RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	UBX2	Q04228	584 aa		2.71	□□□□□ -1.98
LSM4	YER112W	VTI1	Q04338	217 aa		2.71	□□□□□ -1.98
LSM4	YER112W	YPR1	Q12458	312 aa		2.71	□□□□□ -1.98
LSM4	YER112W	SAL1	D6W196	494 aa		2.7	□□□□□ -1.98
LSM4	YER112W	SPS100	P13130	326 aa		2.7	□□□□□ -1.98
LSM4	YER112W	MSS116	P15424	664 aa	Known RBP	2.7	□□□□□ -1.98
LSM4	YER112W	ERD1	P16151	362 aa		2.7	□□□□□ -1.98
LSM4	YER112W	FMT1	P32785	401 aa		2.7	□□□□□ -1.98
LSM4	YER112W	CYM1	P32898	989 aa		2.7	□□□□□ -1.98
LSM4	YER112W	SKG6	P32900	734 aa	Predicted RBP	2.7	□□□□□ -1.98
LSM4	YER112W	FRM2	P37261	193 aa		2.7	□□□□□ -1.98
LSM4	YER112W	RCK1	P38622	512 aa		2.7	□□□□□ -1.98
LSM4	YER112W	YHR035W	P38769	630 aa		2.7	□□□□□ -1.98
LSM4	YER112W	LOH1	P47055	219 aa		2.7	□□□□□ -1.98
LSM4	YER112W	HST4	P53688	370 aa		2.7	□□□□□ -1.98
LSM4	YER112W	PRO2	P54885	456 aa	Known RBP	2.7	□□□□□ -1.98
LSM4	YER112W	YPL080C	Q02826	108 aa		2.7	□□□□□ -1.98
LSM4	YER112W	INP2	Q03824	705 aa		2.7	□□□□□ -1.98
LSM4	YER112W	SAM4	Q08985	325 aa	Known RBP	2.7	□□□□□ -1.98
LSM4	YER112W	ZRT1	P32804	376 aa		2.69	□□□□□ -1.98
LSM4	YER112W	BDH1	P39714	382 aa		2.69	□□□□□ -1.98
LSM4	YER112W	RRG9	P40156	214 aa		2.69	□□□□□ -1.98
LSM4	YER112W	PFS2	P42841	465 aa	Known RBP	2.69	□□□□□ -1.98
LSM4	YER112W	FMP48	P53233	369 aa		2.69	□□□□□ -1.98
LSM4	YER112W	OKP1	P53298	406 aa		2.69	□□□□□ -1.98
LSM4	YER112W	VIK1	Q12045	647 aa		2.69	□□□□□ -1.98
LSM4	YER112W	PRM7	Q12459	698 aa		2.69	□□□□□ -1.98
LSM4	YER112W	DFM1	Q12743	341 aa	Known RBP	2.69	□□□□□ -1.98
LSM4	YER112W	SAR1	P20606	190 aa	Known RBP	2.68	□□□□□ -1.98
LSM4	YER112W	MRPL20	P22354	195 aa	Predicted RBP	2.68	□□□□□ -1.98
LSM4	YER112W	OSW5	P40219	148 aa		2.68	□□□□□ -1.98
LSM4	YER112W	SLM1	P40485	686 aa		2.68	□□□□□ -1.98
LSM4	YER112W	VOA1	P53262	265 aa		2.68	□□□□□ -1.98
LSM4	YER112W	SNX41	Q04053	625 aa		2.68	□□□□□ -1.98
LSM4	YER112W	DIB1	Q06819	143 aa	Predicted RBP	2.68	□□□□□ -1.98
LSM4	YER112W	MDY2	Q12285	212 aa		2.68	□□□□□ -1.98
LSM4	YER112W	UTP23	Q12339	254 aa	Known RBP	2.68	□□□□□ -1.98
LSM4	YER112W	TRM10	Q12400	293 aa		2.68	□□□□□ -1.98
LSM4	YER112W	IFM1	P25038	676 aa		2.67	□□□□□ -1.98
LSM4	YER112W	RPL5	P26321	297 aa	Known RBP	2.67	□□□□□ -1.98
LSM4	YER112W	INO2	P26798	304 aa		2.67	□□□□□ -1.98
LSM4	YER112W	ZRT3	P34240	503 aa		2.67	□□□□□ -1.98
LSM4	YER112W	YKL162C	P36052	402 aa		2.67	□□□□□ -1.98
LSM4	YER112W	FET3	P38993	636 aa		2.67	□□□□□ -1.98
LSM4	YER112W	SOP4	P39543	234 aa	Predicted RBP	2.67	□□□□□ -1.98
LSM4	YER112W	PES4	P39684	611 aa		2.67	□□□□□ -1.98
LSM4	YER112W	YFL040W	P43562	540 aa		2.67	□□□□□ -1.98
LSM4	YER112W	COX16	P47081	118 aa		2.67	□□□□□ -1.98
LSM4	YER112W	YGR266W	P53326	701 aa		2.67	□□□□□ -1.98
LSM4	YER112W	YMR244W	Q04018	355 aa		2.67	□□□□□ -1.98
LSM4	YER112W	YDL211C	Q12121	372 aa		2.67	□□□□□ -1.98
LSM4	YER112W	TFC7	Q12415	435 aa		2.67	□□□□□ -1.98
LSM4	YER112W	IZH4	Q99393	312 aa		2.67	□□□□□ -1.98
LSM4	YER112W	CAR2	P07991	424 aa	Known RBP	2.66	□□□□□ -1.98
LSM4	YER112W	CUP2	P15315	225 aa		2.66	□□□□□ -1.98
LSM4	YER112W	COX10	P21592	462 aa		2.66	□□□□□ -1.98
LSM4	YER112W	AST1	P35183	429 aa		2.66	□□□□□ -1.98
LSM4	YER112W	MNN9	P39107	395 aa	Known RBP	2.66	□□□□□ -1.98
LSM4	YER112W	DSE1	P40077	573 aa		2.66	□□□□□ -1.98
LSM4	YER112W	RIB4	P50861	169 aa	Predicted RBP	2.66	□□□□□ -1.98
LSM4	YER112W	YGL118C	P53132	145 aa		2.66	□□□□□ -1.98
LSM4	YER112W	SWC4	P53201	476 aa		2.66	□□□□□ -1.98
LSM4	YER112W	DBP6	P53734	629 aa	Known RBP	2.66	□□□□□ -1.98
LSM4	YER112W	ZRG17	P53735	605 aa		2.66	□□□□□ -1.98
LSM4	YER112W	YNR066C	P53752	436 aa		2.66	□□□□□ -1.98
LSM4	YER112W	SMD1	Q02260	146 aa	Predicted RBP	2.66	□□□□□ -1.98
LSM4	YER112W	ABZ2	Q03266	374 aa		2.66	□□□□□ -1.98
LSM4	YER112W	ECM19	Q06011	112 aa		2.66	□□□□□ -1.98
LSM4	YER112W	RRG8	Q06109	277 aa		2.66	□□□□□ -1.98
LSM4	YER112W	MIM1	Q08176	113 aa		2.66	□□□□□ -1.98
LSM4	YER112W	PAA1	Q12447	191 aa	Known RBP	2.66	□□□□□ -1.98
LSM4	YER112W	LAG2	Q92325	660 aa		2.66	□□□□□ -1.98
LSM4	YER112W	BI3	Q9ZZW7	517 aa		2.66	□□□□□ -1.98
LSM4	YER112W	RAD7	P06779	565 aa		2.65	□□□□□ -1.99
LSM4	YER112W	CPT1	P17898	393 aa		2.65	□□□□□ -1.99
LSM4	YER112W	RPL16B	P26785	198 aa	Known RBP	2.65	□□□□□ -1.99
LSM4	YER112W	YMR262W	P38430	313 aa		2.65	□□□□□ -1.99
LSM4	YER112W	PET8	P38921	284 aa		2.65	□□□□□ -1.99
LSM4	YER112W	CDC40	P40968	455 aa	Predicted RBP	2.65	□□□□□ -1.99
LSM4	YER112W	CAX4	P53223	239 aa		2.65	□□□□□ -1.99
LSM4	YER112W	DCP1	Q12517	231 aa	Predicted RBP	2.65	□□□□□ -1.99
LSM4	YER112W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
LSM4	YER112W	CSE1	P33307	960 aa		2.64	□□□□□ -1.99
LSM4	YER112W	MCH2	P36032	473 aa		2.64	□□□□□ -1.99
LSM4	YER112W	LOC1	P43586	204 aa	Predicted RBP	2.64	□□□□□ -1.99
LSM4	YER112W	ASG7	P46993	209 aa		2.64	□□□□□ -1.99
LSM4	YER112W	ARP5	P53946	755 aa		2.64	□□□□□ -1.99
LSM4	YER112W	YPR195C	Q06594	109 aa		2.64	□□□□□ -1.99
LSM4	YER112W	VAC14	Q06708	880 aa		2.64	□□□□□ -1.99
LSM4	YER112W	PBP4	Q07362	185 aa	Known RBP	2.64	□□□□□ -1.99
LSM4	YER112W	APC9	Q12107	265 aa		2.64	□□□□□ -1.99
LSM4	YER112W	SIA1	Q12212	622 aa		2.64	□□□□□ -1.99
LSM4	YER112W	RRP42	Q12277	265 aa	Predicted RBP	2.64	□□□□□ -1.99
LSM4	YER112W	VPH2	P32341	215 aa		2.63	□□□□□ -1.99
LSM4	YER112W	RPC25	P35718	212 aa		2.63	□□□□□ -1.99
LSM4	YER112W	SWD2	P36104	329 aa	Predicted RBP	2.63	□□□□□ -1.99
LSM4	YER112W	ASP1	P38986	381 aa	Predicted RBP	2.63	□□□□□ -1.99
LSM4	YER112W	YIL059C	P40520	121 aa		2.63	□□□□□ -1.99
LSM4	YER112W	COS4	P43542	379 aa		2.63	□□□□□ -1.99
LSM4	YER112W	CSI1	Q04368	295 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms