RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	IPK1	Q06667	281 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	VAM3	Q12241	283 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	INP53	Q12271	1107 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	YLR126C	Q12288	251 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	POM34	Q12445	299 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	MHF1	Q3E835	90 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	RIB3	Q99258	208 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	MED11	Q99278	115 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	COX2	P00410	251 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	AI3	P03877	415 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SWC3	YAL011W	VPS21	P36017	210 aa	Known RBP	4.26	□□□□□ -1.73
SWC3	YAL011W	ARA1	P38115	344 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	SAF1	P38352	637 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	MED6	P38782	295 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	RTC3	P38804	111 aa	Predicted RBP	4.26	□□□□□ -1.73
SWC3	YAL011W	YHR122W	P38829	231 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	GIP2	P40036	548 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	COG3	P40094	801 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	MPM1	P40364	252 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	SDP1	P40479	209 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	SER33	P40510	469 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	YFL066C	P43538	392 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	RBL2	P48606	106 aa	Known RBP	4.26	□□□□□ -1.73
SWC3	YAL011W	MUP1	P50276	574 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	FLC3	P53121	802 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	YNL181W	P53878	407 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	YAT1	P80235	687 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	GIP3	Q03016	1276 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	RSM24	Q03976	319 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	VPS74	Q06385	345 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	RXT3	Q07458	294 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	MCA1	Q08601	432 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	FRE5	Q08908	694 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	BTS1	Q12051	335 aa		4.26	□□□□□ -1.73
SWC3	YAL011W	SPS4	P09937	338 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	NHP6B	P11633	99 aa	Known RBP	4.25	□□□□□ -1.73
SWC3	YAL011W	SAC7	P17121	654 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	PPA2	P28239	310 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	CAT2	P32796	670 aa	Known RBP	4.25	□□□□□ -1.73
SWC3	YAL011W	SPO23	P33757	523 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	SBE22	P38814	852 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	SKN7	P38889	622 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	YNL195C	P40168	261 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	MOB1	P40484	314 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	DPB11	P47027	764 aa	Predicted RBP	4.25	□□□□□ -1.73
SWC3	YAL011W	MSE1	P48525	536 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	SLI1	P53304	468 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	SSU72	P53538	206 aa	Predicted RBP	4.25	□□□□□ -1.73
SWC3	YAL011W	GOR1	P53839	350 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	YKR005C	Q02203	525 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	GRX5	Q02784	150 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	TPP1	Q03796	238 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	YMR034C	Q05131	434 aa	Predicted RBP	4.25	□□□□□ -1.73
SWC3	YAL011W	ARR3	Q06598	404 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	YLR040C	Q07988	224 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	MET32	Q12041	191 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	YPL119C-A	Q3E751	87 aa		4.25	□□□□□ -1.73
SWC3	YAL011W	PUT2	P07275	575 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	KIN2	P13186	1147 aa	Known RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	GSH1	P32477	678 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YBR144C	P34215	104 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YPK3	P38070	525 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	PCF11	P39081	626 aa	Predicted RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	SOP4	P39543	234 aa	Predicted RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	UIP3	P39547	235 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	GIM4	P40005	111 aa	Known RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	UBX6	P47049	396 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	IMO32	P53219	342 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	SLX9	P53251	210 aa	Predicted RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	GPI17	Q04080	534 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	ARP10	Q04549	284 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	SWF1	Q04629	336 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YDL114W	Q07530	308 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	ATG10	Q07879	167 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	PAM18	Q07914	168 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	GEP3	Q08622	556 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	PAA1	Q12447	191 aa	Known RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	YPR096C	O13587	100 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	ALG7	P07286	448 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	RPL31B	P0C2H9	113 aa	Known RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	MATALPHA1	P0CY06	175 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	HMLALPHA1	P0CY07	175 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YSR3	P23501	404 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YPS1	P32329	569 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	DOA1	P36037	715 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YPT35	P38815	214 aa	Known RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	IPT1	P38954	527 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	SOK1	P40317	901 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	OYE3	P41816	400 aa	Predicted RBP	4.24	□□□□□ -1.73
SWC3	YAL011W	SPG5	P42933	373 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	SWP82	P43554	623 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YFR020W	P43600	232 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YJL043W	P47053	257 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	STE24	P47154	453 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	NBP35	P52920	328 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	PRM8	P53174	237 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	ZRG17	P53735	605 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	IGO1	P53897	168 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	OCA2	P53949	197 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 99.2 ms