RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W RRT12P25381 491 aa3.24□□□□□ -1.89
USV1YPL230W YCR016WP25617 290 aaKnown RBP3.24□□□□□ -1.89
USV1YPL230W CPR3P25719 182 aa3.24□□□□□ -1.89
USV1YPL230W ARO2P28777 376 aaKnown RBP3.24□□□□□ -1.89
USV1YPL230W MEI5P32489 222 aa3.24□□□□□ -1.89
USV1YPL230W BMH2P34730 273 aaKnown RBP3.24□□□□□ -1.89
USV1YPL230W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
USV1YPL230W YKL063CP35725 167 aa3.24□□□□□ -1.89
USV1YPL230W CAB3P36076 571 aa3.24□□□□□ -1.89
USV1YPL230W ANR2P36090 516 aaPredicted RBP3.24□□□□□ -1.89
USV1YPL230W AIM29P36154 155 aa3.24□□□□□ -1.89
USV1YPL230W PRS4P38063 326 aaPredicted RBP3.24□□□□□ -1.89
USV1YPL230W RCK2P38623 610 aa3.24□□□□□ -1.89
USV1YPL230W TDA11P38854 504 aa3.24□□□□□ -1.89
USV1YPL230W NPT1P39683 429 aaKnown RBP3.24□□□□□ -1.89
USV1YPL230W DFG10P40526 253 aa3.24□□□□□ -1.89
USV1YPL230W YNL320WP42840 284 aa3.24□□□□□ -1.89
USV1YPL230W ATG18P43601 500 aa3.24□□□□□ -1.89
USV1YPL230W YFR057WP43625 151 aa3.24□□□□□ -1.89
USV1YPL230W BIR1P47134 954 aa3.24□□□□□ -1.89
USV1YPL230W CLD1P53264 445 aa3.24□□□□□ -1.89
USV1YPL230W HCH1P53834 153 aa3.24□□□□□ -1.89
USV1YPL230W MCT1Q12283 360 aa3.24□□□□□ -1.89
USV1YPL230W YOS9Q99220 542 aa3.24□□□□□ -1.89
USV1YPL230W REP1P03871 373 aa3.23□□□□□ -1.89
USV1YPL230W RPL31AP0C2H8 113 aaKnown RBP3.23□□□□□ -1.89
USV1YPL230W CDC42P19073 191 aa3.23□□□□□ -1.89
USV1YPL230W PMT2P31382 759 aa3.23□□□□□ -1.89
USV1YPL230W CBF5P33322 483 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
USV1YPL230W MCH2P36032 473 aa3.23□□□□□ -1.89
USV1YPL230W YNL208WP40159 199 aaKnown RBP3.23□□□□□ -1.89
USV1YPL230W TIS11P47977 285 aa3.23□□□□□ -1.89
USV1YPL230W MRPL50P53724 139 aa3.23□□□□□ -1.89
USV1YPL230W KTR6P54070 446 aa3.23□□□□□ -1.89
USV1YPL230W KRE28Q04431 385 aa3.23□□□□□ -1.89
USV1YPL230W ASR1Q06834 288 aa3.23□□□□□ -1.89
USV1YPL230W PAM18Q07914 168 aa3.23□□□□□ -1.89
USV1YPL230W IRC25Q07951 179 aa3.23□□□□□ -1.89
USV1YPL230W RDL2Q08742 149 aaKnown RBP3.23□□□□□ -1.89
USV1YPL230W JID1Q12350 301 aa3.23□□□□□ -1.89
USV1YPL230W PRM4Q12498 284 aa3.23□□□□□ -1.89
USV1YPL230W TDH2P00358 332 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W MET16P18408 261 aaPredicted RBP3.22□□□□□ -1.89
USV1YPL230W MIR1P23641 311 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W KRE6P32486 720 aa3.22□□□□□ -1.89
USV1YPL230W SRB4P32569 687 aa3.22□□□□□ -1.89
USV1YPL230W PRS1P32895 427 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W RPC37P36121 282 aa3.22□□□□□ -1.89
USV1YPL230W LSM12P38828 187 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W SWC4P53201 476 aa3.22□□□□□ -1.89
USV1YPL230W SUR7P54003 302 aa3.22□□□□□ -1.89
USV1YPL230W INP2Q03824 705 aa3.22□□□□□ -1.89
USV1YPL230W SNX41Q04053 625 aa3.22□□□□□ -1.89
USV1YPL230W GTO3Q04806 366 aa3.22□□□□□ -1.89
USV1YPL230W ADH6Q04894 360 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W DTD1Q07648 150 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W CMS1Q07897 291 aaKnown RBP3.22□□□□□ -1.89
USV1YPL230W ATP16Q12165 160 aa3.22□□□□□ -1.89
USV1YPL230W HMS1Q12398 434 aa3.22□□□□□ -1.89
USV1YPL230W NAG1Q8TGN9 163 aa3.22□□□□□ -1.89
USV1YPL230W HIS1P00498 297 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W MRP1P10662 321 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W SPS100P13130 326 aa3.21□□□□□ -1.9
USV1YPL230W CTA1P15202 515 aa3.21□□□□□ -1.9
USV1YPL230W VPS1P21576 704 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W RPS5P26783 225 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W PRR1P28708 518 aa3.21□□□□□ -1.9
USV1YPL230W CSE1P33307 960 aa3.21□□□□□ -1.9
USV1YPL230W YKL071WP36086 256 aa3.21□□□□□ -1.9
USV1YPL230W MRPL10P36520 322 aa3.21□□□□□ -1.9
USV1YPL230W BIG1P38813 335 aa3.21□□□□□ -1.9
USV1YPL230W BAT1P38891 393 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W AIM10P39965 576 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W ALD5P40047 520 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W COA1P40452 197 aa3.21□□□□□ -1.9
USV1YPL230W YGR210CP42942 411 aa3.21□□□□□ -1.9
USV1YPL230W UBC13P52490 153 aa3.21□□□□□ -1.9
USV1YPL230W GIM3P53900 129 aa3.21□□□□□ -1.9
USV1YPL230W VAC7P53950 1165 aa3.21□□□□□ -1.9
USV1YPL230W VBA1Q04301 562 aa3.21□□□□□ -1.9
USV1YPL230W TAF10Q12030 206 aa3.21□□□□□ -1.9
USV1YPL230W YOR029WQ12243 111 aa3.21□□□□□ -1.9
USV1YPL230W UTP23Q12339 254 aaKnown RBP3.21□□□□□ -1.9
USV1YPL230W YBL111CQ3E7Y5 667 aa3.21□□□□□ -1.9
USV1YPL230W ILV1P00927 576 aaKnown RBP3.2□□□□□ -1.9
USV1YPL230W MRPL25P23369 157 aa3.2□□□□□ -1.9
USV1YPL230W PDC2P32896 925 aa3.2□□□□□ -1.9
USV1YPL230W SWD3P38123 315 aa3.2□□□□□ -1.9
USV1YPL230W SIP3P38717 1229 aa3.2□□□□□ -1.9
USV1YPL230W SOP4P39543 234 aaPredicted RBP3.2□□□□□ -1.9
USV1YPL230W OXA1P39952 402 aa3.2□□□□□ -1.9
USV1YPL230W DDI1P40087 428 aa3.2□□□□□ -1.9
USV1YPL230W YER186CP40101 306 aa3.2□□□□□ -1.9
USV1YPL230W MOB2P43563 287 aa3.2□□□□□ -1.9
USV1YPL230W CPD1P53314 239 aa3.2□□□□□ -1.9
USV1YPL230W SKI8Q02793 397 aaPredicted RBP3.2□□□□□ -1.9
USV1YPL230W MRPS17Q03246 237 aaPredicted RBP3.2□□□□□ -1.9
USV1YPL230W FSH2Q05015 223 aa3.2□□□□□ -1.9
USV1YPL230W MRX9Q07349 420 aaKnown RBP3.2□□□□□ -1.9
USV1YPL230W TLG2Q08144 397 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 351.3 ms