RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	YLR352W	Q06479	807 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	MCM21	Q06675	368 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	YDL114W	Q07530	308 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	HRT1	Q08273	121 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	RBD2	Q12270	262 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	Q0144	Q9ZZW2	109 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	YAL064W-B	O13512	126 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	RAS1	P01119	309 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	STE12	P13574	688 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	PDX1	P16451	410 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	GAS1	P22146	559 aa	Known RBP	5.78	□□□□□ -1.48
VMA3	YEL027W	FPS1	P23900	669 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	NFS1	P25374	497 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	KRE6	P32486	720 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
VMA3	YEL027W	RCN1	P36054	211 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	CHK1	P38147	527 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	SHE1	P38200	338 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	PHO90	P39535	881 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	SFH5	P47008	294 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	EFM3	P47163	339 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	YGR126W	P53274	230 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	MRX10	Q05648	414 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	GAS2	Q06135	555 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	YOR238W	Q08634	303 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	GRE1	Q08969	168 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	THP3	Q12049	470 aa	Known RBP	5.78	□□□□□ -1.48
VMA3	YEL027W	SFG1	Q12507	346 aa		5.78	□□□□□ -1.48
VMA3	YEL027W	FLO9	P39712	1322 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	YGL041W-A	P0C5N3	154 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	GCN3	P14741	305 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	YCL002C	P25565	263 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	PTC6	P25646	442 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	ECT1	P33412	323 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	MAL32	P38158	584 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	FMP23	P38231	175 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	YIL169C	P40442	995 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	XBP1	P40489	647 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	POP1	P41812	875 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	NIT2	P47016	307 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	MAL12	P53341	584 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	ALG12	P53730	551 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	NUP116	Q02630	1113 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	NOG1	Q02892	647 aa	Known RBP	5.77	□□□□□ -1.49
VMA3	YEL027W	RRP17	Q04031	235 aa	Predicted RBP	5.77	□□□□□ -1.49
VMA3	YEL027W	GAL83	Q04739	417 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	YLR173W	Q06247	608 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	TAZ1	Q06510	381 aa		5.77	□□□□□ -1.49
VMA3	YEL027W	YPR147C	Q06522	304 aa	Known RBP	5.77	□□□□□ -1.49
VMA3	YEL027W	RKM1	Q08961	583 aa	Predicted RBP	5.77	□□□□□ -1.49
VMA3	YEL027W	CTA1	P15202	515 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	UTR1	P21373	530 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	FUN19	P28003	413 aa	Predicted RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	VMA22	P38784	181 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	NVJ1	P38881	321 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	RFC4	P40339	323 aa	Known RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	YIL165C	P40446	119 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	FMC1	P40491	155 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	PFS2	P42841	465 aa	Known RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	BRR6	P53062	197 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	YGR066C	P53242	292 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	APM1	Q00776	475 aa	Predicted RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	MAK3	Q03503	176 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	VBA4	Q04602	768 aa	Known RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	MRPL51	Q06090	140 aa	Predicted RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	IPK1	Q06667	281 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	NIP7	Q08962	181 aa	Known RBP	5.76	□□□□□ -1.49
VMA3	YEL027W	YLR125W	Q12138	136 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	SCM3	Q12334	223 aa		5.76	□□□□□ -1.49
VMA3	YEL027W	STE50	P25344	346 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	SBA1	P28707	216 aa	Known RBP	5.75	□□□□□ -1.49
VMA3	YEL027W	THI4	P32318	326 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	MTC2	P34246	357 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	DTR1	P38125	572 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	SDP1	P40479	209 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	NAS2	P40555	220 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	PRY1	P47032	299 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	YJL055W	P47044	245 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	VOA1	P53262	265 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	AIM6	Q07716	390 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	MIM1	Q08176	113 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	YDL176W	Q12027	708 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	RCN2	Q12044	265 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	YOL114C	Q12322	202 aa		5.75	□□□□□ -1.49
VMA3	YEL027W	CBP6	P07253	162 aa	Predicted RBP	5.74	□□□□□ -1.49
VMA3	YEL027W	NFT1	P0CE68	1218 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	MCM1	P11746	286 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	MDH2	P22133	377 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	MAK32	P23060	363 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	YCL042W	P25572	119 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	CAM1	P29547	415 aa	Known RBP	5.74	□□□□□ -1.49
VMA3	YEL027W	FUN26	P31381	517 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	MCM10	P32354	571 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
VMA3	YEL027W	COS9	P36034	407 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	SDS22	P36047	338 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	YPK3	P38070	525 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	PET100	P38958	111 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	PCL6	P40038	420 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	YAE1	P47118	141 aa	Predicted RBP	5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms