RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC97	YHR172W	ASI3	P53983	676 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	TMA20	P89886	181 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	TRS23	Q03784	219 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	HRD3	Q05787	833 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	ECI1	Q05871	280 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	SNT2	P53127	1403 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	TPI1	P00942	248 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	QRI5	P32344	111 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	CAT2	P32796	670 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	YBR056W	P38081	501 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	YBR053C	P38235	358 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	FMP32	P43557	207 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	HMS2	P47175	358 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	YGR151C	P53287	111 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	MSO1	P53604	210 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	SMM1	P53720	384 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	YMD8	Q03697	442 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	YMR315W	Q04869	349 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	YLR036C	Q07986	203 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	SNU23	Q12368	194 aa	Predicted RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	YLR361C-A	Q3E795	98 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	SUC2	P00724	532 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	MTF1	P14908	341 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	PMT2	P31382	759 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	JEN1	P36035	616 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	RRP3	P38712	501 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	KEG1	P43614	200 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	MST27	P53176	234 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	PEX31	P53203	462 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	MTM1	P53320	366 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	MAL13	P53338	473 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	ERG5	P54781	538 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	HCR1	Q05775	265 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	GRX8	Q05926	109 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	YPL225W	Q08971	146 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	USB1	Q12208	290 aa	Known RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	SME1	Q12330	94 aa	Predicted RBP	4.82	□□□□□ -1.64
SPC97	YHR172W	RDI1	Q12434	202 aa		4.82	□□□□□ -1.64
SPC97	YHR172W	RPL4A	P10664	362 aa	Known RBP	4.81	□□□□□ -1.64
SPC97	YHR172W	CUP2	P15315	225 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	MGT1	P26188	188 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	ANR2	P36090	516 aa	Predicted RBP	4.81	□□□□□ -1.64
SPC97	YHR172W	WSC4	P38739	605 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	YCH1	P42937	148 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	RPL4B	P49626	362 aa	Known RBP	4.81	□□□□□ -1.64
SPC97	YHR172W	CPR8	P53728	308 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	YLR152C	P54072	576 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	YML096W	Q04489	525 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	DAS2	Q12084	232 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	YLR049C	Q12110	428 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	USV1	Q12132	391 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	KIN28	P06242	306 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	DBF2	P22204	572 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	KAR4	P25583	335 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	ROT2	P38138	954 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	FAU1	P40099	211 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	MRPL49	P40858	161 aa	Predicted RBP	4.81	□□□□□ -1.64
SPC97	YHR172W	MUP1	P50276	574 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	NMA2	P53204	395 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	DYN3	Q04949	312 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	MCH4	Q08268	501 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	YOR283W	Q12040	230 aa	Known RBP	4.81	□□□□□ -1.64
SPC97	YHR172W	TPO4	Q12256	659 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	YOP1	Q12402	180 aa		4.81	□□□□□ -1.64
SPC97	YHR172W	BAR1	P12630	587 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	HEM15	P16622	393 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	SLY1	P22213	666 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	SEC22	P22214	214 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	SPS18	P32572	300 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	AIM34	Q03673	198 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	SNX41	Q04053	625 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	SSK1	Q07084	712 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	MRX9	Q07349	420 aa	Known RBP	4.8	□□□□□ -1.64
SPC97	YHR172W	AKR2	Q12013	749 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	MEX67	Q99257	599 aa	Known RBP	4.8	□□□□□ -1.64
SPC97	YHR172W	SIR4	P11978	1358 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	SPT3	P06844	337 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	BCY1	P07278	416 aa	Known RBP	4.8	□□□□□ -1.64
SPC97	YHR172W	NUP1	P20676	1076 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	YER076C	P40049	302 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	AIM23	P47015	356 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	PCP1	P53259	346 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	TIM44	Q01852	431 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	DET1	Q99288	334 aa	Known RBP	4.8	□□□□□ -1.64
SPC97	YHR172W	YOR1	P53049	1477 aa		4.8	□□□□□ -1.64
SPC97	YHR172W	CPR4	P25334	318 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	KAR9	P32526	644 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	LST4	P34239	828 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	CSG2	P35206	410 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	MED8	P38304	223 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	VPS52	P39904	641 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	OST3	P48439	350 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	SWC4	P53201	476 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	INM2	Q05533	292 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	SFH1	Q06168	426 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	YDL009C	Q12210	107 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	EFG1	Q3E705	233 aa	Known RBP	4.79	□□□□□ -1.64
SPC97	YHR172W	EXO70	P19658	623 aa		4.79	□□□□□ -1.64
SPC97	YHR172W	RPL16B	P26785	198 aa	Known RBP	4.79	□□□□□ -1.64
SPC97	YHR172W	SEC1	P30619	724 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms