RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C TDA11P38854 504 aa2.44□□□□□ -2.02
VAB2YEL005C FET3P38993 636 aa2.44□□□□□ -2.02
VAB2YEL005C YGR067CP53243 804 aa2.44□□□□□ -2.02
VAB2YEL005C PRO2P54885 456 aaKnown RBP2.44□□□□□ -2.02
VAB2YEL005C SCS7Q03529 384 aa2.44□□□□□ -2.02
VAB2YEL005C SNX41Q04053 625 aa2.44□□□□□ -2.02
VAB2YEL005C PBP4Q07362 185 aaKnown RBP2.44□□□□□ -2.02
VAB2YEL005C YLR012CQ07927 99 aa2.44□□□□□ -2.02
VAB2YEL005C VIK1Q12045 647 aa2.44□□□□□ -2.02
VAB2YEL005C DCP1Q12517 231 aaPredicted RBP2.44□□□□□ -2.02
VAB2YEL005C YIL002W-AQ3E7Z5 69 aa2.44□□□□□ -2.02
VAB2YEL005C AUS1Q08409 1394 aa2.44□□□□□ -2.02
VAB2YEL005C RPL5P26321 297 aaKnown RBP2.43□□□□□ -2.02
VAB2YEL005C YIR035CP40579 254 aa2.43□□□□□ -2.02
VAB2YEL005C UFE1P41834 346 aa2.43□□□□□ -2.02
VAB2YEL005C YFL040WP43562 540 aa2.43□□□□□ -2.02
VAB2YEL005C PMT4P46971 762 aa2.43□□□□□ -2.02
VAB2YEL005C COX16P47081 118 aa2.43□□□□□ -2.02
VAB2YEL005C KEL2P50090 882 aa2.43□□□□□ -2.02
VAB2YEL005C RIB4P50861 169 aaPredicted RBP2.43□□□□□ -2.02
VAB2YEL005C FMP48P53233 369 aa2.43□□□□□ -2.02
VAB2YEL005C OKP1P53298 406 aa2.43□□□□□ -2.02
VAB2YEL005C RNY1Q02933 434 aaKnown RBP2.43□□□□□ -2.02
VAB2YEL005C UBX2Q04228 584 aa2.43□□□□□ -2.02
VAB2YEL005C RRG8Q06109 277 aa2.43□□□□□ -2.02
VAB2YEL005C IES4Q08561 116 aa2.43□□□□□ -2.02
VAB2YEL005C RRP42Q12277 265 aaPredicted RBP2.43□□□□□ -2.02
VAB2YEL005C PAA1Q12447 191 aaKnown RBP2.43□□□□□ -2.02
VAB2YEL005C IFM1P25038 676 aa2.42□□□□□ -2.02
VAB2YEL005C CYM1P32898 989 aa2.42□□□□□ -2.02
VAB2YEL005C SKG6P32900 734 aaPredicted RBP2.42□□□□□ -2.02
VAB2YEL005C YKL187CP34231 750 aa2.42□□□□□ -2.02
VAB2YEL005C YKL162CP36052 402 aa2.42□□□□□ -2.02
VAB2YEL005C SWD2P36104 329 aaPredicted RBP2.42□□□□□ -2.02
VAB2YEL005C DBP7P36120 742 aaKnown RBP2.42□□□□□ -2.02
VAB2YEL005C FRT2P39734 528 aa2.42□□□□□ -2.02
VAB2YEL005C DSE1P40077 573 aa2.42□□□□□ -2.02
VAB2YEL005C MIC19P43594 170 aa2.42□□□□□ -2.02
VAB2YEL005C SDS23P53172 527 aa2.42□□□□□ -2.02
VAB2YEL005C SWC4P53201 476 aa2.42□□□□□ -2.02
VAB2YEL005C DBP6P53734 629 aaKnown RBP2.42□□□□□ -2.02
VAB2YEL005C APC4Q04601 652 aa2.42□□□□□ -2.02
VAB2YEL005C VAC14Q06708 880 aa2.42□□□□□ -2.02
VAB2YEL005C SIA1Q12212 622 aa2.42□□□□□ -2.02
VAB2YEL005C CCH1P50077 2039 aa2.41□□□□□ -2.02
VAB2YEL005C DAL80P26343 269 aa2.41□□□□□ -2.02
VAB2YEL005C RPC25P35718 212 aa2.41□□□□□ -2.02
VAB2YEL005C YIA6P40556 373 aa2.41□□□□□ -2.02
VAB2YEL005C YGL118CP53132 145 aa2.41□□□□□ -2.02
VAB2YEL005C INP2Q03824 705 aa2.41□□□□□ -2.02
VAB2YEL005C YMR244WQ04018 355 aa2.41□□□□□ -2.02
VAB2YEL005C GMC1Q04399 608 aa2.41□□□□□ -2.02
VAB2YEL005C PIN3Q06449 215 aa2.41□□□□□ -2.02
VAB2YEL005C ERP3Q12403 225 aa2.41□□□□□ -2.02
VAB2YEL005C YDL012CQ12489 107 aa2.41□□□□□ -2.02
VAB2YEL005C LAG2Q92325 660 aa2.41□□□□□ -2.02
VAB2YEL005C BI3Q9ZZW7 517 aa2.41□□□□□ -2.02
VAB2YEL005C TDH3P00359 332 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
VAB2YEL005C MSS116P15424 664 aaKnown RBP2.4□□□□□ -2.03
VAB2YEL005C FUS3P16892 353 aaKnown RBP2.4□□□□□ -2.03
VAB2YEL005C ICL1P28240 557 aaPredicted RBP2.4□□□□□ -2.03
VAB2YEL005C MRPL6P32904 214 aa2.4□□□□□ -2.03
VAB2YEL005C MRPL40P36534 297 aa2.4□□□□□ -2.03
VAB2YEL005C SOP4P39543 234 aaPredicted RBP2.4□□□□□ -2.03
VAB2YEL005C BDH1P39714 382 aa2.4□□□□□ -2.03
VAB2YEL005C PCL7P40186 285 aa2.4□□□□□ -2.03
VAB2YEL005C SLM1P40485 686 aa2.4□□□□□ -2.03
VAB2YEL005C ASG7P46993 209 aa2.4□□□□□ -2.03
VAB2YEL005C TPC1P53257 314 aa2.4□□□□□ -2.03
VAB2YEL005C YMR111CQ04461 462 aaPredicted RBP2.4□□□□□ -2.03
VAB2YEL005C CUR1Q06469 252 aa2.4□□□□□ -2.03
VAB2YEL005C YDR018CQ12185 396 aa2.4□□□□□ -2.03
VAB2YEL005C SAL1D6W196 494 aa2.39□□□□□ -2.03
VAB2YEL005C GAL7P08431 366 aa2.39□□□□□ -2.03
VAB2YEL005C CSM1P25651 190 aa2.39□□□□□ -2.03
VAB2YEL005C ZRT3P34240 503 aa2.39□□□□□ -2.03
VAB2YEL005C RCK1P38622 512 aa2.39□□□□□ -2.03
VAB2YEL005C TRR2P38816 342 aa2.39□□□□□ -2.03
VAB2YEL005C PET8P38921 284 aa2.39□□□□□ -2.03
VAB2YEL005C CAX4P53223 239 aa2.39□□□□□ -2.03
VAB2YEL005C YNR066CP53752 436 aa2.39□□□□□ -2.03
VAB2YEL005C ARC18Q05933 178 aaKnown RBP2.39□□□□□ -2.03
VAB2YEL005C YLR413WQ06689 675 aa2.39□□□□□ -2.03
VAB2YEL005C APC9Q12107 265 aa2.39□□□□□ -2.03
VAB2YEL005C YDL211CQ12121 372 aa2.39□□□□□ -2.03
VAB2YEL005C YPR064WQ12492 139 aa2.39□□□□□ -2.03
VAB2YEL005C YOL085CQ99345 113 aa2.39□□□□□ -2.03
VAB2YEL005C UGA1P17649 471 aa2.38□□□□□ -2.03
VAB2YEL005C TPS2P31688 896 aaKnown RBP2.38□□□□□ -2.03
VAB2YEL005C FMT1P32785 401 aa2.38□□□□□ -2.03
VAB2YEL005C MCH2P36032 473 aa2.38□□□□□ -2.03
VAB2YEL005C PNC1P53184 216 aaKnown RBP2.38□□□□□ -2.03
VAB2YEL005C HST4P53688 370 aa2.38□□□□□ -2.03
VAB2YEL005C YNL050CP53952 270 aa2.38□□□□□ -2.03
VAB2YEL005C EGD1Q02642 157 aaKnown RBP2.38□□□□□ -2.03
VAB2YEL005C ILV1P00927 576 aaKnown RBP2.37□□□□□ -2.03
VAB2YEL005C CPT1P17898 393 aa2.37□□□□□ -2.03
VAB2YEL005C GPI12P23797 304 aa2.37□□□□□ -2.03
VAB2YEL005C CDC13P32797 924 aaKnown RBP2.37□□□□□ -2.03
VAB2YEL005C CSE1P33307 960 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms