RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 RSM27P53305 110 aa-0.41□□□□□ -2.48
snR50snR50 YGR266WP53326 701 aa-0.41□□□□□ -2.48
snR50snR50 VPS75P53853 264 aa-0.41□□□□□ -2.48
snR50snR50 SVL3Q03088 825 aaKnown RBP-0.41□□□□□ -2.48
snR50snR50 CAB5Q03941 241 aa-0.41□□□□□ -2.48
snR50snR50 DON1Q05610 365 aa-0.41□□□□□ -2.48
snR50snR50 SLM3Q12093 417 aa-0.41□□□□□ -2.48
snR50snR50 RPL13AQ12690 199 aaPredicted RBP-0.41□□□□□ -2.48
snR50snR50 CDC42P19073 191 aa-0.42□□□□□ -2.48
snR50snR50 MDH2P22133 377 aa-0.42□□□□□ -2.48
snR50snR50 RRP7P25368 297 aaPredicted RBP-0.42□□□□□ -2.48
snR50snR50 VPH2P32341 215 aa-0.42□□□□□ -2.48
snR50snR50 CAT2P32796 670 aaKnown RBP-0.42□□□□□ -2.48
snR50snR50 COY1P34237 679 aa-0.42□□□□□ -2.48
snR50snR50 DOA1P36037 715 aa-0.42□□□□□ -2.48
snR50snR50 ICE2P40499 491 aa-0.42□□□□□ -2.48
snR50snR50 CAK1P43568 368 aaPredicted RBP-0.42□□□□□ -2.48
snR50snR50 RMD8P43620 662 aa-0.42□□□□□ -2.48
snR50snR50 YJL118WP47022 219 aa-0.42□□□□□ -2.48
snR50snR50 TOM22P49334 152 aa-0.42□□□□□ -2.48
snR50snR50 YGL138CP53122 345 aa-0.42□□□□□ -2.48
snR50snR50 SKO1Q02100 647 aa-0.42□□□□□ -2.48
snR50snR50 TRM82Q03774 444 aa-0.42□□□□□ -2.48
snR50snR50 RRB1Q04225 511 aaKnown RBP-0.42□□□□□ -2.48
snR50snR50 OPY2Q06810 360 aa-0.42□□□□□ -2.48
snR50snR50 YOL075CQ08234 1294 aa-0.42□□□□□ -2.48
snR50snR50 AGC1Q12482 902 aa-0.42□□□□□ -2.48
snR50snR50 YPL119C-AQ3E751 87 aa-0.42□□□□□ -2.48
snR50snR50 GCN4P03069 281 aa-0.43□□□□□ -2.48
snR50snR50 PUT1P09368 476 aa-0.43□□□□□ -2.48
snR50snR50 RPL12AP0CX53 165 aaKnown RBP-0.43□□□□□ -2.48
snR50snR50 RPL12BP0CX54 165 aa-0.43□□□□□ -2.48
snR50snR50 MRPL8P22353 238 aa-0.43□□□□□ -2.48
snR50snR50 MRPL20P22354 195 aaPredicted RBP-0.43□□□□□ -2.48
snR50snR50 PPH21P23594 369 aa-0.43□□□□□ -2.48
snR50snR50 HSP104P31539 908 aaKnown RBP-0.43□□□□□ -2.48
snR50snR50 OLA1P38219 394 aaKnown RBP-0.43□□□□□ -2.48
snR50snR50 SRP72P38688 640 aaKnown RBP-0.43□□□□□ -2.48
snR50snR50 INM1P38710 295 aa-0.43□□□□□ -2.48
snR50snR50 YDR089WP38966 869 aa-0.43□□□□□ -2.48
snR50snR50 TIF34P40217 347 aaKnown RBP-0.43□□□□□ -2.48
snR50snR50 MNP1P53163 194 aaPredicted RBP-0.43□□□□□ -2.48
snR50snR50 CAB4P53332 305 aa-0.43□□□□□ -2.48
snR50snR50 ALG9P53868 555 aaKnown RBP-0.43□□□□□ -2.48
snR50snR50 OSH6Q02201 448 aa-0.43□□□□□ -2.48
snR50snR50 FCF1Q05498 189 aaPredicted RBP-0.43□□□□□ -2.48
snR50snR50 YLH47Q06493 454 aa-0.43□□□□□ -2.48
snR50snR50 NSE1Q07913 336 aa-0.43□□□□□ -2.48
snR50snR50 GAT3Q07928 141 aa-0.43□□□□□ -2.48
snR50snR50 APC5Q08683 685 aa-0.43□□□□□ -2.48
snR50snR50 YOR268CQ08734 132 aa-0.43□□□□□ -2.48
snR50snR50 MED2Q12124 431 aa-0.43□□□□□ -2.48
snR50snR50 RPS14AP06367 137 aaKnown RBP-0.44□□□□□ -2.48
snR50snR50 RPL3P14126 387 aaKnown RBP-0.44□□□□□ -2.48
snR50snR50 NSP1P14907 823 aaKnown RBP-0.44□□□□□ -2.48
snR50snR50 PCH2P38126 564 aa-0.44□□□□□ -2.48
snR50snR50 YBR219CP38317 127 aa-0.44□□□□□ -2.48
snR50snR50 STN1P38960 494 aa-0.44□□□□□ -2.48
snR50snR50 RPS14BP39516 138 aaKnown RBP-0.44□□□□□ -2.48
snR50snR50 AVT2P39981 480 aa-0.44□□□□□ -2.48
snR50snR50 NOP16P40007 231 aaKnown RBP-0.44□□□□□ -2.48
snR50snR50 DSE1P40077 573 aa-0.44□□□□□ -2.48
snR50snR50 OST3P48439 350 aa-0.44□□□□□ -2.48
snR50snR50 AAH1P53909 347 aa-0.44□□□□□ -2.48
snR50snR50 STE23Q06010 1027 aa-0.44□□□□□ -2.48
snR50snR50 CSI2Q08054 341 aa-0.44□□□□□ -2.48
snR50snR50 RNH203Q12338 110 aa-0.44□□□□□ -2.48
snR50snR50 UBA3Q99344 299 aa-0.44□□□□□ -2.48
snR50snR50 CDC21P06785 304 aa-0.45□□□□□ -2.48
snR50snR50 RAD10P06838 210 aa-0.45□□□□□ -2.48
snR50snR50 RNA1P11745 407 aaKnown RBP-0.45□□□□□ -2.48
snR50snR50 SRV2P17555 526 aaKnown RBP-0.45□□□□□ -2.48
snR50snR50 GPI10P30777 616 aa-0.45□□□□□ -2.48
snR50snR50 SCM4P32564 187 aa-0.45□□□□□ -2.48
snR50snR50 MUD2P36084 527 aaKnown RBP-0.45□□□□□ -2.48
snR50snR50 ZTA1P38230 334 aaKnown RBP-0.45□□□□□ -2.48
snR50snR50 YEL067CP39978 195 aa-0.45□□□□□ -2.48
snR50snR50 VTC1P40046 129 aaRIP-Chip data-0.45□□□□□ -2.48not detected
snR50snR50 IES5P40060 125 aa-0.45□□□□□ -2.48
snR50snR50 PMT4P46971 762 aa-0.45□□□□□ -2.48
snR50snR50 RPT4P53549 437 aaKnown RBP-0.45□□□□□ -2.48
snR50snR50 SED1Q01589 338 aa-0.45□□□□□ -2.48
snR50snR50 ERO1Q03103 563 aa-0.45□□□□□ -2.48
snR50snR50 URC2Q04411 772 aa-0.45□□□□□ -2.48
snR50snR50 DCS1Q06151 350 aa-0.45□□□□□ -2.48
snR50snR50 SPH1Q06160 661 aa-0.45□□□□□ -2.48
snR50snR50 YLR162WQ06235 118 aa-0.45□□□□□ -2.48
snR50snR50 GRX6Q12438 231 aa-0.45□□□□□ -2.48
snR50snR50 ENT1Q12518 454 aa-0.45□□□□□ -2.48
snR50snR50 UBR2Q07963 1872 aa-0.46□□□□□ -2.48
snR50snR50 RAS2P01120 322 aaKnown RBP-0.46□□□□□ -2.48
snR50snR50 DSF1P0CX08 502 aa-0.46□□□□□ -2.48
snR50snR50 YNR073CP0CX09 502 aa-0.46□□□□□ -2.48
snR50snR50 FBA1P14540 359 aaKnown RBP-0.46□□□□□ -2.48
snR50snR50 IMP2'P32351 346 aa-0.46□□□□□ -2.48
snR50snR50 VAM7P32912 316 aa-0.46□□□□□ -2.48
snR50snR50 AIM29P36154 155 aa-0.46□□□□□ -2.48
snR50snR50 ASC1P38011 319 aaKnown RBP-0.46□□□□□ -2.48
snR50snR50 SIF2P38262 535 aa-0.46□□□□□ -2.48
snR50snR50 UTP9P38882 575 aaKnown RBP-0.46□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms