RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C VBA4Q04602 768 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C SWF1Q04629 336 aa5.07□□□□□ -1.6
RFA1YAR007C PUN1Q06991 263 aa5.07□□□□□ -1.6
RFA1YAR007C PER33Q12144 273 aa5.07□□□□□ -1.6
RFA1YAR007C YLR046CQ12253 270 aa5.07□□□□□ -1.6
RFA1YAR007C TRM13Q12383 476 aa5.07□□□□□ -1.6
RFA1YAR007C QCR7P00128 127 aa5.06□□□□□ -1.6
RFA1YAR007C RPS9BP05755 195 aaKnown RBP5.06□□□□□ -1.6
RFA1YAR007C PHO2P07269 559 aa5.06□□□□□ -1.6
RFA1YAR007C MIH1P23748 554 aa5.06□□□□□ -1.6
RFA1YAR007C GPI12P23797 304 aa5.06□□□□□ -1.6
RFA1YAR007C BUB3P26449 341 aa5.06□□□□□ -1.6
RFA1YAR007C TIP1P27654 210 aaPredicted RBP5.06□□□□□ -1.6
RFA1YAR007C YMC1P32331 307 aa5.06□□□□□ -1.6
RFA1YAR007C SRP102P36057 244 aaPredicted RBP5.06□□□□□ -1.6
RFA1YAR007C YHL026CP38740 315 aa5.06□□□□□ -1.6
RFA1YAR007C FAU1P40099 211 aa5.06□□□□□ -1.6
RFA1YAR007C RPL34BP40525 121 aaKnown RBP5.06□□□□□ -1.6
RFA1YAR007C SNM1P40993 198 aa5.06□□□□□ -1.6
RFA1YAR007C SIP4P46954 829 aa5.06□□□□□ -1.6
RFA1YAR007C PAC10P48363 199 aa5.06□□□□□ -1.6
RFA1YAR007C MNT2P53059 558 aa5.06□□□□□ -1.6
RFA1YAR007C YGL117WP53133 265 aa5.06□□□□□ -1.6
RFA1YAR007C NRK1P53915 240 aa5.06□□□□□ -1.6
RFA1YAR007C MTQ1P53944 314 aa5.06□□□□□ -1.6
RFA1YAR007C SEN15Q04675 128 aa5.06□□□□□ -1.6
RFA1YAR007C BOP2Q06150 570 aa5.06□□□□□ -1.6
RFA1YAR007C NMA1Q06178 401 aaKnown RBP5.06□□□□□ -1.6
RFA1YAR007C YPR127WQ06494 345 aa5.06□□□□□ -1.6
RFA1YAR007C LUC7Q07508 261 aaPredicted RBP5.06□□□□□ -1.6
RFA1YAR007C SPC3Q12133 184 aa5.06□□□□□ -1.6
RFA1YAR007C PEX11Q12462 236 aa5.06□□□□□ -1.6
RFA1YAR007C FRE6Q12473 712 aa5.06□□□□□ -1.6
RFA1YAR007C YDL007C-AQ2V2Q0 85 aa5.06□□□□□ -1.6
RFA1YAR007C YGR161W-CQ3E744 92 aa5.06□□□□□ -1.6
RFA1YAR007C FSH3Q99369 266 aa5.06□□□□□ -1.6
RFA1YAR007C CAN1P04817 590 aa5.05□□□□□ -1.6
RFA1YAR007C ADK1P07170 222 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C SSA3P09435 649 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C HOM2P13663 365 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C RPD3P32561 433 aa5.05□□□□□ -1.6
RFA1YAR007C PAU2P32612 120 aa5.05□□□□□ -1.6
RFA1YAR007C SPT10P35208 640 aa5.05□□□□□ -1.6
RFA1YAR007C TCD2P36101 447 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C IRS4P36115 615 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C VMA21P41806 77 aa5.05□□□□□ -1.6
RFA1YAR007C YJR120WP47157 116 aa5.05□□□□□ -1.6
RFA1YAR007C DAN1P47178 298 aa5.05□□□□□ -1.6
RFA1YAR007C PKP2P53170 491 aa5.05□□□□□ -1.6
RFA1YAR007C RSM27P53305 110 aa5.05□□□□□ -1.6
RFA1YAR007C YDR387CQ04162 555 aa5.05□□□□□ -1.6
RFA1YAR007C BTS1Q12051 335 aa5.05□□□□□ -1.6
RFA1YAR007C PUS9Q12069 462 aa5.05□□□□□ -1.6
RFA1YAR007C AI1P03875 834 aa5.05□□□□□ -1.6
RFA1YAR007C SST2P11972 698 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C APA1P16550 321 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C AVT5P38176 459 aa5.05□□□□□ -1.6
RFA1YAR007C AIM3P38266 947 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C INM1P38710 295 aa5.05□□□□□ -1.6
RFA1YAR007C NIT2P47016 307 aa5.05□□□□□ -1.6
RFA1YAR007C UBX6P47049 396 aa5.05□□□□□ -1.6
RFA1YAR007C BUL1P48524 976 aa5.05□□□□□ -1.6
RFA1YAR007C MDM34P53083 459 aa5.05□□□□□ -1.6
RFA1YAR007C VHT1P53241 593 aa5.05□□□□□ -1.6
RFA1YAR007C YKR011CQ02209 353 aa5.05□□□□□ -1.6
RFA1YAR007C ARG7Q04728 441 aa5.05□□□□□ -1.6
RFA1YAR007C YMR315WQ04869 349 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C YLR225CQ05948 407 aaKnown RBP5.05□□□□□ -1.6
RFA1YAR007C EAF1Q06337 982 aa5.05□□□□□ -1.6
RFA1YAR007C YLR012CQ07927 99 aa5.05□□□□□ -1.6
RFA1YAR007C YOR352WQ08816 343 aa5.05□□□□□ -1.6
RFA1YAR007C TFC7Q12415 435 aa5.05□□□□□ -1.6
RFA1YAR007C BOS1P25385 244 aa5.04□□□□□ -1.6
RFA1YAR007C MSK1P32048 576 aa5.04□□□□□ -1.6
RFA1YAR007C TIM23P32897 222 aa5.04□□□□□ -1.6
RFA1YAR007C SDH4P37298 181 aa5.04□□□□□ -1.6
RFA1YAR007C BSD2P38356 321 aa5.04□□□□□ -1.6
RFA1YAR007C PCL5P38794 229 aa5.04□□□□□ -1.6
RFA1YAR007C SDP1P40479 209 aa5.04□□□□□ -1.6
RFA1YAR007C LYS12P40495 371 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C ALK1P43633 760 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C NNF1P47149 201 aa5.04□□□□□ -1.6
RFA1YAR007C YJR149WP47177 404 aa5.04□□□□□ -1.6
RFA1YAR007C NUP57P48837 541 aa5.04□□□□□ -1.6
RFA1YAR007C COS12P53053 380 aa5.04□□□□□ -1.6
RFA1YAR007C YGR042WP53227 271 aa5.04□□□□□ -1.6
RFA1YAR007C COQ6P53318 479 aa5.04□□□□□ -1.6
RFA1YAR007C BIO5P53744 561 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C RHO4Q00246 291 aa5.04□□□□□ -1.6
RFA1YAR007C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
RFA1YAR007C MSC1Q03104 513 aa5.04□□□□□ -1.6
RFA1YAR007C YMR265CQ03508 461 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C RBS1Q05672 457 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C NOC4Q06512 552 aaPredicted RBP5.04□□□□□ -1.6
RFA1YAR007C THI73Q07904 523 aa5.04□□□□□ -1.6
RFA1YAR007C PML1Q07930 204 aaPredicted RBP5.04□□□□□ -1.6
RFA1YAR007C SDO1Q07953 250 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C GLO4Q12320 285 aa5.04□□□□□ -1.6
RFA1YAR007C LPX1Q12405 387 aaKnown RBP5.04□□□□□ -1.6
RFA1YAR007C PRM4Q12498 284 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms