RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W GET4Q12125 312 aa2.12□□□□□ -2.07
SNU114YKL173W YDL009CQ12210 107 aa2.12□□□□□ -2.07
SNU114YKL173W MED4Q12343 284 aa2.12□□□□□ -2.07
SNU114YKL173W NUP192P47054 1683 aa2.12□□□□□ -2.07
SNU114YKL173W TDH3P00359 332 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SNU114YKL173W COX2P00410 251 aa2.12□□□□□ -2.07
SNU114YKL173W BMH1P29311 267 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W DEG1P31115 442 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W REC114P32841 428 aa2.12□□□□□ -2.07
SNU114YKL173W SPO23P33757 523 aa2.12□□□□□ -2.07
SNU114YKL173W RTC3P38804 111 aaPredicted RBP2.12□□□□□ -2.07
SNU114YKL173W SNL1P40548 159 aa2.12□□□□□ -2.07
SNU114YKL173W AVT4P50944 713 aa2.12□□□□□ -2.07
SNU114YKL173W MRPL51Q06090 140 aaPredicted RBP2.12□□□□□ -2.07
SNU114YKL173W URB1P34241 1764 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W ARG4P04076 463 aaPredicted RBP2.12□□□□□ -2.07
SNU114YKL173W ARF1P11076 181 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W MRPL8P22353 238 aa2.12□□□□□ -2.07
SNU114YKL173W AIM29P36154 155 aa2.12□□□□□ -2.07
SNU114YKL173W IST2P38250 946 aa2.12□□□□□ -2.07
SNU114YKL173W SUR2P38992 349 aa2.12□□□□□ -2.07
SNU114YKL173W SHO1P40073 367 aa2.12□□□□□ -2.07
SNU114YKL173W FMC1P40491 155 aa2.12□□□□□ -2.07
SNU114YKL173W AGE2P40529 298 aa2.12□□□□□ -2.07
SNU114YKL173W YRB1P41920 201 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W BIO4P53630 237 aa2.12□□□□□ -2.07
SNU114YKL173W CUS2P53830 285 aaPredicted RBP2.12□□□□□ -2.07
SNU114YKL173W TDA7P53882 636 aaPredicted RBP2.12□□□□□ -2.07
SNU114YKL173W SLT2Q00772 484 aa2.12□□□□□ -2.07
SNU114YKL173W SPC2Q04969 178 aa2.12□□□□□ -2.07
SNU114YKL173W GRS2Q06817 618 aa2.12□□□□□ -2.07
SNU114YKL173W YLL053CP0CD98 152 aa2.11□□□□□ -2.07
SNU114YKL173W RPS24AP0CX31 135 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W RPS24BP0CX32 135 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W TIP1P27654 210 aaPredicted RBP2.11□□□□□ -2.07
SNU114YKL173W MYO3P36006 1272 aa2.11□□□□□ -2.07
SNU114YKL173W CBP4P37267 147 aa2.11□□□□□ -2.07
SNU114YKL173W TCD1P38756 429 aa2.11□□□□□ -2.07
SNU114YKL173W MST28P39552 234 aa2.11□□□□□ -2.07
SNU114YKL173W VRG4P40107 337 aa2.11□□□□□ -2.07
SNU114YKL173W VMA10P48836 114 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W LSG1P53145 640 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W IRC15Q02733 499 aa2.11□□□□□ -2.07
SNU114YKL173W ENT5Q03769 411 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W DSE3Q08729 430 aa2.11□□□□□ -2.07
SNU114YKL173W RAD7P06779 565 aa2.11□□□□□ -2.07
SNU114YKL173W CLN3P13365 580 aa2.11□□□□□ -2.07
SNU114YKL173W MET16P18408 261 aaPredicted RBP2.11□□□□□ -2.07
SNU114YKL173W OSM1P21375 501 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W GPI12P23797 304 aa2.11□□□□□ -2.07
SNU114YKL173W GLC7P32598 312 aaKnown RBP2.11□□□□□ -2.07
SNU114YKL173W SPR1P32603 445 aa2.11□□□□□ -2.07
SNU114YKL173W COS9P36034 407 aa2.11□□□□□ -2.07
SNU114YKL173W YHR045WP38775 560 aa2.11□□□□□ -2.07
SNU114YKL173W DSE1P40077 573 aa2.11□□□□□ -2.07
SNU114YKL173W BTT1P40314 149 aaPredicted RBP2.11□□□□□ -2.07
SNU114YKL173W CTK3P46963 296 aaPredicted RBP2.11□□□□□ -2.07
SNU114YKL173W LST7P53237 242 aa2.11□□□□□ -2.07
SNU114YKL173W YGR117CP53270 476 aa2.11□□□□□ -2.07
SNU114YKL173W YNL234WP53857 426 aa2.11□□□□□ -2.07
SNU114YKL173W HXT11P54862 567 aa2.11□□□□□ -2.07
SNU114YKL173W YMR254CQ04838 102 aa2.11□□□□□ -2.07
SNU114YKL173W SNA4Q07549 140 aa2.11□□□□□ -2.07
SNU114YKL173W TDH2P00358 332 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W CAP2P13517 287 aa2.1□□□□□ -2.07
SNU114YKL173W YAK1P14680 807 aa2.1□□□□□ -2.07
SNU114YKL173W EXG1P23776 448 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W SLM5P25345 492 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W ATP7P30902 174 aa2.1□□□□□ -2.07
SNU114YKL173W PHA2P32452 334 aa2.1□□□□□ -2.07
SNU114YKL173W CYM1P32898 989 aa2.1□□□□□ -2.07
SNU114YKL173W SKT5P34226 696 aa2.1□□□□□ -2.07
SNU114YKL173W RPC25P35718 212 aa2.1□□□□□ -2.07
SNU114YKL173W YPT52P36018 234 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W RIM2P38127 377 aa2.1□□□□□ -2.07
SNU114YKL173W FAA2P39518 744 aa2.1□□□□□ -2.07
SNU114YKL173W FHL1P39521 936 aa2.1□□□□□ -2.07
SNU114YKL173W RCY1P39531 840 aa2.1□□□□□ -2.07
SNU114YKL173W EDC3P39998 551 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W MMF1P40185 145 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W UTP25P40498 721 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W PXR1P53335 271 aaPredicted RBP2.1□□□□□ -2.07
SNU114YKL173W NUP116Q02630 1113 aa2.1□□□□□ -2.07
SNU114YKL173W YDC1Q02896 317 aa2.1□□□□□ -2.07
SNU114YKL173W CSM3Q04659 317 aa2.1□□□□□ -2.07
SNU114YKL173W COX20Q04935 205 aa2.1□□□□□ -2.07
SNU114YKL173W CTS2Q06350 511 aa2.1□□□□□ -2.07
SNU114YKL173W SGT1Q08446 395 aa2.1□□□□□ -2.07
SNU114YKL173W RAX1Q08760 435 aa2.1□□□□□ -2.07
SNU114YKL173W NCA2Q12374 616 aa2.1□□□□□ -2.07
SNU114YKL173W PRP46Q12417 451 aaPredicted RBP2.1□□□□□ -2.07
SNU114YKL173W LSO2Q3E772 92 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W NCB2Q92317 146 aa2.1□□□□□ -2.07
SNU114YKL173W SAR1P20606 190 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W PBN1P25580 416 aa2.1□□□□□ -2.07
SNU114YKL173W CWP1P28319 239 aa2.1□□□□□ -2.07
SNU114YKL173W MKK1P32490 508 aa2.1□□□□□ -2.07
SNU114YKL173W SPT10P35208 640 aa2.1□□□□□ -2.07
SNU114YKL173W MCR1P36060 302 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W DTR1P38125 572 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms