RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C REP1P03871 373 aa3.66□□□□□ -1.82
SPO16YHR153C RAD23P32628 398 aaKnown RBP3.66□□□□□ -1.82
SPO16YHR153C TIP20P33891 701 aa3.66□□□□□ -1.82
SPO16YHR153C FHL1P39521 936 aa3.66□□□□□ -1.82
SPO16YHR153C ARP5P53946 755 aa3.66□□□□□ -1.82
SPO16YHR153C UBX2Q04228 584 aa3.66□□□□□ -1.82
SPO16YHR153C MRX9Q07349 420 aaKnown RBP3.66□□□□□ -1.82
SPO16YHR153C YLR012CQ07927 99 aa3.66□□□□□ -1.82
SPO16YHR153C RDL2Q08742 149 aaKnown RBP3.66□□□□□ -1.82
SPO16YHR153C PUT4P15380 627 aa3.65□□□□□ -1.83
SPO16YHR153C SAR1P20606 190 aaKnown RBP3.65□□□□□ -1.83
SPO16YHR153C SMF2P38778 549 aa3.65□□□□□ -1.83
SPO16YHR153C MNN9P39107 395 aaKnown RBP3.65□□□□□ -1.83
SPO16YHR153C HIT1P46973 164 aa3.65□□□□□ -1.83
SPO16YHR153C VOA1P53262 265 aa3.65□□□□□ -1.83
SPO16YHR153C IRC4Q03036 179 aa3.65□□□□□ -1.83
SPO16YHR153C API2Q04413 109 aa3.65□□□□□ -1.83
SPO16YHR153C PIN3Q06449 215 aa3.65□□□□□ -1.83
SPO16YHR153C TAO3P40468 2376 aa3.65□□□□□ -1.83
SPO16YHR153C MHP1P43638 1398 aa3.64□□□□□ -1.83
SPO16YHR153C FKS3Q04952 1785 aa3.64□□□□□ -1.83
SPO16YHR153C ZIP1P31111 875 aa3.64□□□□□ -1.83
SPO16YHR153C BUD2P33314 1104 aa3.64□□□□□ -1.83
SPO16YHR153C CBF5P33322 483 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SPO16YHR153C SMP1P38128 452 aa3.64□□□□□ -1.83
SPO16YHR153C YHR035WP38769 630 aa3.64□□□□□ -1.83
SPO16YHR153C RRT13P40042 185 aa3.64□□□□□ -1.83
SPO16YHR153C LOC1P43586 204 aaPredicted RBP3.64□□□□□ -1.83
SPO16YHR153C PMT4P46971 762 aa3.64□□□□□ -1.83
SPO16YHR153C YPR1Q12458 312 aa3.64□□□□□ -1.83
SPO16YHR153C YKL187CP34231 750 aa3.63□□□□□ -1.83
SPO16YHR153C YER184CP39961 794 aa3.63□□□□□ -1.83
SPO16YHR153C CDC40P40968 455 aaPredicted RBP3.63□□□□□ -1.83
SPO16YHR153C COQ5P49017 307 aa3.63□□□□□ -1.83
SPO16YHR153C YGR067CP53243 804 aa3.63□□□□□ -1.83
SPO16YHR153C OKP1P53298 406 aa3.63□□□□□ -1.83
SPO16YHR153C RAX2Q12465 1220 aa3.63□□□□□ -1.83
SPO16YHR153C NUP192P47054 1683 aa3.62□□□□□ -1.83
SPO16YHR153C CKA2P19454 339 aa3.62□□□□□ -1.83
SPO16YHR153C RPL5P26321 297 aaKnown RBP3.62□□□□□ -1.83
SPO16YHR153C CTM1P38818 585 aa3.62□□□□□ -1.83
SPO16YHR153C RIB4P50861 169 aaPredicted RBP3.62□□□□□ -1.83
SPO16YHR153C APC4Q04601 652 aa3.62□□□□□ -1.83
SPO16YHR153C RRG8Q06109 277 aa3.62□□□□□ -1.83
SPO16YHR153C SAM4Q08985 325 aaKnown RBP3.62□□□□□ -1.83
SPO16YHR153C YPL245WQ12179 454 aaKnown RBP3.62□□□□□ -1.83
SPO16YHR153C PAA1Q12447 191 aaKnown RBP3.62□□□□□ -1.83
SPO16YHR153C YOL085CQ99345 113 aa3.62□□□□□ -1.83
SPO16YHR153C SNF2P22082 1703 aa3.61□□□□□ -1.83
SPO16YHR153C SAL1D6W196 494 aa3.61□□□□□ -1.83
SPO16YHR153C DTR1P38125 572 aa3.61□□□□□ -1.83
SPO16YHR153C TAE1P38340 232 aa3.61□□□□□ -1.83
SPO16YHR153C COX16P47081 118 aa3.61□□□□□ -1.83
SPO16YHR153C DBP6P53734 629 aaKnown RBP3.61□□□□□ -1.83
SPO16YHR153C YPL080CQ02826 108 aa3.61□□□□□ -1.83
SPO16YHR153C ABZ2Q03266 374 aa3.61□□□□□ -1.83
SPO16YHR153C YDR018CQ12185 396 aa3.61□□□□□ -1.83
SPO16YHR153C DCP1Q12517 231 aaPredicted RBP3.61□□□□□ -1.83
SPO16YHR153C YIL002W-AQ3E7Z5 69 aa3.61□□□□□ -1.83
SPO16YHR153C CAR2P07991 424 aaKnown RBP3.6□□□□□ -1.83
SPO16YHR153C ZRT1P32804 376 aa3.6□□□□□ -1.83
SPO16YHR153C YKL162CP36052 402 aa3.6□□□□□ -1.83
SPO16YHR153C RCK1P38622 512 aa3.6□□□□□ -1.83
SPO16YHR153C UFE1P41834 346 aa3.6□□□□□ -1.83
SPO16YHR153C YFL040WP43562 540 aa3.6□□□□□ -1.83
SPO16YHR153C MIC19P43594 170 aa3.6□□□□□ -1.83
SPO16YHR153C SDS23P53172 527 aa3.6□□□□□ -1.83
SPO16YHR153C CUR1Q06469 252 aa3.6□□□□□ -1.83
SPO16YHR153C VAC14Q06708 880 aa3.6□□□□□ -1.83
SPO16YHR153C YOL029CQ08187 201 aa3.6□□□□□ -1.83
SPO16YHR153C TIR4Q12218 487 aaPredicted RBP3.6□□□□□ -1.83
SPO16YHR153C YAL067W-AQ8TGK6 75 aa3.6□□□□□ -1.83
SPO16YHR153C TY4B-HP0C2J7 1802 aa3.6□□□□□ -1.83
SPO16YHR153C TY4B-JP47024 1803 aa3.6□□□□□ -1.83
SPO16YHR153C ERD1P16151 362 aa3.59□□□□□ -1.83
SPO16YHR153C DAL80P26343 269 aa3.59□□□□□ -1.83
SPO16YHR153C FET3P38993 636 aa3.59□□□□□ -1.83
SPO16YHR153C TPC1P53257 314 aa3.59□□□□□ -1.83
SPO16YHR153C SNX41Q04053 625 aa3.59□□□□□ -1.83
SPO16YHR153C UTP15Q04305 513 aaKnown RBP3.59□□□□□ -1.83
SPO16YHR153C IZH4Q99393 312 aa3.59□□□□□ -1.83
SPO16YHR153C IFM1P25038 676 aa3.58□□□□□ -1.84
SPO16YHR153C EBP2P36049 427 aaKnown RBP3.58□□□□□ -1.84
SPO16YHR153C MRPL40P36534 297 aa3.58□□□□□ -1.84
SPO16YHR153C RFT1P38206 574 aaPredicted RBP3.58□□□□□ -1.84
SPO16YHR153C IES4Q08561 116 aa3.58□□□□□ -1.84
SPO16YHR153C SIA1Q12212 622 aa3.58□□□□□ -1.84
SPO16YHR153C UTP23Q12339 254 aaKnown RBP3.58□□□□□ -1.84
SPO16YHR153C RPC25P35718 212 aa3.57□□□□□ -1.84
SPO16YHR153C YMR262WP38430 313 aa3.57□□□□□ -1.84
SPO16YHR153C SOP4P39543 234 aaPredicted RBP3.57□□□□□ -1.84
SPO16YHR153C YIL054WP40524 105 aa3.57□□□□□ -1.84
SPO16YHR153C SWC4P53201 476 aa3.57□□□□□ -1.84
SPO16YHR153C YGR266WP53326 701 aa3.57□□□□□ -1.84
SPO16YHR153C NUM1Q00402 2748 aa3.57□□□□□ -1.84
SPO16YHR153C SPO19Q03029 223 aa3.57□□□□□ -1.84
SPO16YHR153C GMC1Q04399 608 aa3.57□□□□□ -1.84
SPO16YHR153C MRX8Q05473 314 aa3.57□□□□□ -1.84
SPO16YHR153C AUS1Q08409 1394 aa3.57□□□□□ -1.84
SPO16YHR153C VIK1Q12045 647 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 92 ms