RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W FBA1P14540 359 aaKnown RBP2.89□□□□□ -1.95
UBP8YMR223W HSP26P15992 214 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
UBP8YMR223W MRPL8P22353 238 aa2.89□□□□□ -1.95
UBP8YMR223W YCR100CP25606 316 aa2.89□□□□□ -1.95
UBP8YMR223W ERG9P29704 444 aa2.89□□□□□ -1.95
UBP8YMR223W VMA6P32366 345 aaKnown RBP2.89□□□□□ -1.95
UBP8YMR223W REC114P32841 428 aa2.89□□□□□ -1.95
UBP8YMR223W RRN10P38204 145 aa2.89□□□□□ -1.95
UBP8YMR223W AME1P38313 324 aa2.89□□□□□ -1.95
UBP8YMR223W SOP4P39543 234 aaPredicted RBP2.89□□□□□ -1.95
UBP8YMR223W THO1P40040 218 aaKnown RBP2.89□□□□□ -1.95
UBP8YMR223W GAT2P40209 560 aa2.89□□□□□ -1.95
UBP8YMR223W COA1P40452 197 aa2.89□□□□□ -1.95
UBP8YMR223W RSM25P40496 264 aa2.89□□□□□ -1.95
UBP8YMR223W UTP25P40498 721 aaKnown RBP2.89□□□□□ -1.95
UBP8YMR223W TFG2P41896 400 aaPredicted RBP2.89□□□□□ -1.95
UBP8YMR223W TAF6P53040 516 aa2.89□□□□□ -1.95
UBP8YMR223W ZRG17P53735 605 aa2.89□□□□□ -1.95
UBP8YMR223W MRS2Q01926 470 aa2.89□□□□□ -1.95
UBP8YMR223W YDC1Q02896 317 aa2.89□□□□□ -1.95
UBP8YMR223W BUR2Q05949 395 aa2.89□□□□□ -1.95
UBP8YMR223W FDH1Q08911 376 aa2.89□□□□□ -1.95
UBP8YMR223W SNF8Q12483 233 aa2.89□□□□□ -1.95
UBP8YMR223W SEY1Q99287 776 aa2.89□□□□□ -1.95
UBP8YMR223W FSH3Q99369 266 aa2.89□□□□□ -1.95
UBP8YMR223W HTB1P02293 131 aaKnown RBP2.88□□□□□ -1.95
UBP8YMR223W HTB2P02294 131 aa2.88□□□□□ -1.95
UBP8YMR223W SCEIP03882 235 aa2.88□□□□□ -1.95
UBP8YMR223W RPS3P05750 240 aaKnown RBP2.88□□□□□ -1.95
UBP8YMR223W MAS2P11914 482 aa2.88□□□□□ -1.95
UBP8YMR223W YMR31P19955 123 aa2.88□□□□□ -1.95
UBP8YMR223W DAL82P21705 255 aa2.88□□□□□ -1.95
UBP8YMR223W MSK1P32048 576 aa2.88□□□□□ -1.95
UBP8YMR223W CBP4P37267 147 aa2.88□□□□□ -1.95
UBP8YMR223W INM1P38710 295 aa2.88□□□□□ -1.95
UBP8YMR223W CCT2P39076 527 aaKnown RBP2.88□□□□□ -1.95
UBP8YMR223W PAC11P40960 533 aa2.88□□□□□ -1.95
UBP8YMR223W PHO86P46956 311 aa2.88□□□□□ -1.95
UBP8YMR223W LSM1P47017 172 aaKnown RBP2.88□□□□□ -1.95
UBP8YMR223W SSN8P47821 323 aa2.88□□□□□ -1.95
UBP8YMR223W YGR168CP53293 376 aa2.88□□□□□ -1.95
UBP8YMR223W BIO4P53630 237 aa2.88□□□□□ -1.95
UBP8YMR223W EBS1Q03466 884 aaKnown RBP2.88□□□□□ -1.95
UBP8YMR223W SMP3Q04174 516 aa2.88□□□□□ -1.95
UBP8YMR223W AI5_BETAQ9ZZX0 354 aa2.88□□□□□ -1.95
UBP8YMR223W YAR066WP0CX18 203 aa2.87□□□□□ -1.95
UBP8YMR223W YHR214WP0CX19 203 aa2.87□□□□□ -1.95
UBP8YMR223W POX1P13711 748 aa2.87□□□□□ -1.95
UBP8YMR223W HPR1P17629 752 aaKnown RBP2.87□□□□□ -1.95
UBP8YMR223W VPS1P21576 704 aaKnown RBP2.87□□□□□ -1.95
UBP8YMR223W RFA3P26755 122 aaKnown RBP2.87□□□□□ -1.95
UBP8YMR223W FIG1P38224 298 aa2.87□□□□□ -1.95
UBP8YMR223W FES1P38260 290 aa2.87□□□□□ -1.95
UBP8YMR223W BMT2P38278 337 aa2.87□□□□□ -1.95
UBP8YMR223W HIS2P38635 335 aa2.87□□□□□ -1.95
UBP8YMR223W PCF11P39081 626 aaPredicted RBP2.87□□□□□ -1.95
UBP8YMR223W SYG1P40528 902 aa2.87□□□□□ -1.95
UBP8YMR223W YPS6P40583 537 aa2.87□□□□□ -1.95
UBP8YMR223W SAS2P40963 338 aa2.87□□□□□ -1.95
UBP8YMR223W POP1P41812 875 aa2.87□□□□□ -1.95
UBP8YMR223W AGP3P43548 558 aa2.87□□□□□ -1.95
UBP8YMR223W RPC17P47076 161 aa2.87□□□□□ -1.95
UBP8YMR223W PXR1P53335 271 aaPredicted RBP2.87□□□□□ -1.95
UBP8YMR223W MRPL50P53724 139 aa2.87□□□□□ -1.95
UBP8YMR223W MMT1Q03218 510 aa2.87□□□□□ -1.95
UBP8YMR223W OST6Q03723 332 aa2.87□□□□□ -1.95
UBP8YMR223W YDL114WQ07530 308 aa2.87□□□□□ -1.95
UBP8YMR223W SHS1Q07657 551 aa2.87□□□□□ -1.95
UBP8YMR223W SLF1Q12034 447 aaKnown RBP2.87□□□□□ -1.95
UBP8YMR223W RUP1Q12242 671 aa2.87□□□□□ -1.95
UBP8YMR223W YBR121C-AP0C5L4 52 aa2.86□□□□□ -1.95
UBP8YMR223W ASP3-2P0CX77 362 aa2.86□□□□□ -1.95
UBP8YMR223W ASP3-3P0CX78 362 aa2.86□□□□□ -1.95
UBP8YMR223W ASP3-4P0CX79 362 aa2.86□□□□□ -1.95
UBP8YMR223W ASP3-1P0CZ17 362 aa2.86□□□□□ -1.95
UBP8YMR223W SNA3P14359 133 aa2.86□□□□□ -1.95
UBP8YMR223W MXR2P25566 168 aa2.86□□□□□ -1.95
UBP8YMR223W POP5P28005 173 aa2.86□□□□□ -1.95
UBP8YMR223W PRP21P32524 280 aaPredicted RBP2.86□□□□□ -1.95
UBP8YMR223W CYS4P32582 507 aaKnown RBP2.86□□□□□ -1.95
UBP8YMR223W IES6P32617 166 aa2.86□□□□□ -1.95
UBP8YMR223W MNS1P32906 549 aa2.86□□□□□ -1.95
UBP8YMR223W YKL097CP34245 136 aa2.86□□□□□ -1.95
UBP8YMR223W BTT1P40314 149 aaPredicted RBP2.86□□□□□ -1.95
UBP8YMR223W POG1P40473 351 aa2.86□□□□□ -1.95
UBP8YMR223W OST1P41543 476 aaKnown RBP2.86□□□□□ -1.95
UBP8YMR223W YJR056CP47115 236 aa2.86□□□□□ -1.95
UBP8YMR223W TOS2P50078 622 aa2.86□□□□□ -1.95
UBP8YMR223W NIF3P53081 288 aa2.86□□□□□ -1.95
UBP8YMR223W ALG11P53954 548 aaKnown RBP2.86□□□□□ -1.95
UBP8YMR223W CDC14Q00684 551 aa2.86□□□□□ -1.95
UBP8YMR223W PRP38Q00723 242 aaPredicted RBP2.86□□□□□ -1.95
UBP8YMR223W YPR147CQ06522 304 aaKnown RBP2.86□□□□□ -1.95
UBP8YMR223W SIA1Q12212 622 aa2.86□□□□□ -1.95
UBP8YMR223W FAB1P34756 2278 aa2.86□□□□□ -1.95
UBP8YMR223W IMA3P0CW40 589 aa2.85□□□□□ -1.95
UBP8YMR223W IMA4P0CW41 589 aa2.85□□□□□ -1.95
UBP8YMR223W RPL12AP0CX53 165 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W RPL12BP0CX54 165 aa2.85□□□□□ -1.95
UBP8YMR223W RBK1P25332 333 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms