RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C YBR032WP38223 100 aa3.13□□□□□ -1.91
RPA43YOR340C PHO89P38361 574 aa3.13□□□□□ -1.91
RPA43YOR340C YHR127WP38833 243 aaKnown RBP3.13□□□□□ -1.91
RPA43YOR340C LYS1P38998 373 aaRIP-Chip data3.13□□□□□ -1.91not detected
RPA43YOR340C GIM4P40005 111 aaKnown RBP3.13□□□□□ -1.91
RPA43YOR340C SHO1P40073 367 aa3.13□□□□□ -1.91
RPA43YOR340C PHB2P50085 310 aa3.13□□□□□ -1.91
RPA43YOR340C AVT4P50944 713 aa3.13□□□□□ -1.91
RPA43YOR340C AIF1P52923 378 aa3.13□□□□□ -1.91
RPA43YOR340C POP6P53218 158 aa3.13□□□□□ -1.91
RPA43YOR340C CLD1P53264 445 aa3.13□□□□□ -1.91
RPA43YOR340C GPI15P53961 229 aa3.13□□□□□ -1.91
RPA43YOR340C RPL6AQ02326 176 aaKnown RBP3.13□□□□□ -1.91
RPA43YOR340C RPM2Q02773 1202 aa3.13□□□□□ -1.91
RPA43YOR340C YDR541CQ03049 344 aa3.13□□□□□ -1.91
RPA43YOR340C CCE1Q03702 353 aa3.13□□□□□ -1.91
RPA43YOR340C STE23Q06010 1027 aa3.13□□□□□ -1.91
RPA43YOR340C YLR177WQ06251 628 aa3.13□□□□□ -1.91
RPA43YOR340C NDL1Q06568 189 aa3.13□□□□□ -1.91
RPA43YOR340C MDY2Q12285 212 aa3.13□□□□□ -1.91
RPA43YOR340C YDR061WQ12298 539 aa3.13□□□□□ -1.91
RPA43YOR340C YDR262WQ12331 272 aa3.13□□□□□ -1.91
RPA43YOR340C TFB5Q3E7C1 72 aaPredicted RBP3.13□□□□□ -1.91
RPA43YOR340C NFT1P0CE68 1218 aa3.12□□□□□ -1.91
RPA43YOR340C MRPL25P23369 157 aa3.12□□□□□ -1.91
RPA43YOR340C PHA2P32452 334 aa3.12□□□□□ -1.91
RPA43YOR340C YPT52P36018 234 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C TRM7P38238 310 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C GDT1P38301 280 aaPredicted RBP3.12□□□□□ -1.91
RPA43YOR340C STP2P38704 541 aa3.12□□□□□ -1.91
RPA43YOR340C INM1P38710 295 aa3.12□□□□□ -1.91
RPA43YOR340C YHR045WP38775 560 aa3.12□□□□□ -1.91
RPA43YOR340C MNL1P38888 796 aa3.12□□□□□ -1.91
RPA43YOR340C NPT1P39683 429 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C COA1P40452 197 aa3.12□□□□□ -1.91
RPA43YOR340C SPG5P42933 373 aa3.12□□□□□ -1.91
RPA43YOR340C MPS2P53159 387 aa3.12□□□□□ -1.91
RPA43YOR340C YGR015CP53208 328 aa3.12□□□□□ -1.91
RPA43YOR340C RHO3Q00245 231 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C EGD1Q02642 157 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C RMI1Q02685 241 aa3.12□□□□□ -1.91
RPA43YOR340C ODC1Q03028 310 aa3.12□□□□□ -1.91
RPA43YOR340C GAS3Q03655 524 aa3.12□□□□□ -1.91
RPA43YOR340C SNT309Q06091 175 aaPredicted RBP3.12□□□□□ -1.91
RPA43YOR340C DBP9Q06218 594 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C YFH1Q07540 174 aa3.12□□□□□ -1.91
RPA43YOR340C BSC6Q08280 497 aa3.12□□□□□ -1.91
RPA43YOR340C SGT1Q08446 395 aa3.12□□□□□ -1.91
RPA43YOR340C YPR022CQ12139 1133 aa3.12□□□□□ -1.91
RPA43YOR340C RUP1Q12242 671 aa3.12□□□□□ -1.91
RPA43YOR340C ORT1Q12375 292 aa3.12□□□□□ -1.91
RPA43YOR340C RRP12Q12754 1228 aaKnown RBP3.12□□□□□ -1.91
RPA43YOR340C YKL068W-AQ3E826 78 aa3.12□□□□□ -1.91
RPA43YOR340C RPL15AP05748 204 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C STE3P06783 470 aa3.11□□□□□ -1.91
RPA43YOR340C SPT3P06844 337 aa3.11□□□□□ -1.91
RPA43YOR340C DAL82P21705 255 aa3.11□□□□□ -1.91
RPA43YOR340C LSB5P25369 354 aa3.11□□□□□ -1.91
RPA43YOR340C TIP1P27654 210 aaPredicted RBP3.11□□□□□ -1.91
RPA43YOR340C CRM1P30822 1084 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C CYS4P32582 507 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C GLC7P32598 312 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C SKT5P34226 696 aa3.11□□□□□ -1.91
RPA43YOR340C PMU1P36069 295 aa3.11□□□□□ -1.91
RPA43YOR340C QDR3P38227 689 aa3.11□□□□□ -1.91
RPA43YOR340C MTC4P38335 694 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C GGC1P38988 300 aa3.11□□□□□ -1.91
RPA43YOR340C POP2P39008 433 aa3.11□□□□□ -1.91
RPA43YOR340C DHH1P39517 506 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C GCD14P46959 383 aaPredicted RBP3.11□□□□□ -1.91
RPA43YOR340C YIP5P53108 310 aa3.11□□□□□ -1.91
RPA43YOR340C IBD2P53892 351 aa3.11□□□□□ -1.91
RPA43YOR340C MRP51Q02950 344 aa3.11□□□□□ -1.91
RPA43YOR340C HPT1Q04178 221 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C YPL245WQ12179 454 aaKnown RBP3.11□□□□□ -1.91
RPA43YOR340C YOL107WQ12239 342 aa3.11□□□□□ -1.91
RPA43YOR340C ATG34Q12292 412 aa3.11□□□□□ -1.91
RPA43YOR340C MHT1Q12525 324 aa3.11□□□□□ -1.91
RPA43YOR340C DST1P07273 309 aa3.1□□□□□ -1.91
RPA43YOR340C GAL7P08431 366 aa3.1□□□□□ -1.91
RPA43YOR340C RPL20AP0CX23 172 aaKnown RBP3.1□□□□□ -1.91
RPA43YOR340C RPL20BP0CX24 172 aaPredicted RBP3.1□□□□□ -1.91
RPA43YOR340C PUT3P25502 979 aaPredicted RBP3.1□□□□□ -1.91
RPA43YOR340C YCR090CP25654 182 aaKnown RBP3.1□□□□□ -1.91
RPA43YOR340C ATS1P31386 333 aa3.1□□□□□ -1.91
RPA43YOR340C SFC1P33303 322 aa3.1□□□□□ -1.91
RPA43YOR340C KKQ8P36004 724 aa3.1□□□□□ -1.91
RPA43YOR340C YHB1P39676 399 aaKnown RBP3.1□□□□□ -1.91
RPA43YOR340C MEP1P40260 492 aa3.1□□□□□ -1.91
RPA43YOR340C YRB1P41920 201 aaKnown RBP3.1□□□□□ -1.91
RPA43YOR340C YJR030CP47101 745 aa3.1□□□□□ -1.91
RPA43YOR340C LIA1P47120 325 aaKnown RBP3.1□□□□□ -1.91
RPA43YOR340C YJR149WP47177 404 aa3.1□□□□□ -1.91
RPA43YOR340C YPT32P51996 222 aaKnown RBP3.1□□□□□ -1.91
RPA43YOR340C SHY1P53266 389 aa3.1□□□□□ -1.91
RPA43YOR340C RSN1Q03516 953 aa3.1□□□□□ -1.91
RPA43YOR340C BET5Q03630 159 aa3.1□□□□□ -1.91
RPA43YOR340C VHS1Q03785 461 aa3.1□□□□□ -1.91
RPA43YOR340C FAR8Q05040 523 aa3.1□□□□□ -1.91
RPA43YOR340C PML1Q07930 204 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms