RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W INP1Q03694 420 aa1.02□□□□□ -2.25
LCD1YDR499W INP2Q03824 705 aa1.02□□□□□ -2.25
LCD1YDR499W VPS20Q04272 221 aa1.02□□□□□ -2.25
LCD1YDR499W UTP15Q04305 513 aaKnown RBP1.02□□□□□ -2.25
LCD1YDR499W GMC1Q04399 608 aa1.02□□□□□ -2.25
LCD1YDR499W YDL211CQ12121 372 aa1.02□□□□□ -2.25
LCD1YDR499W SPS100P13130 326 aa1.01□□□□□ -2.25
LCD1YDR499W RPB9P27999 122 aa1.01□□□□□ -2.25
LCD1YDR499W AGA2P32781 87 aa1.01□□□□□ -2.25
LCD1YDR499W YKL162CP36052 402 aa1.01□□□□□ -2.25
LCD1YDR499W RFT1P38206 574 aaPredicted RBP1.01□□□□□ -2.25
LCD1YDR499W PET8P38921 284 aa1.01□□□□□ -2.25
LCD1YDR499W UTP25P40498 721 aaKnown RBP1.01□□□□□ -2.25
LCD1YDR499W CPR7P47103 393 aa1.01□□□□□ -2.25
LCD1YDR499W ZRG17P53735 605 aa1.01□□□□□ -2.25
LCD1YDR499W SMD1Q02260 146 aaPredicted RBP1.01□□□□□ -2.25
LCD1YDR499W CAB5Q03941 241 aa1.01□□□□□ -2.25
LCD1YDR499W UBX2Q04228 584 aa1.01□□□□□ -2.25
LCD1YDR499W YLR297WQ05899 129 aa1.01□□□□□ -2.25
LCD1YDR499W REX3Q12090 404 aa1.01□□□□□ -2.25
LCD1YDR499W APC2Q12440 853 aa1.01□□□□□ -2.25
LCD1YDR499W DFM1Q12743 341 aaKnown RBP1.01□□□□□ -2.25
LCD1YDR499W MSS116P15424 664 aaKnown RBP1.01□□□□□ -2.25
LCD1YDR499W CPT1P17898 393 aa1.01□□□□□ -2.25
LCD1YDR499W PET18P25362 215 aa1.01□□□□□ -2.25
LCD1YDR499W SKG6P32900 734 aaPredicted RBP1.01□□□□□ -2.25
LCD1YDR499W ZRT3P34240 503 aa1.01□□□□□ -2.25
LCD1YDR499W YMR262WP38430 313 aa1.01□□□□□ -2.25
LCD1YDR499W CTM1P38818 585 aa1.01□□□□□ -2.25
LCD1YDR499W YDR089WP38966 869 aa1.01□□□□□ -2.25
LCD1YDR499W POP2P39008 433 aa1.01□□□□□ -2.25
LCD1YDR499W DSE1P40077 573 aa1.01□□□□□ -2.25
LCD1YDR499W OSW5P40219 148 aa1.01□□□□□ -2.25
LCD1YDR499W OKP1P53298 406 aa1.01□□□□□ -2.25
LCD1YDR499W YPL080CQ02826 108 aa1.01□□□□□ -2.25
LCD1YDR499W ABZ2Q03266 374 aa1.01□□□□□ -2.25
LCD1YDR499W VTI1Q04338 217 aa1.01□□□□□ -2.25
LCD1YDR499W DTD1Q07648 150 aaKnown RBP1.01□□□□□ -2.25
LCD1YDR499W RTC5Q12108 567 aaKnown RBP1.01□□□□□ -2.25
LCD1YDR499W PAA1Q12447 191 aaKnown RBP1.01□□□□□ -2.25
LCD1YDR499W MRPL20P22354 195 aaPredicted RBP1□□□□□ -2.25
LCD1YDR499W SUR1P33300 382 aa1□□□□□ -2.25
LCD1YDR499W SWC5P38326 303 aa1□□□□□ -2.25
LCD1YDR499W SOP4P39543 234 aaPredicted RBP1□□□□□ -2.25
LCD1YDR499W YIL054WP40524 105 aa1□□□□□ -2.25
LCD1YDR499W YIR035CP40579 254 aa1□□□□□ -2.25
LCD1YDR499W COS4P43542 379 aa1□□□□□ -2.25
LCD1YDR499W MIC19P43594 170 aa1□□□□□ -2.25
LCD1YDR499W RIB4P50861 169 aaPredicted RBP1□□□□□ -2.25
LCD1YDR499W RPN14P53196 417 aa1□□□□□ -2.25
LCD1YDR499W YNR066CP53752 436 aa1□□□□□ -2.25
LCD1YDR499W SNX41Q04053 625 aa1□□□□□ -2.25
LCD1YDR499W DIB1Q06819 143 aaPredicted RBP1□□□□□ -2.25
LCD1YDR499W YPL245WQ12179 454 aaKnown RBP1□□□□□ -2.25
LCD1YDR499W TRM10Q12400 293 aa1□□□□□ -2.25
LCD1YDR499W STF1P01098 86 aa1□□□□□ -2.25
LCD1YDR499W CBP2P03874 630 aaPredicted RBP1□□□□□ -2.25
LCD1YDR499W CUP2P15315 225 aa1□□□□□ -2.25
LCD1YDR499W ERD1P16151 362 aa1□□□□□ -2.25
LCD1YDR499W ZRT1P32804 376 aa1□□□□□ -2.25
LCD1YDR499W AST1P35183 429 aa1□□□□□ -2.25
LCD1YDR499W MCH2P36032 473 aa1□□□□□ -2.25
LCD1YDR499W YHR035WP38769 630 aa1□□□□□ -2.25
LCD1YDR499W END3P39013 349 aa1□□□□□ -2.25
LCD1YDR499W SLM1P40485 686 aa1□□□□□ -2.25
LCD1YDR499W CDC40P40968 455 aaPredicted RBP1□□□□□ -2.25
LCD1YDR499W ACT1P60010 375 aaKnown RBP1□□□□□ -2.25
LCD1YDR499W YOR292CQ08743 309 aa1□□□□□ -2.25
LCD1YDR499W TFC7Q12415 435 aa1□□□□□ -2.25
LCD1YDR499W TDH3P00359 332 aaKnown RBP RIP-Chip data0.99□□□□□ -2.25not detected
LCD1YDR499W GCD2P12754 651 aaPredicted RBP0.99□□□□□ -2.25
LCD1YDR499W FET3P38993 636 aa0.99□□□□□ -2.25
LCD1YDR499W YGL118CP53132 145 aa0.99□□□□□ -2.25
LCD1YDR499W YGR266WP53326 701 aa0.99□□□□□ -2.25
LCD1YDR499W DBP6P53734 629 aaKnown RBP0.99□□□□□ -2.25
LCD1YDR499W YMR111CQ04461 462 aaPredicted RBP0.99□□□□□ -2.25
LCD1YDR499W SEC13Q04491 297 aaKnown RBP0.99□□□□□ -2.25
LCD1YDR499W UTP23Q12339 254 aaKnown RBP0.99□□□□□ -2.25
LCD1YDR499W ERP3Q12403 225 aa0.99□□□□□ -2.25
LCD1YDR499W YPR1Q12458 312 aa0.99□□□□□ -2.25
LCD1YDR499W INO2P26798 304 aa0.99□□□□□ -2.25
LCD1YDR499W VPH2P32341 215 aa0.99□□□□□ -2.25
LCD1YDR499W GPX1P36014 167 aa0.99□□□□□ -2.25
LCD1YDR499W MNN9P39107 395 aaKnown RBP0.99□□□□□ -2.25
LCD1YDR499W PES4P39684 611 aa0.99□□□□□ -2.25
LCD1YDR499W SPO73P40031 143 aa0.99□□□□□ -2.25
LCD1YDR499W YIL059CP40520 121 aa0.99□□□□□ -2.25
LCD1YDR499W LOC1P43586 204 aaPredicted RBP0.99□□□□□ -2.25
LCD1YDR499W VOA1P53262 265 aa0.99□□□□□ -2.25
LCD1YDR499W YDR222WQ04925 415 aa0.99□□□□□ -2.25
LCD1YDR499W CUR1Q06469 252 aa0.99□□□□□ -2.25
LCD1YDR499W VAC14Q06708 880 aa0.99□□□□□ -2.25
LCD1YDR499W PBP4Q07362 185 aaKnown RBP0.99□□□□□ -2.25
LCD1YDR499W HRT1Q08273 121 aa0.99□□□□□ -2.25
LCD1YDR499W SAM4Q08985 325 aaKnown RBP0.99□□□□□ -2.25
LCD1YDR499W PRP46Q12417 451 aaPredicted RBP0.99□□□□□ -2.25
LCD1YDR499W PFK27Q12471 397 aaPredicted RBP0.99□□□□□ -2.25
LCD1YDR499W CAR2P07991 424 aaKnown RBP0.98□□□□□ -2.25
LCD1YDR499W RPL31AP0C2H8 113 aaKnown RBP0.98□□□□□ -2.25
LCD1YDR499W RPS23AP0CX29 145 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms