RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A YFL040WP43562 540 aa2.11□□□□□ -2.07
YGR109W-AYGR109W-A PRO2P54885 456 aaKnown RBP2.11□□□□□ -2.07
YGR109W-AYGR109W-A MRX9Q07349 420 aaKnown RBP2.11□□□□□ -2.07
YGR109W-AYGR109W-A DFM1Q12743 341 aaKnown RBP2.11□□□□□ -2.07
YGR109W-AYGR109W-A MRPL20P22354 195 aaPredicted RBP2.1□□□□□ -2.07
YGR109W-AYGR109W-A RBK1P25332 333 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A ITR2P30606 609 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A SRB2P34162 210 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A COS4P43542 379 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A SDS23P53172 527 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A RVB1Q03940 463 aaKnown RBP2.1□□□□□ -2.07
YGR109W-AYGR109W-A YMR111CQ04461 462 aaPredicted RBP2.1□□□□□ -2.07
YGR109W-AYGR109W-A APC4Q04601 652 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A HRT1Q08273 121 aa2.1□□□□□ -2.07
YGR109W-AYGR109W-A VMA2P16140 517 aaKnown RBP2.09□□□□□ -2.07
YGR109W-AYGR109W-A CPT1P17898 393 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A CKA2P19454 339 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A ACB1P31787 87 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A YIL059CP40520 121 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A VPS20Q04272 221 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A YLR012CQ07927 99 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A PAA1Q12447 191 aaKnown RBP2.09□□□□□ -2.07
YGR109W-AYGR109W-A PRM4Q12498 284 aa2.09□□□□□ -2.07
YGR109W-AYGR109W-A SUR1P33300 382 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A BUD2P33314 1104 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A YKL187CP34231 750 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A FET3P38993 636 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A MPP10P47083 593 aaKnown RBP2.08□□□□□ -2.08
YGR109W-AYGR109W-A SMD1Q02260 146 aaPredicted RBP2.08□□□□□ -2.08
YGR109W-AYGR109W-A YPL080CQ02826 108 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A CAB5Q03941 241 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A DIB1Q06819 143 aaPredicted RBP2.08□□□□□ -2.08
YGR109W-AYGR109W-A REX3Q12090 404 aa2.08□□□□□ -2.08
YGR109W-AYGR109W-A CDC37P06101 506 aaKnown RBP2.07□□□□□ -2.08
YGR109W-AYGR109W-A ERD1P16151 362 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A YBR062CP38239 180 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A SWC5P38326 303 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A END3P39013 349 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A UTP25P40498 721 aaKnown RBP2.07□□□□□ -2.08
YGR109W-AYGR109W-A INA22P40576 216 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A YJL144WP47009 104 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A YGL118CP53132 145 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A CAX4P53223 239 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A YNR066CP53752 436 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A IRC4Q03036 179 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A UBX2Q04228 584 aa2.07□□□□□ -2.08
YGR109W-AYGR109W-A SAM4Q08985 325 aaKnown RBP2.07□□□□□ -2.08
YGR109W-AYGR109W-A CUP2P15315 225 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A KRR1P25586 316 aaPredicted RBP2.06□□□□□ -2.08
YGR109W-AYGR109W-A ZRT1P32804 376 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A POP2P39008 433 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A SOP4P39543 234 aaPredicted RBP2.06□□□□□ -2.08
YGR109W-AYGR109W-A OSW5P40219 148 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A ASG7P46993 209 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A SNX41Q04053 625 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A GMC1Q04399 608 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A PBP4Q07362 185 aaKnown RBP2.06□□□□□ -2.08
YGR109W-AYGR109W-A DTD1Q07648 150 aaKnown RBP2.06□□□□□ -2.08
YGR109W-AYGR109W-A YOR292CQ08743 309 aa2.06□□□□□ -2.08
YGR109W-AYGR109W-A YPR096CO13587 100 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A CBP2P03874 630 aaPredicted RBP2.05□□□□□ -2.08
YGR109W-AYGR109W-A YPC1P38298 316 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A CTM1P38818 585 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A SSO2P39926 295 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A SLM1P40485 686 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A YIL054WP40524 105 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A MIC19P43594 170 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A RIB4P50861 169 aaPredicted RBP2.05□□□□□ -2.08
YGR109W-AYGR109W-A DBP6P53734 629 aaKnown RBP2.05□□□□□ -2.08
YGR109W-AYGR109W-A ACT1P60010 375 aaKnown RBP2.05□□□□□ -2.08
YGR109W-AYGR109W-A VTI1Q04338 217 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A CUR1Q06469 252 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A TRM10Q12400 293 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A TFC7Q12415 435 aa2.05□□□□□ -2.08
YGR109W-AYGR109W-A PRP46Q12417 451 aaPredicted RBP2.05□□□□□ -2.08
YGR109W-AYGR109W-A STF1P01098 86 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A RPS23AP0CX29 145 aaKnown RBP2.04□□□□□ -2.08
YGR109W-AYGR109W-A RPS23BP0CX30 145 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A GPX1P36014 167 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A YHR035WP38769 630 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A YDR089WP38966 869 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A OKP1P53298 406 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A GTO3Q04806 366 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A YLR297WQ05899 129 aa2.04□□□□□ -2.08
YGR109W-AYGR109W-A RTC5Q12108 567 aaKnown RBP2.04□□□□□ -2.08
YGR109W-AYGR109W-A YPL245WQ12179 454 aaKnown RBP2.04□□□□□ -2.08
YGR109W-AYGR109W-A CAR2P07991 424 aaKnown RBP2.03□□□□□ -2.08
YGR109W-AYGR109W-A MSS116P15424 664 aaKnown RBP2.03□□□□□ -2.08
YGR109W-AYGR109W-A PET18P25362 215 aa2.03□□□□□ -2.08
YGR109W-AYGR109W-A INO2P26798 304 aa2.03□□□□□ -2.08
YGR109W-AYGR109W-A MCH2P36032 473 aa2.03□□□□□ -2.08
YGR109W-AYGR109W-A ASP1P38986 381 aaPredicted RBP2.03□□□□□ -2.08
YGR109W-AYGR109W-A MGR3Q04472 501 aa2.03□□□□□ -2.08
YGR109W-AYGR109W-A SEC13Q04491 297 aaKnown RBP2.03□□□□□ -2.08
YGR109W-AYGR109W-A YPL264CQ08980 353 aa2.03□□□□□ -2.08
YGR109W-AYGR109W-A UTP23Q12339 254 aaKnown RBP2.03□□□□□ -2.08
YGR109W-AYGR109W-A YPR1Q12458 312 aa2.03□□□□□ -2.08
YGR109W-AYGR109W-A PFK27Q12471 397 aaPredicted RBP2.03□□□□□ -2.08
YGR109W-AYGR109W-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
YGR109W-AYGR109W-A CDC42P19073 191 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms