
YJR028WYJR028W MRX11Q03079 207 aa3.66□□□□□ -1.82
YJR028WYJR028W YMR209CQ03648 457 aa3.66□□□□□ -1.82
YJR028WYJR028W SCW10Q04951 389 aa3.66□□□□□ -1.82
YJR028WYJR028W MMT2Q08970 484 aa3.66□□□□□ -1.82
YJR028WYJR028W POM33Q12164 279 aa3.66□□□□□ -1.82
YJR028WYJR028W YPL245WQ12179 454 aaKnown RBP3.66□□□□□ -1.82
YJR028WYJR028W YPR064WQ12492 139 aa3.66□□□□□ -1.82
YJR028WYJR028W BGL2P15703 313 aaKnown RBP3.65□□□□□ -1.83
YJR028WYJR028W MRPL20P22354 195 aaPredicted RBP3.65□□□□□ -1.83
YJR028WYJR028W CWP1P28319 239 aa3.65□□□□□ -1.83
YJR028WYJR028W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
YJR028WYJR028W GPI18P38211 433 aa3.65□□□□□ -1.83
YJR028WYJR028W EFM1P38732 585 aa3.65□□□□□ -1.83
YJR028WYJR028W NRM1P53718 249 aa3.65□□□□□ -1.83
YJR028WYJR028W INP2Q03824 705 aa3.65□□□□□ -1.83
YJR028WYJR028W GMC1Q04399 608 aa3.65□□□□□ -1.83
YJR028WYJR028W PAL1Q05518 499 aaKnown RBP3.65□□□□□ -1.83
YJR028WYJR028W BOP2Q06150 570 aa3.65□□□□□ -1.83
YJR028WYJR028W PEX30Q06169 523 aa3.65□□□□□ -1.83
YJR028WYJR028W TMC1Q08422 150 aaPredicted RBP3.65□□□□□ -1.83
YJR028WYJR028W ILV1P00927 576 aaKnown RBP3.64□□□□□ -1.83
YJR028WYJR028W MET16P18408 261 aaPredicted RBP3.64□□□□□ -1.83
YJR028WYJR028W RRT12P25381 491 aa3.64□□□□□ -1.83
YJR028WYJR028W SPT4P32914 102 aaPredicted RBP3.64□□□□□ -1.83
YJR028WYJR028W SMP1P38128 452 aa3.64□□□□□ -1.83
YJR028WYJR028W TDA11P38854 504 aa3.64□□□□□ -1.83
YJR028WYJR028W RRG9P40156 214 aa3.64□□□□□ -1.83
YJR028WYJR028W TPN1P53099 579 aa3.64□□□□□ -1.83
YJR028WYJR028W CPD1P53314 239 aa3.64□□□□□ -1.83
YJR028WYJR028W SRL4Q03085 281 aa3.64□□□□□ -1.83
YJR028WYJR028W SRO7Q12038 1033 aa3.64□□□□□ -1.83
YJR028WYJR028W YOR114WQ12219 294 aa3.64□□□□□ -1.83
YJR028WYJR028W RRP42Q12277 265 aaPredicted RBP3.64□□□□□ -1.83
YJR028WYJR028W LAG2Q92325 660 aa3.64□□□□□ -1.83
YJR028WYJR028W RPP0P05317 312 aaKnown RBP3.63□□□□□ -1.83
YJR028WYJR028W IFM1P25038 676 aa3.63□□□□□ -1.83
YJR028WYJR028W ARO4P32449 370 aaKnown RBP3.63□□□□□ -1.83
YJR028WYJR028W AEP1P32493 518 aa3.63□□□□□ -1.83
YJR028WYJR028W YHR045WP38775 560 aa3.63□□□□□ -1.83
YJR028WYJR028W GGC1P38988 300 aa3.63□□□□□ -1.83
YJR028WYJR028W YIA6P40556 373 aa3.63□□□□□ -1.83
YJR028WYJR028W IBA57P47158 497 aa3.63□□□□□ -1.83
YJR028WYJR028W YPS5P53057 165 aa3.63□□□□□ -1.83
YJR028WYJR028W KTR6P54070 446 aa3.63□□□□□ -1.83
YJR028WYJR028W MRPS16Q02608 121 aa3.63□□□□□ -1.83
YJR028WYJR028W ARV1Q06541 321 aa3.63□□□□□ -1.83
YJR028WYJR028W YOR292CQ08743 309 aa3.63□□□□□ -1.83
YJR028WYJR028W MED4Q12343 284 aa3.63□□□□□ -1.83
YJR028WYJR028W ATG31Q12421 196 aa3.63□□□□□ -1.83
YJR028WYJR028W YOL085CQ99345 113 aa3.63□□□□□ -1.83
YJR028WYJR028W HSP26P15992 214 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
YJR028WYJR028W POF1P25576 258 aa3.62□□□□□ -1.83
YJR028WYJR028W IES6P32617 166 aa3.62□□□□□ -1.83
YJR028WYJR028W YOX1P34161 385 aa3.62□□□□□ -1.83
YJR028WYJR028W HSM3P38348 480 aa3.62□□□□□ -1.83
YJR028WYJR028W TIM21P53220 239 aa3.62□□□□□ -1.83
YJR028WYJR028W TRM44Q02648 567 aaKnown RBP3.62□□□□□ -1.83
YJR028WYJR028W RPL21AQ02753 160 aaKnown RBP3.62□□□□□ -1.83
YJR028WYJR028W VHS1Q03785 461 aa3.62□□□□□ -1.83
YJR028WYJR028W API2Q04413 109 aa3.62□□□□□ -1.83
YJR028WYJR028W DPP1Q05521 289 aa3.62□□□□□ -1.83
YJR028WYJR028W LOA1Q06508 300 aa3.62□□□□□ -1.83
YJR028WYJR028W RLP24Q07915 199 aaKnown RBP3.62□□□□□ -1.83
YJR028WYJR028W BSC6Q08280 497 aa3.62□□□□□ -1.83
YJR028WYJR028W BTS1Q12051 335 aa3.62□□□□□ -1.83
YJR028WYJR028W PET494P07390 489 aaPredicted RBP3.61□□□□□ -1.83
YJR028WYJR028W CSE1P33307 960 aa3.61□□□□□ -1.83
YJR028WYJR028W RFT1P38206 574 aaPredicted RBP3.61□□□□□ -1.83
YJR028WYJR028W MBA1P38300 278 aa3.61□□□□□ -1.83
YJR028WYJR028W SDS24P38314 527 aa3.61□□□□□ -1.83
YJR028WYJR028W BIG1P38813 335 aa3.61□□□□□ -1.83
YJR028WYJR028W LIA1P47120 325 aaKnown RBP3.61□□□□□ -1.83
YJR028WYJR028W YGR018CP53211 109 aa3.61□□□□□ -1.83
YJR028WYJR028W MNT4P53745 580 aa3.61□□□□□ -1.83
YJR028WYJR028W ALG11P53954 548 aaKnown RBP3.61□□□□□ -1.83
YJR028WYJR028W OST6Q03723 332 aa3.61□□□□□ -1.83
YJR028WYJR028W SEC13Q04491 297 aaKnown RBP3.61□□□□□ -1.83
YJR028WYJR028W SDO1Q07953 250 aaKnown RBP3.61□□□□□ -1.83
YJR028WYJR028W RAX2Q12465 1220 aa3.61□□□□□ -1.83
YJR028WYJR028W FOL3Q12676 427 aaPredicted RBP3.61□□□□□ -1.83
YJR028WYJR028W DAL81P21657 970 aa3.6□□□□□ -1.83
YJR028WYJR028W DAL82P21705 255 aa3.6□□□□□ -1.83
YJR028WYJR028W LDB16P25587 256 aa3.6□□□□□ -1.83
YJR028WYJR028W SUA5P32579 426 aa3.6□□□□□ -1.83
YJR028WYJR028W PRS4P38063 326 aaPredicted RBP3.6□□□□□ -1.83
YJR028WYJR028W DDI1P40087 428 aa3.6□□□□□ -1.83
YJR028WYJR028W FMC1P40491 155 aa3.6□□□□□ -1.83
YJR028WYJR028W BNA6P43619 295 aa3.6□□□□□ -1.83
YJR028WYJR028W YML018CQ03730 393 aa3.6□□□□□ -1.83
YJR028WYJR028W TAF9Q05027 157 aa3.6□□□□□ -1.83
YJR028WYJR028W SFH1Q06168 426 aa3.6□□□□□ -1.83
YJR028WYJR028W YOR029WQ12243 111 aa3.6□□□□□ -1.83
YJR028WYJR028W ADH1P00330 348 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W TPI1P00942 248 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W RPS3P05750 240 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W RAD3P06839 778 aa3.59□□□□□ -1.83
YJR028WYJR028W CBP6P07253 162 aaPredicted RBP3.59□□□□□ -1.83
YJR028WYJR028W VPS1P21576 704 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W PCL1P24867 279 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms