RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YKL063CP35725 167 aa4.4□□□□□ -1.71
YIR043CYIR043C IGD1P43598 195 aa4.4□□□□□ -1.71
YIR043CYIR043C SWC4P53201 476 aa4.4□□□□□ -1.71
YIR043CYIR043C YGR015CP53208 328 aa4.4□□□□□ -1.71
YIR043CYIR043C NRM1P53718 249 aa4.4□□□□□ -1.71
YIR043CYIR043C RNH201P53942 307 aa4.4□□□□□ -1.71
YIR043CYIR043C YDR115WQ04598 105 aa4.4□□□□□ -1.71
YIR043CYIR043C GPN3Q06543 272 aa4.4□□□□□ -1.71
YIR043CYIR043C POM33Q12164 279 aa4.4□□□□□ -1.71
YIR043CYIR043C PRM4Q12498 284 aa4.4□□□□□ -1.71
YIR043CYIR043C ATP6P00854 259 aa4.39□□□□□ -1.71
YIR043CYIR043C SKG6P32900 734 aaPredicted RBP4.39□□□□□ -1.71
YIR043CYIR043C CHL4P38907 458 aa4.39□□□□□ -1.71
YIR043CYIR043C SOP4P39543 234 aaPredicted RBP4.39□□□□□ -1.71
YIR043CYIR043C STB1P42845 420 aa4.39□□□□□ -1.71
YIR043CYIR043C TPC1P53257 314 aa4.39□□□□□ -1.71
YIR043CYIR043C YPL077CQ02831 240 aa4.39□□□□□ -1.71
YIR043CYIR043C SCS7Q03529 384 aa4.39□□□□□ -1.71
YIR043CYIR043C PAL1Q05518 499 aaKnown RBP4.39□□□□□ -1.71
YIR043CYIR043C DTD1Q07648 150 aaKnown RBP4.39□□□□□ -1.71
YIR043CYIR043C YOR376WQ08900 122 aa4.39□□□□□ -1.71
YIR043CYIR043C SSK22P25390 1331 aaPredicted RBP4.39□□□□□ -1.71
YIR043CYIR043C RSR1P13856 272 aa4.38□□□□□ -1.71
YIR043CYIR043C HPR1P17629 752 aaKnown RBP4.38□□□□□ -1.71
YIR043CYIR043C IES6P32617 166 aa4.38□□□□□ -1.71
YIR043CYIR043C MCH2P36032 473 aa4.38□□□□□ -1.71
YIR043CYIR043C BMT2P38278 337 aa4.38□□□□□ -1.71
YIR043CYIR043C YPC1P38298 316 aa4.38□□□□□ -1.71
YIR043CYIR043C YJL118WP47022 219 aa4.38□□□□□ -1.71
YIR043CYIR043C FAR10Q06001 478 aa4.38□□□□□ -1.71
YIR043CYIR043C RSA1Q08932 381 aa4.38□□□□□ -1.71
YIR043CYIR043C RRP42Q12277 265 aaPredicted RBP4.38□□□□□ -1.71
YIR043CYIR043C TDH3P00359 332 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
YIR043CYIR043C YEL045CP32616 141 aa4.37□□□□□ -1.71
YIR043CYIR043C GCG1P32656 232 aaKnown RBP4.37□□□□□ -1.71
YIR043CYIR043C RPC37P36121 282 aa4.37□□□□□ -1.71
YIR043CYIR043C SHE1P38200 338 aa4.37□□□□□ -1.71
YIR043CYIR043C PET8P38921 284 aa4.37□□□□□ -1.71
YIR043CYIR043C SHQ1P40486 507 aaPredicted RBP4.37□□□□□ -1.71
YIR043CYIR043C YIA6P40556 373 aa4.37□□□□□ -1.71
YIR043CYIR043C GMC2Q06201 188 aa4.37□□□□□ -1.71
YIR043CYIR043C BTS1Q12051 335 aa4.37□□□□□ -1.71
YIR043CYIR043C ILV1P00927 576 aaKnown RBP4.36□□□□□ -1.71
YIR043CYIR043C BGL2P15703 313 aaKnown RBP4.36□□□□□ -1.71
YIR043CYIR043C MRPL20P22354 195 aaPredicted RBP4.36□□□□□ -1.71
YIR043CYIR043C COY1P34237 679 aa4.36□□□□□ -1.71
YIR043CYIR043C RCK1P38622 512 aa4.36□□□□□ -1.71
YIR043CYIR043C GDS1P41913 522 aa4.36□□□□□ -1.71
YIR043CYIR043C UBC13P52490 153 aa4.36□□□□□ -1.71
YIR043CYIR043C MRX11Q03079 207 aa4.36□□□□□ -1.71
YIR043CYIR043C COX20Q04935 205 aa4.36□□□□□ -1.71
YIR043CYIR043C RPN8Q08723 338 aaKnown RBP4.36□□□□□ -1.71
YIR043CYIR043C TFC7Q12415 435 aa4.36□□□□□ -1.71
YIR043CYIR043C VPS1P21576 704 aaKnown RBP4.35□□□□□ -1.71
YIR043CYIR043C CBF5P33322 483 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
YIR043CYIR043C SPT8P38915 602 aa4.35□□□□□ -1.71
YIR043CYIR043C AGX1P43567 385 aa4.35□□□□□ -1.71
YIR043CYIR043C HIT1P46973 164 aa4.35□□□□□ -1.71
YIR043CYIR043C NUP84P52891 726 aa4.35□□□□□ -1.71
YIR043CYIR043C KAP114P53067 1004 aa4.35□□□□□ -1.71
YIR043CYIR043C SHE10P53075 577 aa4.35□□□□□ -1.71
YIR043CYIR043C SRO7Q12038 1033 aa4.35□□□□□ -1.71
YIR043CYIR043C YPR064WQ12492 139 aa4.35□□□□□ -1.71
YIR043CYIR043C IMP3P32899 183 aaPredicted RBP4.34□□□□□ -1.71
YIR043CYIR043C SDT1P53078 280 aa4.34□□□□□ -1.71
YIR043CYIR043C VHT1P53241 593 aa4.34□□□□□ -1.71
YIR043CYIR043C LSB1P53281 241 aa4.34□□□□□ -1.71
YIR043CYIR043C CPD1P53314 239 aa4.34□□□□□ -1.71
YIR043CYIR043C RMI1Q02685 241 aa4.34□□□□□ -1.71
YIR043CYIR043C YLR446WQ06204 433 aa4.34□□□□□ -1.71
YIR043CYIR043C YLR173WQ06247 608 aa4.34□□□□□ -1.71
YIR043CYIR043C MMT2Q08970 484 aa4.34□□□□□ -1.71
YIR043CYIR043C BI3Q9ZZW7 517 aa4.34□□□□□ -1.71
YIR043CYIR043C COX4P04037 155 aa4.33□□□□□ -1.72
YIR043CYIR043C POL30P15873 258 aaKnown RBP4.33□□□□□ -1.72
YIR043CYIR043C GPI18P38211 433 aa4.33□□□□□ -1.72
YIR043CYIR043C YNL134CP53912 376 aaKnown RBP4.33□□□□□ -1.72
YIR043CYIR043C ADD37Q03233 198 aa4.33□□□□□ -1.72
YIR043CYIR043C GMC1Q04399 608 aa4.33□□□□□ -1.72
YIR043CYIR043C SCW10Q04951 389 aa4.33□□□□□ -1.72
YIR043CYIR043C TAZ1Q06510 381 aa4.33□□□□□ -1.72
YIR043CYIR043C MIM1Q08176 113 aa4.33□□□□□ -1.72
YIR043CYIR043C TY3A-GQ12173 290 aa4.33□□□□□ -1.72
YIR043CYIR043C FOL3Q12676 427 aaPredicted RBP4.33□□□□□ -1.72
YIR043CYIR043C TY3A-IQ99219 290 aa4.33□□□□□ -1.72
YIR043CYIR043C ASP3-2P0CX77 362 aa4.32□□□□□ -1.72
YIR043CYIR043C ASP3-3P0CX78 362 aa4.32□□□□□ -1.72
YIR043CYIR043C ASP3-4P0CX79 362 aa4.32□□□□□ -1.72
YIR043CYIR043C ASP3-1P0CZ17 362 aa4.32□□□□□ -1.72
YIR043CYIR043C TFS1P14306 219 aa4.32□□□□□ -1.72
YIR043CYIR043C MET16P18408 261 aaPredicted RBP4.32□□□□□ -1.72
YIR043CYIR043C SPT4P32914 102 aaPredicted RBP4.32□□□□□ -1.72
YIR043CYIR043C PRM9P39551 298 aa4.32□□□□□ -1.72
YIR043CYIR043C RPL21AQ02753 160 aaKnown RBP4.32□□□□□ -1.72
YIR043CYIR043C YMR209CQ03648 457 aa4.32□□□□□ -1.72
YIR043CYIR043C CTS2Q06350 511 aa4.32□□□□□ -1.72
YIR043CYIR043C TMC1Q08422 150 aaPredicted RBP4.32□□□□□ -1.72
YIR043CYIR043C YPL245WQ12179 454 aaKnown RBP4.32□□□□□ -1.72
YIR043CYIR043C LAG2Q92325 660 aa4.32□□□□□ -1.72
YIR043CYIR043C COX2P00410 251 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms