RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	SED5	Q01590	340 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	TRS31	Q03337	283 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	YMR206W	Q03695	313 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	HRD1	Q08109	551 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	THI21	Q08975	551 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	PER33	Q12144	273 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	TY1A-BL	Q12266	440 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	RMD5	Q12508	421 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	MMS1	Q06211	1407 aa		3.56	□□□□□ -1.84
MCD4	YKL165C	TRM3	Q07527	1436 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	RPS28B	P0C0X0	67 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	PYC1	P11154	1178 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	PUT3	P25502	979 aa	Predicted RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	BNA4	P38169	460 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	TRM7	P38238	310 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	RFC5	P38251	354 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	GIC1	P38785	314 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	RSM27	P53305	110 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	DUS1	P53759	423 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	NRK1	P53915	240 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	CSN9	Q03981	162 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	YML096W	Q04489	525 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	YMR315W	Q04869	349 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	RRP45	Q05636	305 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	LDS2	Q08218	356 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	ZEO1	Q08245	113 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	DCN1	Q12395	269 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	PSF1	Q12488	208 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	CDC28	P00546	298 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	RFA1	P22336	621 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	SGE1	P33335	543 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	TRM2	P33753	639 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	PTC1	P35182	281 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	MRPL16	P38064	232 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	AIM18	P38884	321 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	YJL193W	P39542	402 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	COX15	P40086	486 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	PGD1	P40356	397 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	TAX4	P47030	604 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	ASN2	P49090	572 aa	Known RBP	3.55	□□□□□ -1.84
MCD4	YKL165C	ROG1	P53118	685 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	BIO4	P53630	237 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	CAF40	P53829	373 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	SAE3	P89114	91 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	TY1A-MR1	Q04215	440 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	YPR196W	Q06595	470 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	HNT3	Q08702	217 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	YOR114W	Q12219	294 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	RRI1	Q12468	440 aa		3.55	□□□□□ -1.84
MCD4	YKL165C	MDS3	P53094	1487 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	ADK1	P07170	222 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	ARG82	P07250	355 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	NAR1	P23503	491 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	YCR023C	P25351	611 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	YIH1	P25637	258 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	FUB1	P25659	250 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
MCD4	YKL165C	SHG1	P38337	142 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	YAL037W	P39728	267 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	LSM8	P47093	109 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	VPS73	P53142	486 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	ATG21	Q02887	496 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	SEC13	Q04491	297 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	YDR109C	Q04585	715 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	FMP42	Q04991	504 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	BUR2	Q05949	395 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	DUS4	Q06063	367 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	DAP1	Q12091	152 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	RDI1	Q12434	202 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	MRP1	P10662	321 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	ZWF1	P11412	505 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	NUP1	P20676	1076 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	DAL82	P21705	255 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	SAC1	P32368	623 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	KTI12	P34253	313 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	ARA1	P38115	344 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	DHH1	P39517	506 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	HAT2	P39984	401 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	GTS1	P40956	396 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	RPA43	P46669	326 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	PEX31	P53203	462 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	ASI2	P53895	289 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	YMR178W	Q03219	274 aa	Known RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	TMN2	Q04562	672 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	MDM30	Q05930	598 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	SKI7	Q08491	747 aa	Predicted RBP	3.54	□□□□□ -1.84
MCD4	YKL165C	NUS1	Q12063	375 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	YOP1	Q12402	180 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	TY1B-DR4	Q07793	1604 aa		3.54	□□□□□ -1.84
MCD4	YKL165C	CTA1	P15202	515 aa		3.53	□□□□□ -1.84
MCD4	YKL165C	IDP1	P21954	428 aa	Known RBP	3.53	□□□□□ -1.84
MCD4	YKL165C	PMI40	P29952	429 aa	Known RBP	3.53	□□□□□ -1.84
MCD4	YKL165C	RIM1	P32445	135 aa	Known RBP	3.53	□□□□□ -1.84
MCD4	YKL165C	SIP2	P34164	415 aa	Known RBP	3.53	□□□□□ -1.84
MCD4	YKL165C	TRS20	P38334	175 aa		3.53	□□□□□ -1.84
MCD4	YKL165C	YPT35	P38815	214 aa	Known RBP	3.53	□□□□□ -1.84
MCD4	YKL165C	SER33	P40510	469 aa		3.53	□□□□□ -1.84
MCD4	YKL165C	YIL067C	P40514	678 aa		3.53	□□□□□ -1.84
MCD4	YKL165C	CIN2	P46670	268 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms