RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W PLM2Q04383 521 aa4.58□□□□□ -1.68
MSH1YHR120W SSK1Q07084 712 aa4.58□□□□□ -1.68
MSH1YHR120W YOR283WQ12040 230 aaKnown RBP4.58□□□□□ -1.68
MSH1YHR120W MTR10Q99189 972 aa4.58□□□□□ -1.68
MSH1YHR120W YOS9Q99220 542 aa4.58□□□□□ -1.68
MSH1YHR120W TAD3Q9URQ3 322 aa4.58□□□□□ -1.68
MSH1YHR120W FLP1P03870 423 aa4.58□□□□□ -1.68
MSH1YHR120W MOD5P07884 428 aa4.58□□□□□ -1.68
MSH1YHR120W CBS1P14066 229 aa4.58□□□□□ -1.68
MSH1YHR120W JEN1P36035 616 aa4.58□□□□□ -1.68
MSH1YHR120W YBR137WP38276 179 aa4.58□□□□□ -1.68
MSH1YHR120W BPL1P48445 690 aaPredicted RBP4.58□□□□□ -1.68
MSH1YHR120W UBC12P52491 188 aa4.58□□□□□ -1.68
MSH1YHR120W HXT11P54862 567 aa4.58□□□□□ -1.68
MSH1YHR120W YPL068CQ02749 293 aa4.58□□□□□ -1.68
MSH1YHR120W NAT4Q04751 285 aa4.58□□□□□ -1.68
MSH1YHR120W IPK1Q06667 281 aa4.58□□□□□ -1.68
MSH1YHR120W YDL218WQ07629 317 aa4.58□□□□□ -1.68
MSH1YHR120W DCI1Q08558 271 aa4.58□□□□□ -1.68
MSH1YHR120W FRE6Q12473 712 aa4.58□□□□□ -1.68
MSH1YHR120W PCL9Q12477 304 aa4.58□□□□□ -1.68
MSH1YHR120W DAT1P13483 248 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W PBN1P25580 416 aa4.57□□□□□ -1.68
MSH1YHR120W RPS26AP39938 119 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W RPS26BP39939 119 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W YEL057CP39983 233 aa4.57□□□□□ -1.68
MSH1YHR120W PKP1P40530 394 aa4.57□□□□□ -1.68
MSH1YHR120W BAT2P47176 376 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W PAU12P53343 120 aa4.57□□□□□ -1.68
MSH1YHR120W DML1Q03652 475 aa4.57□□□□□ -1.68
MSH1YHR120W INP1Q03694 420 aa4.57□□□□□ -1.68
MSH1YHR120W CGI121Q03705 181 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W SEC13Q04491 297 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W MLC2Q06580 163 aa4.57□□□□□ -1.68
MSH1YHR120W YOR289WQ12012 251 aaPredicted RBP4.57□□□□□ -1.68
MSH1YHR120W YRM1Q12340 786 aa4.57□□□□□ -1.68
MSH1YHR120W TY1A-NL1Q12391 440 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W RPS21BQ3E754 87 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W PHO80P20052 293 aa4.57□□□□□ -1.68
MSH1YHR120W ANR2P36090 516 aaPredicted RBP4.57□□□□□ -1.68
MSH1YHR120W APL3P38065 1025 aa4.57□□□□□ -1.68
MSH1YHR120W GRE3P38715 327 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
MSH1YHR120W HRB1P38922 454 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
MSH1YHR120W MSS4P38994 779 aa4.57□□□□□ -1.68
MSH1YHR120W ECO1P43605 281 aa4.57□□□□□ -1.68
MSH1YHR120W PBP1P53297 722 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W NCE101Q02820 53 aa4.57□□□□□ -1.68
MSH1YHR120W PAL1Q05518 499 aaKnown RBP4.57□□□□□ -1.68
MSH1YHR120W ATP16Q12165 160 aa4.57□□□□□ -1.68
MSH1YHR120W RPA135P22138 1203 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W HSP150P32478 413 aa4.56□□□□□ -1.68
MSH1YHR120W PUB1P32588 453 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
MSH1YHR120W ECT1P33412 323 aa4.56□□□□□ -1.68
MSH1YHR120W TEF4P36008 412 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W RRF1P38771 230 aa4.56□□□□□ -1.68
MSH1YHR120W MTL1P53214 551 aa4.56□□□□□ -1.68
MSH1YHR120W FRE3Q08905 711 aa4.56□□□□□ -1.68
MSH1YHR120W APC2Q12440 853 aa4.56□□□□□ -1.68
MSH1YHR120W LSO1Q3E827 93 aa4.56□□□□□ -1.68
MSH1YHR120W GCN4P03069 281 aa4.56□□□□□ -1.68
MSH1YHR120W ARF1P11076 181 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W EXG1P23776 448 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W CAM1P29547 415 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W MSS1P32559 526 aaPredicted RBP4.56□□□□□ -1.68
MSH1YHR120W ECM15P35195 104 aa4.56□□□□□ -1.68
MSH1YHR120W TMA19P35691 167 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W HPA3P39979 161 aa4.56□□□□□ -1.68
MSH1YHR120W MET28P40573 187 aa4.56□□□□□ -1.68
MSH1YHR120W SMK1P41808 388 aa4.56□□□□□ -1.68
MSH1YHR120W LSM1P47017 172 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W ECM27P47144 725 aa4.56□□□□□ -1.68
MSH1YHR120W YGL101WP53144 215 aa4.56□□□□□ -1.68
MSH1YHR120W DBP6P53734 629 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W DID2P69771 204 aa4.56□□□□□ -1.68
MSH1YHR120W NGL2Q03264 515 aaKnown RBP4.56□□□□□ -1.68
MSH1YHR120W ARV1Q06541 321 aa4.56□□□□□ -1.68
MSH1YHR120W YHR213W-AQ8TGT4 77 aa4.56□□□□□ -1.68
MSH1YHR120W COX9P07255 59 aa4.55□□□□□ -1.68
MSH1YHR120W PEP4P07267 405 aaKnown RBP4.55□□□□□ -1.68
MSH1YHR120W RPL3P14126 387 aaKnown RBP4.55□□□□□ -1.68
MSH1YHR120W ERD2P18414 219 aa4.55□□□□□ -1.68
MSH1YHR120W RPB10P22139 70 aa4.55□□□□□ -1.68
MSH1YHR120W ERG8P24521 451 aa4.55□□□□□ -1.68
MSH1YHR120W CWH43P25618 953 aa4.55□□□□□ -1.68
MSH1YHR120W ERG9P29704 444 aa4.55□□□□□ -1.68
MSH1YHR120W DOA4P32571 926 aa4.55□□□□□ -1.68
MSH1YHR120W SHE2P36068 246 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
MSH1YHR120W GEP4P38812 185 aa4.55□□□□□ -1.68
MSH1YHR120W CHL4P38907 458 aa4.55□□□□□ -1.68
MSH1YHR120W POP6P53218 158 aa4.55□□□□□ -1.68
MSH1YHR120W MEP3P53390 489 aa4.55□□□□□ -1.68
MSH1YHR120W COS1P53822 381 aa4.55□□□□□ -1.68
MSH1YHR120W PDR16P53860 351 aaKnown RBP4.55□□□□□ -1.68
MSH1YHR120W MTQ1P53944 314 aa4.55□□□□□ -1.68
MSH1YHR120W CTL1Q03220 320 aaKnown RBP4.55□□□□□ -1.68
MSH1YHR120W COX20Q04935 205 aa4.55□□□□□ -1.68
MSH1YHR120W DCR2Q05924 578 aa4.55□□□□□ -1.68
MSH1YHR120W YLR224WQ05947 369 aa4.55□□□□□ -1.68
MSH1YHR120W ATG41Q12048 136 aa4.55□□□□□ -1.68
MSH1YHR120W YDL177CQ12257 170 aa4.55□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms