RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YER184CP39961 794 aa7.02□□□□□ -1.29
PUP3YER094C YJL218WP40892 196 aaKnown RBP7.02□□□□□ -1.29
PUP3YER094C SAY1P53324 424 aa7.02□□□□□ -1.29
PUP3YER094C PAU12P53343 120 aa7.02□□□□□ -1.29
PUP3YER094C SDC1Q03323 175 aa7.02□□□□□ -1.29
PUP3YER094C RCF1Q03713 159 aa7.02□□□□□ -1.29
PUP3YER094C RBS1Q05672 457 aaKnown RBP7.02□□□□□ -1.29
PUP3YER094C YPR109WQ06104 294 aa7.02□□□□□ -1.29
PUP3YER094C YPR147CQ06522 304 aaKnown RBP7.02□□□□□ -1.29
PUP3YER094C YDL176WQ12027 708 aa7.02□□□□□ -1.29
PUP3YER094C MED2Q12124 431 aa7.02□□□□□ -1.29
PUP3YER094C YPR1Q12458 312 aa7.02□□□□□ -1.29
PUP3YER094C DCP1Q12517 231 aaPredicted RBP7.02□□□□□ -1.29
PUP3YER094C YAL064W-BO13512 126 aa7.01□□□□□ -1.29
PUP3YER094C RPN13O13563 156 aa7.01□□□□□ -1.29
PUP3YER094C SIR2P06700 562 aa7.01□□□□□ -1.29
PUP3YER094C CTA1P15202 515 aa7.01□□□□□ -1.29
PUP3YER094C PDX1P16451 410 aa7.01□□□□□ -1.29
PUP3YER094C EXG1P23776 448 aaKnown RBP7.01□□□□□ -1.29
PUP3YER094C STE50P25344 346 aa7.01□□□□□ -1.29
PUP3YER094C AHC2P25649 128 aa7.01□□□□□ -1.29
PUP3YER094C SCS7Q03529 384 aa7.01□□□□□ -1.29
PUP3YER094C GPI17Q04080 534 aa7.01□□□□□ -1.29
PUP3YER094C MRPL51Q06090 140 aaPredicted RBP7.01□□□□□ -1.29
PUP3YER094C BRE4Q07660 1125 aa7.01□□□□□ -1.29
PUP3YER094C YOL024WQ08172 172 aa7.01□□□□□ -1.29
PUP3YER094C NGL1Q08213 363 aaKnown RBP7.01□□□□□ -1.29
PUP3YER094C YPL278CQ08990 100 aa7.01□□□□□ -1.29
PUP3YER094C SUS1Q6WNK7 96 aa7.01□□□□□ -1.29
PUP3YER094C CYT1P07143 309 aa7□□□□□ -1.29
PUP3YER094C PRE7P23724 241 aaKnown RBP7□□□□□ -1.29
PUP3YER094C BOS1P25385 244 aa7□□□□□ -1.29
PUP3YER094C PPA2P28239 310 aa7□□□□□ -1.29
PUP3YER094C PAU24P38155 120 aa7□□□□□ -1.29
PUP3YER094C AMN1P38285 549 aaPredicted RBP7□□□□□ -1.29
PUP3YER094C RTT105P40063 208 aa7□□□□□ -1.29
PUP3YER094C POP1P41812 875 aa7□□□□□ -1.29
PUP3YER094C GDS1P41913 522 aa7□□□□□ -1.29
PUP3YER094C ATG18P43601 500 aa7□□□□□ -1.29
PUP3YER094C CWC23P52868 283 aaPredicted RBP7□□□□□ -1.29
PUP3YER094C HOL1P53389 586 aa7□□□□□ -1.29
PUP3YER094C ATG4P53867 494 aa7□□□□□ -1.29
PUP3YER094C APM1Q00776 475 aaPredicted RBP7□□□□□ -1.29
PUP3YER094C GPN3Q06543 272 aa7□□□□□ -1.29
PUP3YER094C PEX27Q08580 376 aa7□□□□□ -1.29
PUP3YER094C HMS1Q12398 434 aa7□□□□□ -1.29
PUP3YER094C FRE6Q12473 712 aa7□□□□□ -1.29
PUP3YER094C YLR099W-AQ3E798 87 aa7□□□□□ -1.29
PUP3YER094C YBL113CQ7M4S9 792 aa7□□□□□ -1.29
PUP3YER094C SEC16P48415 2195 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C CDC31P06704 161 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C RPA135P22138 1203 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C KRR1P25586 316 aaPredicted RBP6.99□□□□□ -1.29
PUP3YER094C SRP102P36057 244 aaPredicted RBP6.99□□□□□ -1.29
PUP3YER094C YBR137WP38276 179 aa6.99□□□□□ -1.29
PUP3YER094C SEC24P40482 926 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C PAM16P42949 149 aa6.99□□□□□ -1.29
PUP3YER094C RAI1P53063 387 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C PBP1P53297 722 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C TDA1Q03533 586 aa6.99□□□□□ -1.29
PUP3YER094C BNA7Q04066 261 aa6.99□□□□□ -1.29
PUP3YER094C YMR252CQ04814 134 aa6.99□□□□□ -1.29
PUP3YER094C MRX8Q05473 314 aa6.99□□□□□ -1.29
PUP3YER094C NIP7Q08962 181 aaKnown RBP6.99□□□□□ -1.29
PUP3YER094C BAG7Q12128 409 aa6.99□□□□□ -1.29
PUP3YER094C SFG1Q12507 346 aa6.99□□□□□ -1.29
PUP3YER094C MSW1P04803 379 aa6.98□□□□□ -1.29
PUP3YER094C RPS13P05756 151 aaKnown RBP6.98□□□□□ -1.29
PUP3YER094C MRP1P10662 321 aaKnown RBP6.98□□□□□ -1.29
PUP3YER094C HMG1P12683 1054 aa6.98□□□□□ -1.29
PUP3YER094C UTR1P21373 530 aa6.98□□□□□ -1.29
PUP3YER094C RPC34P32910 317 aa6.98□□□□□ -1.29
PUP3YER094C VPS17P32913 551 aa6.98□□□□□ -1.29
PUP3YER094C MTH1P35198 433 aa6.98□□□□□ -1.29
PUP3YER094C COS9P36034 407 aa6.98□□□□□ -1.29
PUP3YER094C SHE2P36068 246 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PUP3YER094C FCY21P40039 528 aa6.98□□□□□ -1.29
PUP3YER094C RFC4P40339 323 aaKnown RBP6.98□□□□□ -1.29
PUP3YER094C PMT6P42934 759 aa6.98□□□□□ -1.29
PUP3YER094C PMT5P52867 743 aa6.98□□□□□ -1.29
PUP3YER094C BSC5P53755 489 aa6.98□□□□□ -1.29
PUP3YER094C VBA4Q04602 768 aaKnown RBP6.98□□□□□ -1.29
PUP3YER094C CTS2Q06350 511 aa6.98□□□□□ -1.29
PUP3YER094C SYC1Q08553 188 aaPredicted RBP6.98□□□□□ -1.29
PUP3YER094C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PUP3YER094C OPI3P05375 206 aa6.97□□□□□ -1.29
PUP3YER094C SPO7P18410 259 aa6.97□□□□□ -1.29
PUP3YER094C STE18P18852 110 aa6.97□□□□□ -1.29
PUP3YER094C MDH2P22133 377 aa6.97□□□□□ -1.29
PUP3YER094C RPB10P22139 70 aa6.97□□□□□ -1.29
PUP3YER094C NFS1P25374 497 aa6.97□□□□□ -1.29
PUP3YER094C MCM10P32354 571 aa6.97□□□□□ -1.29
PUP3YER094C DOA4P32571 926 aa6.97□□□□□ -1.29
PUP3YER094C PDR3P33200 976 aa6.97□□□□□ -1.29
PUP3YER094C ZRT3P34240 503 aa6.97□□□□□ -1.29
PUP3YER094C PHB1P40961 287 aa6.97□□□□□ -1.29
PUP3YER094C IMD3P50095 523 aaKnown RBP6.97□□□□□ -1.29
PUP3YER094C IMO32P53219 342 aa6.97□□□□□ -1.29
PUP3YER094C ASI3P53983 676 aa6.97□□□□□ -1.29
PUP3YER094C YDR102CQ03864 110 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms