RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	VEL1	P53058	206 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	YNL033W	P53964	284 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	YNL019C	P53975	284 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	TMA20	P89886	181 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	RRN5	Q02983	363 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	TLG1	Q03322	224 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	YMR111C	Q04461	462 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	FAR10	Q06001	478 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	DBP9	Q06218	594 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	ATG10	Q07879	167 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	RRT8	Q08219	342 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	DCI1	Q08558	271 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	PSY3	Q12318	242 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	SET6	Q12529	373 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	YLR422W	Q06409	1932 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	COX3	P00420	269 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	MRS3	P10566	314 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	TAL1	P15019	335 aa	Known RBP	4.17	□□□□□ -1.74
NUP42	YDR192C	YCR100C	P25606	316 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	ASF2	P32448	525 aa	Predicted RBP	4.17	□□□□□ -1.74
NUP42	YDR192C	NUP2	P32499	720 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	MDL1	P33310	695 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	NUF2	P33895	451 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	PMU1	P36069	295 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	YHR218W	P38899	603 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	GDI1	P39958	451 aa	Known RBP	4.17	□□□□□ -1.74
NUP42	YDR192C	YEL073C	P39974	107 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	SAS2	P40963	338 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	FMP32	P43557	207 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	YIP1	P53039	248 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	EMC4	P53073	190 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	PCP1	P53259	346 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	FRE4	P53746	719 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	VAC7	P53950	1165 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	OAZ1	Q02803	292 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	MRP51	Q02950	344 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	MET31	Q03081	177 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	YMR010W	Q03687	405 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	TRM12	Q04235	462 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	YHC1	Q05900	231 aa	Known RBP	4.17	□□□□□ -1.74
NUP42	YDR192C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
NUP42	YDR192C	SAM4	Q08985	325 aa	Known RBP	4.17	□□□□□ -1.74
NUP42	YDR192C	PFK27	Q12471	397 aa	Predicted RBP	4.17	□□□□□ -1.74
NUP42	YDR192C	MHT1	Q12525	324 aa		4.17	□□□□□ -1.74
NUP42	YDR192C	RPL15A	P05748	204 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	GAL3	P13045	520 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	SCL1	P21243	252 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	PUT3	P25502	979 aa	Predicted RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	RPS5	P26783	225 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	SPO23	P33757	523 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	YCR041W	P37265	110 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	ASC1	P38011	319 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	RRN10	P38204	145 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	RCK1	P38622	512 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	TDA11	P38854	504 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	FAD1	P38913	306 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	HPM1	P40481	377 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	SER33	P40510	469 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	APQ12	P40532	138 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	MEP2	P41948	499 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	EMC2	P47133	292 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	COQ5	P49017	307 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	CAF40	P53829	373 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	YIF1	P53845	314 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	YPL107W	Q02873	248 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	RNY1	Q02933	434 aa	Known RBP	4.16	□□□□□ -1.74
NUP42	YDR192C	YPL113C	Q02961	396 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	RRN11	Q04712	507 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	MDM30	Q05930	598 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	PPT2	Q12036	173 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	LAG2	Q92325	660 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	FMP27	Q06179	2628 aa		4.16	□□□□□ -1.74
NUP42	YDR192C	RAD7	P06779	565 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	SNF4	P12904	322 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	UGA1	P17649	471 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	YSR3	P23501	404 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	CAT2	P32796	670 aa	Known RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	SFC1	P33303	322 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	YKL097C	P34245	136 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	SKG1	P36169	355 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	PDX3	P38075	228 aa	Known RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	MTC4	P38335	694 aa	Known RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	GGC1	P38988	300 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	YAL037W	P39728	267 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	VHS2	P40463	436 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	MSS2	P40990	351 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	ATP22	P50273	684 aa	Predicted RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	EGD1	Q02642	157 aa	Known RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	SKI8	Q02793	397 aa	Predicted RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	SWP1	Q02795	286 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	SRL4	Q03085	281 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	JLP1	Q12358	412 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	PAR32	Q12515	295 aa	Known RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	MEX67	Q99257	599 aa	Known RBP	4.15	□□□□□ -1.75
NUP42	YDR192C	RIB3	Q99258	208 aa		4.15	□□□□□ -1.75
NUP42	YDR192C	YPR096C	O13587	100 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	DST1	P07273	309 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	SLM5	P25345	492 aa	Known RBP	4.14	□□□□□ -1.75
NUP42	YDR192C	ADE1	P27616	306 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	DPH5	P32469	300 aa	Predicted RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms