RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W VPS73P53142 486 aaKnown RBP12.56□□□□□ -0.4
RPN10YHR200W BUD9P53226 547 aa12.56□□□□□ -0.4
RPN10YHR200W RRN9P53437 365 aa12.56□□□□□ -0.4
RPN10YHR200W FDC1Q03034 503 aa12.56□□□□□ -0.4
RPN10YHR200W RKM1Q08961 583 aaPredicted RBP12.56□□□□□ -0.4
RPN10YHR200W THP3Q12049 470 aaKnown RBP12.56□□□□□ -0.4
RPN10YHR200W YOL114CQ12322 202 aa12.56□□□□□ -0.4
RPN10YHR200W AHC2P25649 128 aa12.55□□□□□ -0.4
RPN10YHR200W PUB1P32588 453 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
RPN10YHR200W DTR1P38125 572 aa12.55□□□□□ -0.4
RPN10YHR200W RPP1P38786 293 aa12.55□□□□□ -0.4
RPN10YHR200W SDP1P40479 209 aa12.55□□□□□ -0.4
RPN10YHR200W POP1P41812 875 aa12.55□□□□□ -0.4
RPN10YHR200W PDR16P53860 351 aaKnown RBP12.55□□□□□ -0.4
RPN10YHR200W MED2Q12124 431 aa12.55□□□□□ -0.4
RPN10YHR200W DCP1Q12517 231 aaPredicted RBP12.55□□□□□ -0.4
RPN10YHR200W FAS1P07149 2051 aaKnown RBP12.55□□□□□ -0.4
RPN10YHR200W MDH3P32419 343 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
RPN10YHR200W SDS22P36047 338 aa12.54□□□□□ -0.4
RPN10YHR200W MAL32P38158 584 aa12.54□□□□□ -0.4
RPN10YHR200W MAL12P53341 584 aa12.54□□□□□ -0.4
RPN10YHR200W NUP116Q02630 1113 aa12.54□□□□□ -0.4
RPN10YHR200W RDR1Q08904 546 aa12.54□□□□□ -0.4
RPN10YHR200W HFA1P32874 2273 aa12.53□□□□□ -0.4
RPN10YHR200W YHR214C-DP0CX93 97 aa12.53□□□□□ -0.4
RPN10YHR200W ERG8P24521 451 aa12.53□□□□□ -0.4
RPN10YHR200W YCR102CP25608 368 aa12.53□□□□□ -0.4
RPN10YHR200W ARO7P32178 256 aa12.53□□□□□ -0.4
RPN10YHR200W NUD1P32336 851 aa12.53□□□□□ -0.4
RPN10YHR200W GPX2P38143 162 aa12.53□□□□□ -0.4
RPN10YHR200W YFR054CP43622 192 aa12.53□□□□□ -0.4
RPN10YHR200W COX20Q04935 205 aa12.53□□□□□ -0.4
RPN10YHR200W DFG5Q05031 458 aa12.53□□□□□ -0.4
RPN10YHR200W MRPL51Q06090 140 aaPredicted RBP12.53□□□□□ -0.4
RPN10YHR200W RAX1Q08760 435 aa12.53□□□□□ -0.4
RPN10YHR200W BTS1Q12051 335 aa12.53□□□□□ -0.4
RPN10YHR200W ACF2Q12168 779 aa12.53□□□□□ -0.4
RPN10YHR200W CDC31P06704 161 aaKnown RBP12.52□□□□□ -0.41
RPN10YHR200W FUN19P28003 413 aaPredicted RBP12.52□□□□□ -0.41
RPN10YHR200W NPL6P32832 435 aa12.52□□□□□ -0.41
RPN10YHR200W RSM22P36056 628 aa12.52□□□□□ -0.41
RPN10YHR200W YER010CP40011 234 aa12.52□□□□□ -0.41
RPN10YHR200W YIL165CP40446 119 aa12.52□□□□□ -0.41
RPN10YHR200W VOA1P53262 265 aa12.52□□□□□ -0.41
RPN10YHR200W PAU12P53343 120 aa12.52□□□□□ -0.41
RPN10YHR200W TDA1Q03533 586 aa12.52□□□□□ -0.41
RPN10YHR200W SNX41Q04053 625 aa12.52□□□□□ -0.41
RPN10YHR200W TAZ1Q06510 381 aa12.52□□□□□ -0.41
RPN10YHR200W YOL024WQ08172 172 aa12.52□□□□□ -0.41
RPN10YHR200W RRG7Q08774 242 aaPredicted RBP12.52□□□□□ -0.41
RPN10YHR200W SEC62P21825 274 aa12.51□□□□□ -0.41
RPN10YHR200W YCL002CP25565 263 aa12.51□□□□□ -0.41
RPN10YHR200W PAD1P33751 242 aaKnown RBP RIP-Chip data12.51□□□□□ -0.41not detected
RPN10YHR200W AMN1P38285 549 aaPredicted RBP12.51□□□□□ -0.41
RPN10YHR200W GRE3P38715 327 aaKnown RBP RIP-Chip data12.51□□□□□ -0.41not detected
RPN10YHR200W GDS1P41913 522 aa12.51□□□□□ -0.41
RPN10YHR200W MKC7P53379 596 aa12.51□□□□□ -0.41
RPN10YHR200W APM1Q00776 475 aaPredicted RBP12.51□□□□□ -0.41
RPN10YHR200W YPL039WQ03080 316 aa12.51□□□□□ -0.41
RPN10YHR200W GPN3Q06543 272 aa12.51□□□□□ -0.41
RPN10YHR200W YDL176WQ12027 708 aa12.51□□□□□ -0.41
RPN10YHR200W TY1A-NL1Q12391 440 aaKnown RBP12.51□□□□□ -0.41
RPN10YHR200W SFG1Q12507 346 aa12.51□□□□□ -0.41
RPN10YHR200W MTR10Q99189 972 aa12.51□□□□□ -0.41
RPN10YHR200W PRE7P23724 241 aaKnown RBP12.5□□□□□ -0.41
RPN10YHR200W CPR3P25719 182 aa12.5□□□□□ -0.41
RPN10YHR200W NAM9P27929 486 aa12.5□□□□□ -0.41
RPN10YHR200W SER3P40054 469 aa12.5□□□□□ -0.41
RPN10YHR200W PGU1P47180 361 aa12.5□□□□□ -0.41
RPN10YHR200W CPR8P53728 308 aa12.5□□□□□ -0.41
RPN10YHR200W ATG21Q02887 496 aa12.5□□□□□ -0.41
RPN10YHR200W AIM6Q07716 390 aa12.5□□□□□ -0.41
RPN10YHR200W HRT1Q08273 121 aa12.5□□□□□ -0.41
RPN10YHR200W FRE6Q12473 712 aa12.5□□□□□ -0.41
RPN10YHR200W YEL009C-AA0A023PZF2 135 aa12.49□□□□□ -0.41
RPN10YHR200W QCR7P00128 127 aa12.49□□□□□ -0.41
RPN10YHR200W KIN28P06242 306 aa12.49□□□□□ -0.41
RPN10YHR200W HMG1P12683 1054 aa12.49□□□□□ -0.41
RPN10YHR200W PDX1P16451 410 aa12.49□□□□□ -0.41
RPN10YHR200W GAS1P22146 559 aaKnown RBP12.49□□□□□ -0.41
RPN10YHR200W STE50P25344 346 aa12.49□□□□□ -0.41
RPN10YHR200W VPS17P32913 551 aa12.49□□□□□ -0.41
RPN10YHR200W FCY21P40039 528 aa12.49□□□□□ -0.41
RPN10YHR200W YNL208WP40159 199 aaKnown RBP12.49□□□□□ -0.41
RPN10YHR200W YJL218WP40892 196 aaKnown RBP12.49□□□□□ -0.41
RPN10YHR200W HOL1P53389 586 aa12.49□□□□□ -0.41
RPN10YHR200W LUC7Q07508 261 aaPredicted RBP12.49□□□□□ -0.41
RPN10YHR200W FRE5Q08908 694 aa12.49□□□□□ -0.41
RPN10YHR200W BAG7Q12128 409 aa12.49□□□□□ -0.41
RPN10YHR200W YRA1Q12159 226 aaKnown RBP12.49□□□□□ -0.41
RPN10YHR200W YPR1Q12458 312 aa12.49□□□□□ -0.41
RPN10YHR200W YOR343CQ12484 108 aa12.49□□□□□ -0.41
RPN10YHR200W SUS1Q6WNK7 96 aa12.49□□□□□ -0.41
RPN10YHR200W YBL113CQ7M4S9 792 aa12.49□□□□□ -0.41
RPN10YHR200W RPN13O13563 156 aa12.48□□□□□ -0.41
RPN10YHR200W RPB8P20436 146 aa12.48□□□□□ -0.41
RPN10YHR200W EXG1P23776 448 aaKnown RBP12.48□□□□□ -0.41
RPN10YHR200W FUN26P31381 517 aa12.48□□□□□ -0.41
RPN10YHR200W OM14P38325 134 aa12.48□□□□□ -0.41
RPN10YHR200W REE1P40893 198 aa12.48□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms