RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W FET3P38993 636 aa3.07□□□□□ -1.92
SIZ1YDR409W FMP52P40008 231 aa3.07□□□□□ -1.92
SIZ1YDR409W RPS12P48589 143 aaKnown RBP3.07□□□□□ -1.92
SIZ1YDR409W SPT20P50875 604 aa3.07□□□□□ -1.92
SIZ1YDR409W YGR117CP53270 476 aa3.07□□□□□ -1.92
SIZ1YDR409W TIM13P53299 105 aa3.07□□□□□ -1.92
SIZ1YDR409W TRM44Q02648 567 aaKnown RBP3.07□□□□□ -1.92
SIZ1YDR409W IRC15Q02733 499 aa3.07□□□□□ -1.92
SIZ1YDR409W SSY1Q03770 852 aa3.07□□□□□ -1.92
SIZ1YDR409W YMR087WQ04299 284 aa3.07□□□□□ -1.92
SIZ1YDR409W BUR2Q05949 395 aa3.07□□□□□ -1.92
SIZ1YDR409W TPO3Q06451 622 aa3.07□□□□□ -1.92
SIZ1YDR409W LAS17Q12446 633 aa3.07□□□□□ -1.92
SIZ1YDR409W YEL009C-AA0A023PZF2 135 aa3.06□□□□□ -1.92
SIZ1YDR409W RPP2BP02400 110 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W NHP6BP11633 99 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W FUS3P16892 353 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W PPH22P23595 377 aa3.06□□□□□ -1.92
SIZ1YDR409W YIH1P25637 258 aa3.06□□□□□ -1.92
SIZ1YDR409W GAC1P28006 793 aa3.06□□□□□ -1.92
SIZ1YDR409W GSH1P32477 678 aa3.06□□□□□ -1.92
SIZ1YDR409W NDC1P32500 655 aa3.06□□□□□ -1.92
SIZ1YDR409W CAT2P32796 670 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W PDR3P33200 976 aa3.06□□□□□ -1.92
SIZ1YDR409W SNU114P36048 1008 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W URA8P38627 578 aaPredicted RBP3.06□□□□□ -1.92
SIZ1YDR409W MEP2P41948 499 aa3.06□□□□□ -1.92
SIZ1YDR409W ATG18P43601 500 aa3.06□□□□□ -1.92
SIZ1YDR409W LYS5P50113 272 aa3.06□□□□□ -1.92
SIZ1YDR409W PYK2P52489 506 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W YGR066CP53242 292 aa3.06□□□□□ -1.92
SIZ1YDR409W RRN9P53437 365 aa3.06□□□□□ -1.92
SIZ1YDR409W FYV6P53913 173 aa3.06□□□□□ -1.92
SIZ1YDR409W OCA2P53949 197 aa3.06□□□□□ -1.92
SIZ1YDR409W TIM44Q01852 431 aa3.06□□□□□ -1.92
SIZ1YDR409W MSS11Q03825 758 aa3.06□□□□□ -1.92
SIZ1YDR409W HRD3Q05787 833 aa3.06□□□□□ -1.92
SIZ1YDR409W BSC1Q12140 328 aa3.06□□□□□ -1.92
SIZ1YDR409W YGL194C-AQ2V2P6 80 aa3.06□□□□□ -1.92
SIZ1YDR409W SLH1P53327 1967 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W REP2P03872 296 aa3.06□□□□□ -1.92
SIZ1YDR409W PET18P25362 215 aa3.06□□□□□ -1.92
SIZ1YDR409W IDH1P28834 360 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
SIZ1YDR409W SUA5P32579 426 aa3.06□□□□□ -1.92
SIZ1YDR409W EMP70P32802 667 aa3.06□□□□□ -1.92
SIZ1YDR409W ASH1P34233 588 aa3.06□□□□□ -1.92
SIZ1YDR409W THI80P35202 319 aa3.06□□□□□ -1.92
SIZ1YDR409W MIA40P36046 403 aa3.06□□□□□ -1.92
SIZ1YDR409W EFM1P38732 585 aa3.06□□□□□ -1.92
SIZ1YDR409W SKN7P38889 622 aa3.06□□□□□ -1.92
SIZ1YDR409W DHH1P39517 506 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W HPA3P39979 161 aa3.06□□□□□ -1.92
SIZ1YDR409W YIL108WP40483 696 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W GTT1P40582 234 aa3.06□□□□□ -1.92
SIZ1YDR409W YGR149WP48236 432 aa3.06□□□□□ -1.92
SIZ1YDR409W MSY1P48527 492 aa3.06□□□□□ -1.92
SIZ1YDR409W LYS20P48570 428 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W PMT5P52867 743 aa3.06□□□□□ -1.92
SIZ1YDR409W YGR126WP53274 230 aa3.06□□□□□ -1.92
SIZ1YDR409W TRM112P53738 135 aaPredicted RBP3.06□□□□□ -1.92
SIZ1YDR409W STP1Q00947 519 aa3.06□□□□□ -1.92
SIZ1YDR409W YMR279CQ03263 540 aa3.06□□□□□ -1.92
SIZ1YDR409W YMR130WQ04223 302 aa3.06□□□□□ -1.92
SIZ1YDR409W RRG8Q06109 277 aa3.06□□□□□ -1.92
SIZ1YDR409W FRE5Q08908 694 aa3.06□□□□□ -1.92
SIZ1YDR409W DDC1Q08949 612 aa3.06□□□□□ -1.92
SIZ1YDR409W DGK1Q12382 290 aa3.06□□□□□ -1.92
SIZ1YDR409W TRM13Q12383 476 aa3.06□□□□□ -1.92
SIZ1YDR409W PSF1Q12488 208 aa3.06□□□□□ -1.92
SIZ1YDR409W TDH2P00358 332 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W HIS1P00498 297 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W ILV5P06168 395 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W SIR2P06700 562 aa3.06□□□□□ -1.92
SIZ1YDR409W UTR1P21373 530 aa3.06□□□□□ -1.92
SIZ1YDR409W HCM1P25364 564 aa3.06□□□□□ -1.92
SIZ1YDR409W IMD2P38697 523 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W MDM31P38880 579 aa3.06□□□□□ -1.92
SIZ1YDR409W CDC1P40986 491 aa3.06□□□□□ -1.92
SIZ1YDR409W CHA4P43634 648 aa3.06□□□□□ -1.92
SIZ1YDR409W JAC1P53193 184 aa3.06□□□□□ -1.92
SIZ1YDR409W MTL1P53214 551 aa3.06□□□□□ -1.92
SIZ1YDR409W TEX1P53851 422 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
SIZ1YDR409W EKI1Q03764 534 aa3.06□□□□□ -1.92
SIZ1YDR409W YDR132CQ03900 495 aa3.06□□□□□ -1.92
SIZ1YDR409W RVB1Q03940 463 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W GIM5Q04493 163 aa3.06□□□□□ -1.92
SIZ1YDR409W POS5Q06892 414 aa3.06□□□□□ -1.92
SIZ1YDR409W LDB18Q07887 179 aa3.06□□□□□ -1.92
SIZ1YDR409W PLB3Q08108 686 aa3.06□□□□□ -1.92
SIZ1YDR409W SKI7Q08491 747 aaPredicted RBP3.06□□□□□ -1.92
SIZ1YDR409W YOR283WQ12040 230 aaKnown RBP3.06□□□□□ -1.92
SIZ1YDR409W SAL1D6W196 494 aa3.05□□□□□ -1.92
SIZ1YDR409W RIP1P08067 215 aa3.05□□□□□ -1.92
SIZ1YDR409W MET2P08465 486 aa3.05□□□□□ -1.92
SIZ1YDR409W PTP1P25044 335 aa3.05□□□□□ -1.92
SIZ1YDR409W HOM6P31116 359 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W ACB1P31787 87 aa3.05□□□□□ -1.92
SIZ1YDR409W SFC1P33303 322 aa3.05□□□□□ -1.92
SIZ1YDR409W GMH1P36125 273 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms