RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C PHO2P07269 559 aa1.1□□□□□ -2.23
SEC3YER008C REV1P12689 985 aa1.1□□□□□ -2.23
SEC3YER008C YPK2P18961 677 aa1.1□□□□□ -2.23
SEC3YER008C PPA2P28239 310 aa1.1□□□□□ -2.23
SEC3YER008C GCG1P32656 232 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C ASK1P35734 292 aa1.1□□□□□ -2.23
SEC3YER008C ERG10P41338 398 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C YFL040WP43562 540 aa1.1□□□□□ -2.23
SEC3YER008C JHD2P47156 728 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C TRF5P48561 642 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C NIF3P53081 288 aa1.1□□□□□ -2.23
SEC3YER008C LST7P53237 242 aa1.1□□□□□ -2.23
SEC3YER008C GPI1P53306 609 aa1.1□□□□□ -2.23
SEC3YER008C GOR1P53839 350 aa1.1□□□□□ -2.23
SEC3YER008C RTC4P53850 401 aa1.1□□□□□ -2.23
SEC3YER008C EAF7P53911 425 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C RHO4Q00246 291 aa1.1□□□□□ -2.23
SEC3YER008C HER2Q03557 464 aa1.1□□□□□ -2.23
SEC3YER008C RRB1Q04225 511 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C FUS2Q05670 677 aa1.1□□□□□ -2.23
SEC3YER008C YOR376WQ08900 122 aa1.1□□□□□ -2.23
SEC3YER008C SAM4Q08985 325 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C NCA2Q12374 616 aa1.1□□□□□ -2.23
SEC3YER008C MAS2P11914 482 aa1.1□□□□□ -2.23
SEC3YER008C CAP2P13517 287 aa1.1□□□□□ -2.23
SEC3YER008C CPR1P14832 162 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C MTF1P14908 341 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C ADE1P27616 306 aa1.1□□□□□ -2.23
SEC3YER008C RIM2P38127 377 aa1.1□□□□□ -2.23
SEC3YER008C YMR262WP38430 313 aa1.1□□□□□ -2.23
SEC3YER008C BTT1P40314 149 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C SNM1P40993 198 aa1.1□□□□□ -2.23
SEC3YER008C SED5Q01590 340 aa1.1□□□□□ -2.23
SEC3YER008C CCE1Q03702 353 aa1.1□□□□□ -2.23
SEC3YER008C APC4Q04601 652 aa1.1□□□□□ -2.23
SEC3YER008C PAM18Q07914 168 aa1.1□□□□□ -2.23
SEC3YER008C SKI7Q08491 747 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C YDR034W-BQ6Q5X2 51 aa1.1□□□□□ -2.23
SEC3YER008C YCR025CP25352 136 aa1.09□□□□□ -2.23
SEC3YER008C YCR043CP25361 127 aa1.09□□□□□ -2.23
SEC3YER008C ERG9P29704 444 aa1.09□□□□□ -2.23
SEC3YER008C UTR4P32626 227 aa1.09□□□□□ -2.23
SEC3YER008C RAD5P32849 1169 aaPredicted RBP1.09□□□□□ -2.23
SEC3YER008C MRPL6P32904 214 aa1.09□□□□□ -2.23
SEC3YER008C YPT53P36019 220 aa1.09□□□□□ -2.23
SEC3YER008C IST2P38250 946 aa1.09□□□□□ -2.23
SEC3YER008C YHK8P38776 514 aa1.09□□□□□ -2.23
SEC3YER008C SPT8P38915 602 aa1.09□□□□□ -2.23
SEC3YER008C YAL037WP39728 267 aa1.09□□□□□ -2.23
SEC3YER008C LCP5P40079 357 aaPredicted RBP1.09□□□□□ -2.23
SEC3YER008C MRX5P47007 382 aa1.09□□□□□ -2.23
SEC3YER008C EAF6P47128 113 aa1.09□□□□□ -2.23
SEC3YER008C PEX31P53203 462 aa1.09□□□□□ -2.23
SEC3YER008C YML096WQ04489 525 aa1.09□□□□□ -2.23
SEC3YER008C SDO1Q07953 250 aaKnown RBP1.09□□□□□ -2.23
SEC3YER008C SRN2Q99176 213 aa1.09□□□□□ -2.23
SEC3YER008C POX1P13711 748 aa1.09□□□□□ -2.23
SEC3YER008C ZRC1P20107 442 aa1.09□□□□□ -2.23
SEC3YER008C YCR100CP25606 316 aa1.09□□□□□ -2.23
SEC3YER008C EHD3P28817 500 aa1.09□□□□□ -2.23
SEC3YER008C AGA1P32323 725 aa1.09□□□□□ -2.23
SEC3YER008C YBR096WP38256 230 aa1.09□□□□□ -2.23
SEC3YER008C HIS2P38635 335 aa1.09□□□□□ -2.23
SEC3YER008C SMB1P40018 196 aaKnown RBP1.09□□□□□ -2.23
SEC3YER008C SHO1P40073 367 aa1.09□□□□□ -2.23
SEC3YER008C HOP2P53187 214 aa1.09□□□□□ -2.23
SEC3YER008C VBA1Q04301 562 aa1.09□□□□□ -2.23
SEC3YER008C YPL199CQ08954 240 aa1.09□□□□□ -2.23
SEC3YER008C SRL2Q12020 392 aa1.09□□□□□ -2.23
SEC3YER008C DAP1Q12091 152 aa1.09□□□□□ -2.23
SEC3YER008C MED2Q12124 431 aa1.09□□□□□ -2.23
SEC3YER008C RPN6Q12377 434 aa1.09□□□□□ -2.23
SEC3YER008C YKL183C-AQ3E765 70 aa1.09□□□□□ -2.23
SEC3YER008C AMD1P15274 810 aaKnown RBP1.09□□□□□ -2.24
SEC3YER008C COQ1P18900 473 aa1.09□□□□□ -2.24
SEC3YER008C VPS1P21576 704 aaKnown RBP1.09□□□□□ -2.24
SEC3YER008C PBN1P25580 416 aa1.09□□□□□ -2.24
SEC3YER008C PMT2P31382 759 aa1.09□□□□□ -2.24
SEC3YER008C SRB4P32569 687 aa1.09□□□□□ -2.24
SEC3YER008C LOS1P33418 1100 aaPredicted RBP1.09□□□□□ -2.24
SEC3YER008C MRPL10P36520 322 aa1.09□□□□□ -2.24
SEC3YER008C SLX1P38324 304 aa1.09□□□□□ -2.24
SEC3YER008C URA8P38627 578 aaPredicted RBP1.09□□□□□ -2.24
SEC3YER008C GEP4P38812 185 aa1.09□□□□□ -2.24
SEC3YER008C LYS1P38998 373 aaRIP-Chip data1.09□□□□□ -2.24not detected
SEC3YER008C UTP25P40498 721 aaKnown RBP1.09□□□□□ -2.24
SEC3YER008C YKE4P40544 346 aa1.09□□□□□ -2.24
SEC3YER008C TES1P41903 349 aaKnown RBP1.09□□□□□ -2.24
SEC3YER008C GDS1P41913 522 aa1.09□□□□□ -2.24
SEC3YER008C AGP3P43548 558 aa1.09□□□□□ -2.24
SEC3YER008C MSO1P53604 210 aaKnown RBP1.09□□□□□ -2.24
SEC3YER008C YNL095CP53932 642 aa1.09□□□□□ -2.24
SEC3YER008C SRL4Q03085 281 aa1.09□□□□□ -2.24
SEC3YER008C CDC123Q05791 360 aa1.09□□□□□ -2.24
SEC3YER008C ASR1Q06834 288 aa1.09□□□□□ -2.24
SEC3YER008C HPR1P17629 752 aaKnown RBP1.08□□□□□ -2.24
SEC3YER008C YMR31P19955 123 aa1.08□□□□□ -2.24
SEC3YER008C SAR1P20606 190 aaKnown RBP1.08□□□□□ -2.24
SEC3YER008C COX13P32799 129 aa1.08□□□□□ -2.24
SEC3YER008C PRS4P38063 326 aaPredicted RBP1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 107 ms