RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	YBR032W	P38223	100 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	PHO89	P38361	574 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	YHR127W	P38833	243 aa	Known RBP	3.13	□□□□□ -1.91
RPA43	YOR340C	LYS1	P38998	373 aa	RIP-Chip data	3.13	□□□□□ -1.91	not detected
RPA43	YOR340C	GIM4	P40005	111 aa	Known RBP	3.13	□□□□□ -1.91
RPA43	YOR340C	SHO1	P40073	367 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	PHB2	P50085	310 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	AVT4	P50944	713 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	AIF1	P52923	378 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	POP6	P53218	158 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	CLD1	P53264	445 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	GPI15	P53961	229 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	RPL6A	Q02326	176 aa	Known RBP	3.13	□□□□□ -1.91
RPA43	YOR340C	RPM2	Q02773	1202 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	YDR541C	Q03049	344 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	CCE1	Q03702	353 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	STE23	Q06010	1027 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	YLR177W	Q06251	628 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	NDL1	Q06568	189 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	MDY2	Q12285	212 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	YDR061W	Q12298	539 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	YDR262W	Q12331	272 aa		3.13	□□□□□ -1.91
RPA43	YOR340C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.13	□□□□□ -1.91
RPA43	YOR340C	NFT1	P0CE68	1218 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	MRPL25	P23369	157 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	PHA2	P32452	334 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	YPT52	P36018	234 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	TRM7	P38238	310 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	GDT1	P38301	280 aa	Predicted RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	STP2	P38704	541 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	INM1	P38710	295 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	YHR045W	P38775	560 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	MNL1	P38888	796 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	NPT1	P39683	429 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	COA1	P40452	197 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	SPG5	P42933	373 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	MPS2	P53159	387 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	YGR015C	P53208	328 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	RHO3	Q00245	231 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	EGD1	Q02642	157 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	RMI1	Q02685	241 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	ODC1	Q03028	310 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	GAS3	Q03655	524 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	SNT309	Q06091	175 aa	Predicted RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	DBP9	Q06218	594 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	YFH1	Q07540	174 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	BSC6	Q08280	497 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	SGT1	Q08446	395 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	YPR022C	Q12139	1133 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	RUP1	Q12242	671 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	ORT1	Q12375	292 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	RRP12	Q12754	1228 aa	Known RBP	3.12	□□□□□ -1.91
RPA43	YOR340C	YKL068W-A	Q3E826	78 aa		3.12	□□□□□ -1.91
RPA43	YOR340C	RPL15A	P05748	204 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	STE3	P06783	470 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	SPT3	P06844	337 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	DAL82	P21705	255 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	LSB5	P25369	354 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	TIP1	P27654	210 aa	Predicted RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	CRM1	P30822	1084 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	CYS4	P32582	507 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	GLC7	P32598	312 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	SKT5	P34226	696 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	PMU1	P36069	295 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	QDR3	P38227	689 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	MTC4	P38335	694 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	GGC1	P38988	300 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	POP2	P39008	433 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	DHH1	P39517	506 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	GCD14	P46959	383 aa	Predicted RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	YIP5	P53108	310 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	IBD2	P53892	351 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	MRP51	Q02950	344 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	HPT1	Q04178	221 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	YPL245W	Q12179	454 aa	Known RBP	3.11	□□□□□ -1.91
RPA43	YOR340C	YOL107W	Q12239	342 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	ATG34	Q12292	412 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	MHT1	Q12525	324 aa		3.11	□□□□□ -1.91
RPA43	YOR340C	DST1	P07273	309 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	GAL7	P08431	366 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	RPL20A	P0CX23	172 aa	Known RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	RPL20B	P0CX24	172 aa	Predicted RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	PUT3	P25502	979 aa	Predicted RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	YCR090C	P25654	182 aa	Known RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	ATS1	P31386	333 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	SFC1	P33303	322 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	KKQ8	P36004	724 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	YHB1	P39676	399 aa	Known RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	MEP1	P40260	492 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	YRB1	P41920	201 aa	Known RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	YJR030C	P47101	745 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	LIA1	P47120	325 aa	Known RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	YJR149W	P47177	404 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	YPT32	P51996	222 aa	Known RBP	3.1	□□□□□ -1.91
RPA43	YOR340C	SHY1	P53266	389 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	RSN1	Q03516	953 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	BET5	Q03630	159 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	VHS1	Q03785	461 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	FAR8	Q05040	523 aa		3.1	□□□□□ -1.91
RPA43	YOR340C	PML1	Q07930	204 aa	Predicted RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms