RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W IBA57P47158 497 aa3.34□□□□□ -1.88
MSD1YPL104W HMS2P47175 358 aa3.34□□□□□ -1.88
MSD1YPL104W SUN4P53616 420 aa3.34□□□□□ -1.88
MSD1YPL104W MEH1Q02205 184 aa3.34□□□□□ -1.88
MSD1YPL104W REC102Q02721 264 aa3.34□□□□□ -1.88
MSD1YPL104W SIZ1Q04195 904 aa3.34□□□□□ -1.88
MSD1YPL104W NAT4Q04751 285 aa3.34□□□□□ -1.88
MSD1YPL104W MFB1Q04922 465 aa3.34□□□□□ -1.88
MSD1YPL104W STP3Q05937 343 aa3.34□□□□□ -1.88
MSD1YPL104W YLR446WQ06204 433 aa3.34□□□□□ -1.88
MSD1YPL104W YDL114WQ07530 308 aa3.34□□□□□ -1.88
MSD1YPL104W YEH1Q07804 573 aa3.34□□□□□ -1.88
MSD1YPL104W YOR389WQ08912 624 aa3.34□□□□□ -1.88
MSD1YPL104W YPL191CQ08930 360 aa3.34□□□□□ -1.88
MSD1YPL104W IES3Q12345 250 aa3.34□□□□□ -1.88
MSD1YPL104W YOL163WP0CF20 169 aa3.33□□□□□ -1.88
MSD1YPL104W HIR2P32480 875 aa3.33□□□□□ -1.88
MSD1YPL104W TPO5P36029 618 aa3.33□□□□□ -1.88
MSD1YPL104W AUR1P36107 401 aaPredicted RBP3.33□□□□□ -1.88
MSD1YPL104W VPS51P36116 164 aa3.33□□□□□ -1.88
MSD1YPL104W YBR139WP38109 508 aa3.33□□□□□ -1.88
MSD1YPL104W FES1P38260 290 aa3.33□□□□□ -1.88
MSD1YPL104W ARN2P38724 620 aa3.33□□□□□ -1.88
MSD1YPL104W SBE22P38814 852 aa3.33□□□□□ -1.88
MSD1YPL104W TRR2P38816 342 aa3.33□□□□□ -1.88
MSD1YPL104W GID8P40208 455 aa3.33□□□□□ -1.88
MSD1YPL104W FET5P43561 622 aa3.33□□□□□ -1.88
MSD1YPL104W CHA4P43634 648 aa3.33□□□□□ -1.88
MSD1YPL104W IMD4P50094 524 aaKnown RBP3.33□□□□□ -1.88
MSD1YPL104W MPC1P53157 130 aaKnown RBP3.33□□□□□ -1.88
MSD1YPL104W PEF1P53238 335 aa3.33□□□□□ -1.88
MSD1YPL104W NUP49Q02199 472 aa3.33□□□□□ -1.88
MSD1YPL104W RRP17Q04031 235 aaPredicted RBP3.33□□□□□ -1.88
MSD1YPL104W GAL83Q04739 417 aa3.33□□□□□ -1.88
MSD1YPL104W BNA5Q05979 453 aa3.33□□□□□ -1.88
MSD1YPL104W SIA1Q12212 622 aa3.33□□□□□ -1.88
MSD1YPL104W RBD2Q12270 262 aa3.33□□□□□ -1.88
MSD1YPL104W YOR214CQ12282 236 aa3.33□□□□□ -1.88
MSD1YPL104W COX17Q12287 69 aa3.33□□□□□ -1.88
MSD1YPL104W MDH1P17505 334 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
MSD1YPL104W YCK1P23291 538 aa3.32□□□□□ -1.88
MSD1YPL104W CWP1P28319 239 aa3.32□□□□□ -1.88
MSD1YPL104W OAC1P32332 324 aa3.32□□□□□ -1.88
MSD1YPL104W MTC7P32633 139 aa3.32□□□□□ -1.88
MSD1YPL104W RPS0AP32905 252 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W YOR062CP36025 268 aa3.32□□□□□ -1.88
MSD1YPL104W MSS4P38994 779 aa3.32□□□□□ -1.88
MSD1YPL104W DDI1P40087 428 aa3.32□□□□□ -1.88
MSD1YPL104W LTP1P40347 161 aa3.32□□□□□ -1.88
MSD1YPL104W JHD2P47156 728 aaPredicted RBP3.32□□□□□ -1.88
MSD1YPL104W BAT2P47176 376 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W YPL068CQ02749 293 aa3.32□□□□□ -1.88
MSD1YPL104W SNZ1Q03148 297 aa3.32□□□□□ -1.88
MSD1YPL104W SSY1Q03770 852 aa3.32□□□□□ -1.88
MSD1YPL104W YMR087WQ04299 284 aa3.32□□□□□ -1.88
MSD1YPL104W MGR3Q04472 501 aa3.32□□□□□ -1.88
MSD1YPL104W VBA4Q04602 768 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W UTP21Q06078 939 aaPredicted RBP3.32□□□□□ -1.88
MSD1YPL104W YPR091CQ06833 770 aa3.32□□□□□ -1.88
MSD1YPL104W YLR030WQ07967 263 aa3.32□□□□□ -1.88
MSD1YPL104W SKI7Q08491 747 aaPredicted RBP3.32□□□□□ -1.88
MSD1YPL104W RKM5Q12367 367 aa3.32□□□□□ -1.88
MSD1YPL104W PNS1Q12412 539 aa3.32□□□□□ -1.88
MSD1YPL104W SKM1Q12469 655 aa3.32□□□□□ -1.88
MSD1YPL104W CAR2P07991 424 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W SNF6P18888 332 aa3.32□□□□□ -1.88
MSD1YPL104W MCK1P21965 375 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W APN1P22936 367 aa3.32□□□□□ -1.88
MSD1YPL104W SED4P25365 1065 aa3.32□□□□□ -1.88
MSD1YPL104W CHA1P25379 360 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W PTR2P32901 601 aa3.32□□□□□ -1.88
MSD1YPL104W MTH1P35198 433 aa3.32□□□□□ -1.88
MSD1YPL104W FMP23P38231 175 aa3.32□□□□□ -1.88
MSD1YPL104W YHR097CP38809 366 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W PEX18P38855 283 aa3.32□□□□□ -1.88
MSD1YPL104W MDM31P38880 579 aa3.32□□□□□ -1.88
MSD1YPL104W GDI1P39958 451 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W JLP2P40206 208 aa3.32□□□□□ -1.88
MSD1YPL104W YPS6P40583 537 aa3.32□□□□□ -1.88
MSD1YPL104W PRY1P47032 299 aa3.32□□□□□ -1.88
MSD1YPL104W TOS2P50078 622 aa3.32□□□□□ -1.88
MSD1YPL104W BSC5P53755 489 aa3.32□□□□□ -1.88
MSD1YPL104W COS1P53822 381 aa3.32□□□□□ -1.88
MSD1YPL104W ERG13P54839 491 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W ARG5,6Q01217 863 aa3.32□□□□□ -1.88
MSD1YPL104W CTL1Q03220 320 aaKnown RBP3.32□□□□□ -1.88
MSD1YPL104W MAK3Q03503 176 aa3.32□□□□□ -1.88
MSD1YPL104W RCF1Q03713 159 aa3.32□□□□□ -1.88
MSD1YPL104W SMA2Q04658 369 aa3.32□□□□□ -1.88
MSD1YPL104W YDL211CQ12121 372 aa3.32□□□□□ -1.88
MSD1YPL104W TPO4Q12256 659 aa3.32□□□□□ -1.88
MSD1YPL104W KGD1P20967 1014 aaKnown RBP3.31□□□□□ -1.88
MSD1YPL104W PRE4P30657 266 aa3.31□□□□□ -1.88
MSD1YPL104W ARC19P33204 171 aaKnown RBP3.31□□□□□ -1.88
MSD1YPL104W SRO77P38163 1010 aa3.31□□□□□ -1.88
MSD1YPL104W ECM34P38728 170 aa3.31□□□□□ -1.88
MSD1YPL104W YHR035WP38769 630 aa3.31□□□□□ -1.88
MSD1YPL104W FMP52P40008 231 aa3.31□□□□□ -1.88
MSD1YPL104W BUR6P40096 142 aa3.31□□□□□ -1.88
MSD1YPL104W IRC7P43623 340 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms