RNA–Protein interactions for RNA: YDR142C

PEX7, Transcript of Peroxisomal signal receptor for peroxisomal matrix proteins, yeast

Gene PEX7, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX7	YDR142C	SRB8	P25648	1427 aa		4.88	□□□□□ -1.63
PEX7	YDR142C	PIS1	P06197	220 aa	Known RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	MRP1	P10662	321 aa	Known RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	HPR1	P17629	752 aa	Known RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	PRS4	P38063	326 aa	Predicted RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	COA1	P40452	197 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	SLM1	P40485	686 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	PCI8	P40512	444 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	DFG10	P40526	253 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	YNL320W	P42840	284 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	YGR210C	P42942	411 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	YFL040W	P43562	540 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	LSG1	P53145	640 aa	Known RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	ALG11	P53954	548 aa	Known RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	DIG1	Q03063	452 aa	Known RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	YMR010W	Q03687	405 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	FMP42	Q04991	504 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	SSQ1	Q05931	657 aa	Predicted RBP	4.87	□□□□□ -1.63
PEX7	YDR142C	YOR029W	Q12243	111 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	EAF3	Q12432	401 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	YOS9	Q99220	542 aa		4.87	□□□□□ -1.63
PEX7	YDR142C	YBT1	P32386	1661 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	DNF3	Q12674	1656 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	TDH2	P00358	332 aa	Known RBP	4.86	□□□□□ -1.63
PEX7	YDR142C	SMF2	P38778	549 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	BIG1	P38813	335 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	YIL152W	P40455	235 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	YIL029C	P40538	142 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	MRM2	P53123	320 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	YMR027W	Q04371	470 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	ASR1	Q06834	288 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	SDO1	Q07953	250 aa	Known RBP	4.86	□□□□□ -1.63
PEX7	YDR142C	THP3	Q12049	470 aa	Known RBP	4.86	□□□□□ -1.63
PEX7	YDR142C	AYT1	Q12226	474 aa		4.86	□□□□□ -1.63
PEX7	YDR142C	ILV1	P00927	576 aa	Known RBP	4.85	□□□□□ -1.63
PEX7	YDR142C	MRS3	P10566	314 aa		4.85	□□□□□ -1.63
PEX7	YDR142C	RNA14	P25298	677 aa	Known RBP	4.85	□□□□□ -1.63
PEX7	YDR142C	RPL16A	P26784	199 aa	Known RBP	4.85	□□□□□ -1.63
PEX7	YDR142C	NUP2	P32499	720 aa		4.85	□□□□□ -1.63
PEX7	YDR142C	AIM29	P36154	155 aa		4.85	□□□□□ -1.63
PEX7	YDR142C	GOR1	P53839	350 aa		4.85	□□□□□ -1.63
PEX7	YDR142C	MRPS17	Q03246	237 aa	Predicted RBP	4.85	□□□□□ -1.63
PEX7	YDR142C	MYO5	Q04439	1219 aa	Known RBP	4.85	□□□□□ -1.63
PEX7	YDR142C	DDC1	Q08949	612 aa		4.85	□□□□□ -1.63
PEX7	YDR142C	JIP3	O13555	125 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	RPL15A	P05748	204 aa	Known RBP	4.84	□□□□□ -1.63
PEX7	YDR142C	CDC36	P06100	191 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX7	YDR142C	YKL063C	P35725	167 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	ASK1	P35734	292 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	AVT5	P38176	459 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	ECM8	P38246	354 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	ARC40	P38328	384 aa	Known RBP	4.84	□□□□□ -1.63
PEX7	YDR142C	MAM33	P40513	266 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	YIA6	P40556	373 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	RPR2	P40571	144 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	CTK3	P46963	296 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX7	YDR142C	KTR6	P54070	446 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	BNA7	Q04066	261 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	SMC5	Q08204	1093 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	POM33	Q12164	279 aa		4.84	□□□□□ -1.63
PEX7	YDR142C	HIS1	P00498	297 aa	Known RBP	4.83	□□□□□ -1.64
PEX7	YDR142C	RPL31A	P0C2H8	113 aa	Known RBP	4.83	□□□□□ -1.64
PEX7	YDR142C	CPR1	P14832	162 aa	Known RBP	4.83	□□□□□ -1.64
PEX7	YDR142C	HEM15	P16622	393 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	RAD51	P25454	400 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	AGA1	P32323	725 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	SPO23	P33757	523 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	RPC37	P36121	282 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	PMT4	P46971	762 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	LCB3	P47013	409 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	SWC4	P53201	476 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	SNX41	Q04053	625 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	YLR012C	Q07927	99 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	MSH5	Q12175	901 aa		4.83	□□□□□ -1.64
PEX7	YDR142C	MATALPHA1	P0CY06	175 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	HMLALPHA1	P0CY07	175 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	RPL16B	P26785	198 aa	Known RBP	4.82	□□□□□ -1.64
PEX7	YDR142C	PPA2	P28239	310 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	ATO2	P32907	282 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	LDB7	P38210	180 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	RPH1	P39956	796 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	DDI1	P40087	428 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	NCA3	P46955	337 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	TAD2	P47058	250 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	CPD1	P53314	239 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
PEX7	YDR142C	NUP116	Q02630	1113 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	OST6	Q03723	332 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	ENT5	Q03769	411 aa	Known RBP	4.82	□□□□□ -1.64
PEX7	YDR142C	KRE28	Q04431	385 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	RTN1	Q04947	295 aa	Known RBP	4.82	□□□□□ -1.64
PEX7	YDR142C	YDL114W	Q07530	308 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	YDL109C	Q12103	647 aa		4.82	□□□□□ -1.64
PEX7	YDR142C	UTP23	Q12339	254 aa	Known RBP	4.82	□□□□□ -1.64
PEX7	YDR142C	SEC7	P11075	2009 aa	Known RBP	4.82	□□□□□ -1.64
PEX7	YDR142C	NHP6B	P11633	99 aa	Known RBP	4.81	□□□□□ -1.64
PEX7	YDR142C	CTA1	P15202	515 aa		4.81	□□□□□ -1.64
PEX7	YDR142C	RPL24B	P24000	155 aa	Known RBP	4.81	□□□□□ -1.64
PEX7	YDR142C	MGM101	P32787	269 aa	Known RBP	4.81	□□□□□ -1.64
PEX7	YDR142C	MAL32	P38158	584 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms