RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W HPR1P17629 752 aaKnown RBP3.28□□□□□ -1.88
USV1YPL230W RPL16AP26784 199 aaKnown RBP3.28□□□□□ -1.88
USV1YPL230W ARO4P32449 370 aaKnown RBP3.28□□□□□ -1.88
USV1YPL230W TCD1P38756 429 aa3.28□□□□□ -1.88
USV1YPL230W YHR045WP38775 560 aa3.28□□□□□ -1.88
USV1YPL230W SMF2P38778 549 aa3.28□□□□□ -1.88
USV1YPL230W YFL040WP43562 540 aa3.28□□□□□ -1.88
USV1YPL230W SEH1P53011 349 aaKnown RBP3.28□□□□□ -1.88
USV1YPL230W LSG1P53145 640 aaKnown RBP3.28□□□□□ -1.88
USV1YPL230W MST27P53176 234 aa3.28□□□□□ -1.88
USV1YPL230W TIM21P53220 239 aa3.28□□□□□ -1.88
USV1YPL230W PET117Q02771 107 aa3.28□□□□□ -1.88
USV1YPL230W YPL077CQ02831 240 aa3.28□□□□□ -1.88
USV1YPL230W YMR027WQ04371 470 aa3.28□□□□□ -1.88
USV1YPL230W YLR283WQ05867 314 aa3.28□□□□□ -1.88
USV1YPL230W RIF2Q06208 395 aa3.28□□□□□ -1.88
USV1YPL230W YDL114WQ07530 308 aa3.28□□□□□ -1.88
USV1YPL230W MFG1Q07684 458 aa3.28□□□□□ -1.88
USV1YPL230W YDL199CQ12407 687 aa3.28□□□□□ -1.88
USV1YPL230W ADF1Q2V2Q1 113 aa3.28□□□□□ -1.88
USV1YPL230W TDH3P00359 332 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
USV1YPL230W SPT15P13393 240 aaKnown RBP3.27□□□□□ -1.89
USV1YPL230W DAL82P21705 255 aa3.27□□□□□ -1.89
USV1YPL230W YSR3P23501 404 aa3.27□□□□□ -1.89
USV1YPL230W VPS3P23643 1011 aa3.27□□□□□ -1.89
USV1YPL230W RVS161P25343 265 aaKnown RBP3.27□□□□□ -1.89
USV1YPL230W NAM9P27929 486 aa3.27□□□□□ -1.89
USV1YPL230W CWP1P28319 239 aa3.27□□□□□ -1.89
USV1YPL230W MSN4P33749 630 aa3.27□□□□□ -1.89
USV1YPL230W SWD2P36104 329 aaPredicted RBP3.27□□□□□ -1.89
USV1YPL230W DTR1P38125 572 aa3.27□□□□□ -1.89
USV1YPL230W PTI1P39927 425 aaPredicted RBP3.27□□□□□ -1.89
USV1YPL230W PAN6P40459 309 aa3.27□□□□□ -1.89
USV1YPL230W REE1P40893 198 aa3.27□□□□□ -1.89
USV1YPL230W EGT2P42835 1041 aa3.27□□□□□ -1.89
USV1YPL230W SHY1P53266 389 aa3.27□□□□□ -1.89
USV1YPL230W REX2P54964 269 aaKnown RBP3.27□□□□□ -1.89
USV1YPL230W SED5Q01590 340 aa3.27□□□□□ -1.89
USV1YPL230W YHC1Q05900 231 aaKnown RBP3.27□□□□□ -1.89
USV1YPL230W HRI1Q05905 244 aaKnown RBP3.27□□□□□ -1.89
USV1YPL230W CTS2Q06350 511 aa3.27□□□□□ -1.89
USV1YPL230W SLM3Q12093 417 aa3.27□□□□□ -1.89
USV1YPL230W YDL109CQ12103 647 aa3.27□□□□□ -1.89
USV1YPL230W ATG31Q12421 196 aa3.27□□□□□ -1.89
USV1YPL230W QCR6P00127 147 aa3.26□□□□□ -1.89
USV1YPL230W RPL23AP0CX41 137 aaKnown RBP3.26□□□□□ -1.89
USV1YPL230W RPL23BP0CX42 137 aaKnown RBP3.26□□□□□ -1.89
USV1YPL230W SUA5P32579 426 aa3.26□□□□□ -1.89
USV1YPL230W HEM14P40012 539 aa3.26□□□□□ -1.89
USV1YPL230W SHQ1P40486 507 aaPredicted RBP3.26□□□□□ -1.89
USV1YPL230W MSS2P40990 351 aa3.26□□□□□ -1.89
USV1YPL230W OTU1P43558 301 aa3.26□□□□□ -1.89
USV1YPL230W BNA6P43619 295 aa3.26□□□□□ -1.89
USV1YPL230W CGR1P53188 120 aa3.26□□□□□ -1.89
USV1YPL230W BOR1P53838 576 aa3.26□□□□□ -1.89
USV1YPL230W IMP4P53941 290 aaKnown RBP3.26□□□□□ -1.89
USV1YPL230W ALG11P53954 548 aaKnown RBP3.26□□□□□ -1.89
USV1YPL230W IRC4Q03036 179 aa3.26□□□□□ -1.89
USV1YPL230W COX20Q04935 205 aa3.26□□□□□ -1.89
USV1YPL230W PBP4Q07362 185 aaKnown RBP3.26□□□□□ -1.89
USV1YPL230W YLR012CQ07927 99 aa3.26□□□□□ -1.89
USV1YPL230W RSA1Q08932 381 aa3.26□□□□□ -1.89
USV1YPL230W APC9Q12107 265 aa3.26□□□□□ -1.89
USV1YPL230W SSK22P25390 1331 aaPredicted RBP3.25□□□□□ -1.89
USV1YPL230W RPS14AP06367 137 aaKnown RBP3.25□□□□□ -1.89
USV1YPL230W RAD3P06839 778 aa3.25□□□□□ -1.89
USV1YPL230W RPS18AP0CX55 146 aaKnown RBP3.25□□□□□ -1.89
USV1YPL230W RPS18BP0CX56 146 aaPredicted RBP3.25□□□□□ -1.89
USV1YPL230W NUP2P32499 720 aa3.25□□□□□ -1.89
USV1YPL230W ZRT1P32804 376 aa3.25□□□□□ -1.89
USV1YPL230W CYM1P32898 989 aa3.25□□□□□ -1.89
USV1YPL230W IMP3P32899 183 aaPredicted RBP3.25□□□□□ -1.89
USV1YPL230W RPS14BP39516 138 aaKnown RBP3.25□□□□□ -1.89
USV1YPL230W RTR1P40084 226 aaPredicted RBP3.25□□□□□ -1.89
USV1YPL230W SLM1P40485 686 aa3.25□□□□□ -1.89
USV1YPL230W PMT4P46971 762 aa3.25□□□□□ -1.89
USV1YPL230W YJL118WP47022 219 aa3.25□□□□□ -1.89
USV1YPL230W BNS1P50084 137 aa3.25□□□□□ -1.89
USV1YPL230W CRH1P53301 507 aa3.25□□□□□ -1.89
USV1YPL230W PGA2P53903 129 aa3.25□□□□□ -1.89
USV1YPL230W YPL080CQ02826 108 aa3.25□□□□□ -1.89
USV1YPL230W YMR209CQ03648 457 aa3.25□□□□□ -1.89
USV1YPL230W YMR010WQ03687 405 aa3.25□□□□□ -1.89
USV1YPL230W TRM82Q03774 444 aa3.25□□□□□ -1.89
USV1YPL230W ATG38Q05789 226 aaKnown RBP3.25□□□□□ -1.89
USV1YPL230W SDO1Q07953 250 aaKnown RBP3.25□□□□□ -1.89
USV1YPL230W BSC6Q08280 497 aa3.25□□□□□ -1.89
USV1YPL230W FDH1Q08911 376 aa3.25□□□□□ -1.89
USV1YPL230W DDC1Q08949 612 aa3.25□□□□□ -1.89
USV1YPL230W YPQ1Q12010 308 aa3.25□□□□□ -1.89
USV1YPL230W FRE8Q12209 686 aa3.25□□□□□ -1.89
USV1YPL230W RPN6Q12377 434 aa3.25□□□□□ -1.89
USV1YPL230W ERP3Q12403 225 aa3.25□□□□□ -1.89
USV1YPL230W IZH2Q12442 317 aa3.25□□□□□ -1.89
USV1YPL230W IZH4Q99393 312 aa3.25□□□□□ -1.89
USV1YPL230W SAC3P46674 1301 aa3.24□□□□□ -1.89
USV1YPL230W SAL1D6W196 494 aa3.24□□□□□ -1.89
USV1YPL230W ADH2P00331 348 aaKnown RBP3.24□□□□□ -1.89
USV1YPL230W HEM4P06174 275 aa3.24□□□□□ -1.89
USV1YPL230W RPB5P20434 215 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms