RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C TY1A-AP0CX57 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-PR1P0CX58 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-ORP0CX59 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-PR2P0CX60 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-DR5P0CX65 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-ER2P0CX66 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-GR3P0CX67 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-LR1P0CX68 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-MR2P0CX69 440 aa3.84□□□□□ -1.79
BRE4YDL231C YMC1P32331 307 aa3.84□□□□□ -1.79
BRE4YDL231C HSP150P32478 413 aa3.84□□□□□ -1.79
BRE4YDL231C BCK2P33306 851 aa3.84□□□□□ -1.79
BRE4YDL231C SPT10P35208 640 aa3.84□□□□□ -1.79
BRE4YDL231C CCZ1P38273 704 aa3.84□□□□□ -1.79
BRE4YDL231C GOS1P38736 223 aa3.84□□□□□ -1.79
BRE4YDL231C PRP39P39682 629 aaKnown RBP3.84□□□□□ -1.79
BRE4YDL231C DDI1P40087 428 aa3.84□□□□□ -1.79
BRE4YDL231C FET5P43561 622 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-JR2P47099 440 aa3.84□□□□□ -1.79
BRE4YDL231C MRPL50P53724 139 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-DR1Q03856 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-ML1Q04706 440 aaKnown RBP3.84□□□□□ -1.79
BRE4YDL231C IPK1Q06667 281 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-BRQ12217 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-NL2Q12470 440 aa3.84□□□□□ -1.79
BRE4YDL231C TY1A-GR2Q12485 440 aa3.84□□□□□ -1.79
BRE4YDL231C GPM1P00950 247 aaKnown RBP3.83□□□□□ -1.8
BRE4YDL231C HYM1P32464 399 aa3.83□□□□□ -1.8
BRE4YDL231C TIM12P32830 109 aa3.83□□□□□ -1.8
BRE4YDL231C VPS17P32913 551 aa3.83□□□□□ -1.8
BRE4YDL231C HSV2P50079 448 aaPredicted RBP3.83□□□□□ -1.8
BRE4YDL231C DOC1P53068 250 aa3.83□□□□□ -1.8
BRE4YDL231C YGR054WP53235 642 aaKnown RBP3.83□□□□□ -1.8
BRE4YDL231C YGR067CP53243 804 aa3.83□□□□□ -1.8
BRE4YDL231C MPA43P53583 542 aaPredicted RBP3.83□□□□□ -1.8
BRE4YDL231C YNR014WP53719 212 aa3.83□□□□□ -1.8
BRE4YDL231C RHO3Q00245 231 aaKnown RBP3.83□□□□□ -1.8
BRE4YDL231C SCS7Q03529 384 aa3.83□□□□□ -1.8
BRE4YDL231C URC2Q04411 772 aa3.83□□□□□ -1.8
BRE4YDL231C AGE1Q04412 482 aa3.83□□□□□ -1.8
BRE4YDL231C ISR1Q06098 443 aaKnown RBP3.83□□□□□ -1.8
BRE4YDL231C YPQ2Q06328 317 aa3.83□□□□□ -1.8
BRE4YDL231C TAZ1Q06510 381 aa3.83□□□□□ -1.8
BRE4YDL231C AIM6Q07716 390 aa3.83□□□□□ -1.8
BRE4YDL231C BSC6Q08280 497 aa3.83□□□□□ -1.8
BRE4YDL231C RPB8P20436 146 aa3.83□□□□□ -1.8
BRE4YDL231C PAU24P38155 120 aa3.83□□□□□ -1.8
BRE4YDL231C SKN7P38889 622 aa3.83□□□□□ -1.8
BRE4YDL231C MLH1P38920 769 aa3.83□□□□□ -1.8
BRE4YDL231C BAP3P41815 604 aa3.83□□□□□ -1.8
BRE4YDL231C IDS2P46958 469 aa3.83□□□□□ -1.8
BRE4YDL231C UBX6P47049 396 aa3.83□□□□□ -1.8
BRE4YDL231C AAD10P47182 288 aa3.83□□□□□ -1.8
BRE4YDL231C COS10P52924 374 aa3.83□□□□□ -1.8
BRE4YDL231C GIS1Q03833 894 aa3.83□□□□□ -1.8
BRE4YDL231C YMR310CQ04867 317 aaPredicted RBP3.83□□□□□ -1.8
BRE4YDL231C SEI1Q06058 285 aa3.83□□□□□ -1.8
BRE4YDL231C IRC13Q08630 104 aa3.83□□□□□ -1.8
BRE4YDL231C CDC9P04819 755 aa3.83□□□□□ -1.8
BRE4YDL231C SIR2P06700 562 aa3.83□□□□□ -1.8
BRE4YDL231C CTA1P15202 515 aa3.83□□□□□ -1.8
BRE4YDL231C PCL1P24867 279 aa3.83□□□□□ -1.8
BRE4YDL231C CHK1P38147 527 aa3.83□□□□□ -1.8
BRE4YDL231C MAL32P38158 584 aa3.83□□□□□ -1.8
BRE4YDL231C ANS1P38832 159 aa3.83□□□□□ -1.8
BRE4YDL231C ISC1P40015 477 aaKnown RBP3.83□□□□□ -1.8
BRE4YDL231C AAD14P42884 376 aa3.83□□□□□ -1.8
BRE4YDL231C MAL12P53341 584 aa3.83□□□□□ -1.8
BRE4YDL231C ERB1Q04660 807 aaKnown RBP3.83□□□□□ -1.8
BRE4YDL231C SYC1Q08553 188 aaPredicted RBP3.83□□□□□ -1.8
BRE4YDL231C SKM1Q12469 655 aa3.83□□□□□ -1.8
BRE4YDL231C MDH1P17505 334 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
BRE4YDL231C PRE9P23638 258 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C YCR006CP25350 157 aa3.82□□□□□ -1.8
BRE4YDL231C ALG3P38179 458 aa3.82□□□□□ -1.8
BRE4YDL231C PFS2P42841 465 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C ECL1P48235 211 aa3.82□□□□□ -1.8
BRE4YDL231C EXG2P52911 562 aa3.82□□□□□ -1.8
BRE4YDL231C BUD25P85052 153 aa3.82□□□□□ -1.8
BRE4YDL231C RRN11Q04712 507 aa3.82□□□□□ -1.8
BRE4YDL231C AIR2Q12476 344 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C CDC39P25655 2108 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C ADH7P25377 361 aa3.82□□□□□ -1.8
BRE4YDL231C PUT3P25502 979 aaPredicted RBP3.82□□□□□ -1.8
BRE4YDL231C ATG22P25568 528 aa3.82□□□□□ -1.8
BRE4YDL231C MIA40P36046 403 aa3.82□□□□□ -1.8
BRE4YDL231C GIP2P40036 548 aa3.82□□□□□ -1.8
BRE4YDL231C PCL6P40038 420 aa3.82□□□□□ -1.8
BRE4YDL231C YER137CP40083 148 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C RFC4P40339 323 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C SNM1P40993 198 aa3.82□□□□□ -1.8
BRE4YDL231C CAT5P41735 233 aa3.82□□□□□ -1.8
BRE4YDL231C ADO1P47143 340 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C RMD9P53140 646 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C IMO32P53219 342 aa3.82□□□□□ -1.8
BRE4YDL231C SRL4Q03085 281 aa3.82□□□□□ -1.8
BRE4YDL231C YDL114WQ07530 308 aa3.82□□□□□ -1.8
BRE4YDL231C YOR283WQ12040 230 aaKnown RBP3.82□□□□□ -1.8
BRE4YDL231C HMS1Q12398 434 aa3.82□□□□□ -1.8
BRE4YDL231C YPL119C-AQ3E751 87 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms