RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W RIP1P08067 215 aa3.44□□□□□ -1.86
SWI1YPL016W MDH1P17505 334 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SWI1YPL016W MAG1P22134 296 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W GRR1P24814 1151 aa3.44□□□□□ -1.86
SWI1YPL016W SAT4P25333 603 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W PRE4P30657 266 aa3.44□□□□□ -1.86
SWI1YPL016W CCL1P37366 393 aa3.44□□□□□ -1.86
SWI1YPL016W SFB3P38810 929 aa3.44□□□□□ -1.86
SWI1YPL016W SKY1Q03656 742 aa3.44□□□□□ -1.86
SWI1YPL016W GAL80P04387 435 aa3.44□□□□□ -1.86
SWI1YPL016W IMA3P0CW40 589 aa3.44□□□□□ -1.86
SWI1YPL016W IMA4P0CW41 589 aa3.44□□□□□ -1.86
SWI1YPL016W NOP1P15646 327 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W FEN2P25621 512 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W BNA4P38169 460 aa3.44□□□□□ -1.86
SWI1YPL016W MTC4P38335 694 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W YHR122WP38829 231 aa3.44□□□□□ -1.86
SWI1YPL016W NTA1P40354 457 aa3.44□□□□□ -1.86
SWI1YPL016W ECM27P47144 725 aa3.44□□□□□ -1.86
SWI1YPL016W FAA4P47912 694 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W SOK2P53438 785 aaPredicted RBP3.44□□□□□ -1.86
SWI1YPL016W IMA2Q08295 589 aa3.44□□□□□ -1.86
SWI1YPL016W RPN5Q12250 445 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W PCD1Q12524 340 aa3.44□□□□□ -1.86
SWI1YPL016W PNO1Q99216 274 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W YLR149CQ99296 730 aa3.44□□□□□ -1.86
SWI1YPL016W BCY1P07278 416 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W TY1A-HP0C2I4 478 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W ARO2P28777 376 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W SUA5P32579 426 aa3.43□□□□□ -1.86
SWI1YPL016W TMA19P35691 167 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W OMA1P36163 345 aa3.43□□□□□ -1.86
SWI1YPL016W SOL3P38858 249 aa3.43□□□□□ -1.86
SWI1YPL016W HPA3P39979 161 aa3.43□□□□□ -1.86
SWI1YPL016W MND2P40577 368 aa3.43□□□□□ -1.86
SWI1YPL016W YJR030CP47101 745 aa3.43□□□□□ -1.86
SWI1YPL016W FLC3P53121 802 aa3.43□□□□□ -1.86
SWI1YPL016W TRM112P53738 135 aaPredicted RBP3.43□□□□□ -1.86
SWI1YPL016W TEX1P53851 422 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W TY1A-DR2Q03964 440 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W SRF1Q12516 437 aa3.43□□□□□ -1.86
SWI1YPL016W HXK2P04807 486 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W CKA1P15790 372 aa3.43□□□□□ -1.86
SWI1YPL016W GPI12P23797 304 aa3.43□□□□□ -1.86
SWI1YPL016W RPL8BP29453 256 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W MRPL6P32904 214 aa3.43□□□□□ -1.86
SWI1YPL016W WBP1P33767 430 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W REG2P38232 338 aa3.43□□□□□ -1.86
SWI1YPL016W YBR220CP38318 560 aa3.43□□□□□ -1.86
SWI1YPL016W SAF1P38352 637 aa3.43□□□□□ -1.86
SWI1YPL016W MDM31P38880 579 aa3.43□□□□□ -1.86
SWI1YPL016W JHD1P40034 492 aa3.43□□□□□ -1.86
SWI1YPL016W NAS2P40555 220 aa3.43□□□□□ -1.86
SWI1YPL016W OST3P48439 350 aa3.43□□□□□ -1.86
SWI1YPL016W NUP57P48837 541 aa3.43□□□□□ -1.86
SWI1YPL016W FPK1P53739 893 aa3.43□□□□□ -1.86
SWI1YPL016W YNL095CP53932 642 aa3.43□□□□□ -1.86
SWI1YPL016W INP1Q03694 420 aa3.43□□□□□ -1.86
SWI1YPL016W YDR124WQ04608 324 aa3.43□□□□□ -1.86
SWI1YPL016W NEJ1Q06148 342 aa3.43□□□□□ -1.86
SWI1YPL016W SRO7Q12038 1033 aa3.43□□□□□ -1.86
SWI1YPL016W MRX4Q12467 430 aa3.43□□□□□ -1.86
SWI1YPL016W CIT1P00890 479 aa3.43□□□□□ -1.86
SWI1YPL016W APE1P14904 514 aa3.43□□□□□ -1.86
SWI1YPL016W FUN14P18411 198 aa3.43□□□□□ -1.86
SWI1YPL016W MRP20P32387 263 aa3.43□□□□□ -1.86
SWI1YPL016W IRS4P36115 615 aaKnown RBP3.43□□□□□ -1.86
SWI1YPL016W YER121WP40076 114 aa3.43□□□□□ -1.86
SWI1YPL016W SCC4P40090 624 aa3.43□□□□□ -1.86
SWI1YPL016W BNS1P50084 137 aa3.43□□□□□ -1.86
SWI1YPL016W PHO23P50947 330 aa3.43□□□□□ -1.86
SWI1YPL016W PRM8P53174 237 aa3.43□□□□□ -1.86
SWI1YPL016W YPL067CQ02754 198 aa3.43□□□□□ -1.86
SWI1YPL016W ARG7Q04728 441 aa3.43□□□□□ -1.86
SWI1YPL016W ECM22Q05958 814 aaPredicted RBP3.43□□□□□ -1.86
SWI1YPL016W NUT2Q06213 157 aa3.43□□□□□ -1.86
SWI1YPL016W THP1Q08231 455 aa3.43□□□□□ -1.86
SWI1YPL016W PSF1Q12488 208 aa3.43□□□□□ -1.86
SWI1YPL016W COX6P00427 148 aa3.42□□□□□ -1.86
SWI1YPL016W MSS18P08593 268 aa3.42□□□□□ -1.86
SWI1YPL016W RPS25BP0C0T4 108 aaKnown RBP3.42□□□□□ -1.86
SWI1YPL016W PRE8P23639 250 aa3.42□□□□□ -1.86
SWI1YPL016W SRP68P38687 599 aaKnown RBP3.42□□□□□ -1.86
SWI1YPL016W KHA1P40309 873 aa3.42□□□□□ -1.86
SWI1YPL016W SMK1P41808 388 aa3.42□□□□□ -1.86
SWI1YPL016W YGR111WP53265 400 aa3.42□□□□□ -1.86
SWI1YPL016W MPA43P53583 542 aaPredicted RBP3.42□□□□□ -1.86
SWI1YPL016W SMA1Q02651 245 aa3.42□□□□□ -1.86
SWI1YPL016W YPL199CQ08954 240 aa3.42□□□□□ -1.86
SWI1YPL016W YOP1Q12402 180 aa3.42□□□□□ -1.86
SWI1YPL016W RPS25AQ3E792 108 aaPredicted RBP3.42□□□□□ -1.86
SWI1YPL016W CDC28P00546 298 aaKnown RBP3.42□□□□□ -1.86
SWI1YPL016W FBA1P14540 359 aaKnown RBP3.42□□□□□ -1.86
SWI1YPL016W SNF6P18888 332 aa3.42□□□□□ -1.86
SWI1YPL016W DBF4P32325 704 aa3.42□□□□□ -1.86
SWI1YPL016W CKB2P38930 258 aa3.42□□□□□ -1.86
SWI1YPL016W VAC8P39968 578 aa3.42□□□□□ -1.86
SWI1YPL016W PCL7P40186 285 aa3.42□□□□□ -1.86
SWI1YPL016W HXT8P40886 569 aa3.42□□□□□ -1.86
SWI1YPL016W YGR201CP42936 225 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms