RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C YMR160WQ03823 816 aa2.91□□□□□ -1.94
RPN1YHR027C UPS3Q04006 179 aa2.91□□□□□ -1.94
RPN1YHR027C VBA1Q04301 562 aa2.91□□□□□ -1.94
RPN1YHR027C DUS4Q06063 367 aa2.91□□□□□ -1.94
RPN1YHR027C MRX9Q07349 420 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C TGS1Q12052 315 aa2.91□□□□□ -1.94
RPN1YHR027C SFG1Q12507 346 aa2.91□□□□□ -1.94
RPN1YHR027C WIP1Q2V2P8 89 aa2.91□□□□□ -1.94
RPN1YHR027C GSC2P40989 1895 aa2.91□□□□□ -1.94
RPN1YHR027C COX2P00410 251 aa2.91□□□□□ -1.94
RPN1YHR027C PUT1P09368 476 aa2.91□□□□□ -1.94
RPN1YHR027C TY1A-HP0C2I4 478 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C AMD1P15274 810 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C SCL1P21243 252 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C PPH21P23594 369 aa2.91□□□□□ -1.94
RPN1YHR027C VBA3P25594 458 aa2.91□□□□□ -1.94
RPN1YHR027C HOM6P31116 359 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C MET22P32179 357 aa2.91□□□□□ -1.94
RPN1YHR027C SFP1P32432 683 aa2.91□□□□□ -1.94
RPN1YHR027C YKL075CP36083 450 aa2.91□□□□□ -1.94
RPN1YHR027C YBR197CP38306 217 aa2.91□□□□□ -1.94
RPN1YHR027C YHR033WP38690 423 aa2.91□□□□□ -1.94
RPN1YHR027C BDH1P39714 382 aa2.91□□□□□ -1.94
RPN1YHR027C YIL161WP40449 235 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C FLX1P40464 311 aa2.91□□□□□ -1.94
RPN1YHR027C PAU15P40585 124 aa2.91□□□□□ -1.94
RPN1YHR027C MOB2P43563 287 aa2.91□□□□□ -1.94
RPN1YHR027C IRC7P43623 340 aa2.91□□□□□ -1.94
RPN1YHR027C OST3P48439 350 aa2.91□□□□□ -1.94
RPN1YHR027C AVT4P50944 713 aa2.91□□□□□ -1.94
RPN1YHR027C PRM8P53174 237 aa2.91□□□□□ -1.94
RPN1YHR027C SYF2P53277 215 aaPredicted RBP2.91□□□□□ -1.94
RPN1YHR027C YNR029CP53729 429 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C YLR225CQ05948 407 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C PIN3Q06449 215 aa2.91□□□□□ -1.94
RPN1YHR027C SWC7Q06707 132 aa2.91□□□□□ -1.94
RPN1YHR027C YLR036CQ07986 203 aa2.91□□□□□ -1.94
RPN1YHR027C UPC2Q12151 913 aa2.91□□□□□ -1.94
RPN1YHR027C FRE8Q12209 686 aa2.91□□□□□ -1.94
RPN1YHR027C MDY2Q12285 212 aa2.91□□□□□ -1.94
RPN1YHR027C SUL2Q12325 893 aa2.91□□□□□ -1.94
RPN1YHR027C PRM4Q12498 284 aa2.91□□□□□ -1.94
RPN1YHR027C FIG2P25653 1609 aa2.91□□□□□ -1.94
RPN1YHR027C YRF1-3P0CX14 1859 aa2.91□□□□□ -1.94
RPN1YHR027C YRF1-7P0CX15 1859 aa2.91□□□□□ -1.94
RPN1YHR027C YRF1-6P53819 1859 aa2.91□□□□□ -1.94
RPN1YHR027C YEL009C-AA0A023PZF2 135 aa2.91□□□□□ -1.94
RPN1YHR027C CDC4P07834 779 aa2.91□□□□□ -1.94
RPN1YHR027C YFL068WP0CX99 160 aa2.91□□□□□ -1.94
RPN1YHR027C YLL066W-AP0CY00 160 aa2.91□□□□□ -1.94
RPN1YHR027C YLL067W-AP0CY01 160 aa2.91□□□□□ -1.94
RPN1YHR027C UNG1P12887 359 aa2.91□□□□□ -1.94
RPN1YHR027C ERS1P17261 260 aa2.91□□□□□ -1.94
RPN1YHR027C SLM5P25345 492 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C PUT3P25502 979 aaPredicted RBP2.91□□□□□ -1.94
RPN1YHR027C MRP20P32387 263 aa2.91□□□□□ -1.94
RPN1YHR027C NTF2P33331 125 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C YOX1P34161 385 aa2.91□□□□□ -1.94
RPN1YHR027C QDR3P38227 689 aa2.91□□□□□ -1.94
RPN1YHR027C MTC4P38335 694 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C CRP1P38845 465 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C SMB1P40018 196 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C YER158CP40095 573 aa2.91□□□□□ -1.94
RPN1YHR027C LRO1P40345 661 aa2.91□□□□□ -1.94
RPN1YHR027C PRM2P40534 656 aa2.91□□□□□ -1.94
RPN1YHR027C QRI7P43122 407 aa2.91□□□□□ -1.94
RPN1YHR027C TRM9P49957 279 aa2.91□□□□□ -1.94
RPN1YHR027C PHB2P50085 310 aa2.91□□□□□ -1.94
RPN1YHR027C STR3P53101 465 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C YGL114WP53134 725 aa2.91□□□□□ -1.94
RPN1YHR027C BUD9P53226 547 aa2.91□□□□□ -1.94
RPN1YHR027C YGR053CP53234 283 aa2.91□□□□□ -1.94
RPN1YHR027C TUB4P53378 473 aa2.91□□□□□ -1.94
RPN1YHR027C VPS9P54787 451 aa2.91□□□□□ -1.94
RPN1YHR027C TRM44Q02648 567 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C YML018CQ03730 393 aa2.91□□□□□ -1.94
RPN1YHR027C SIA1Q12212 622 aa2.91□□□□□ -1.94
RPN1YHR027C ERP3Q12403 225 aa2.91□□□□□ -1.94
RPN1YHR027C SKS1Q12505 502 aa2.91□□□□□ -1.94
RPN1YHR027C HTS1P07263 546 aaKnown RBP2.9□□□□□ -1.94
RPN1YHR027C HAP3P13434 144 aa2.9□□□□□ -1.94
RPN1YHR027C SAM35P14693 329 aa2.9□□□□□ -1.94
RPN1YHR027C PRE8P23639 250 aa2.9□□□□□ -1.94
RPN1YHR027C EXG1P23776 448 aaKnown RBP2.9□□□□□ -1.94
RPN1YHR027C ELO2P25358 347 aa2.9□□□□□ -1.94
RPN1YHR027C AFG1P32317 509 aa2.9□□□□□ -1.94
RPN1YHR027C SUA5P32579 426 aa2.9□□□□□ -1.94
RPN1YHR027C YPT53P36019 220 aa2.9□□□□□ -1.94
RPN1YHR027C RPF1P38805 295 aaKnown RBP2.9□□□□□ -1.94
RPN1YHR027C ASP1P38986 381 aaPredicted RBP2.9□□□□□ -1.94
RPN1YHR027C FIR1P40020 876 aa2.9□□□□□ -1.94
RPN1YHR027C LSM5P40089 93 aaKnown RBP2.9□□□□□ -1.94
RPN1YHR027C MPM1P40364 252 aa2.9□□□□□ -1.94
RPN1YHR027C GPG1P53130 126 aa2.9□□□□□ -1.94
RPN1YHR027C GTR2P53290 341 aa2.9□□□□□ -1.94
RPN1YHR027C AAH1P53909 347 aa2.9□□□□□ -1.94
RPN1YHR027C EOS1P53938 366 aa2.9□□□□□ -1.94
RPN1YHR027C YVH1Q02256 364 aaKnown RBP2.9□□□□□ -1.94
RPN1YHR027C GMC1Q04399 608 aa2.9□□□□□ -1.94
RPN1YHR027C ERP1Q05359 219 aaKnown RBP2.9□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms