RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YMR027WQ04371 470 aa3.42□□□□□ -1.86
CTK1YKL139W HMS1Q12398 434 aa3.42□□□□□ -1.86
CTK1YKL139W ERP3Q12403 225 aa3.42□□□□□ -1.86
CTK1YKL139W RSR1P13856 272 aa3.41□□□□□ -1.86
CTK1YKL139W ARO2P28777 376 aaKnown RBP3.41□□□□□ -1.86
CTK1YKL139W YHR035WP38769 630 aa3.41□□□□□ -1.86
CTK1YKL139W AGP3P43548 558 aa3.41□□□□□ -1.86
CTK1YKL139W ATG18P43601 500 aa3.41□□□□□ -1.86
CTK1YKL139W SUR7P54003 302 aa3.41□□□□□ -1.86
CTK1YKL139W SED5Q01590 340 aa3.41□□□□□ -1.86
CTK1YKL139W CMS1Q07897 291 aaKnown RBP3.41□□□□□ -1.86
CTK1YKL139W IRC25Q07951 179 aa3.41□□□□□ -1.86
CTK1YKL139W FDH1Q08911 376 aa3.41□□□□□ -1.86
CTK1YKL139W JID1Q12350 301 aa3.41□□□□□ -1.86
CTK1YKL139W NAG1Q8TGN9 163 aa3.41□□□□□ -1.86
CTK1YKL139W REP1P03871 373 aa3.4□□□□□ -1.87
CTK1YKL139W SPS100P13130 326 aa3.4□□□□□ -1.87
CTK1YKL139W YSR3P23501 404 aa3.4□□□□□ -1.87
CTK1YKL139W MIR1P23641 311 aaKnown RBP3.4□□□□□ -1.87
CTK1YKL139W COY1P34237 679 aa3.4□□□□□ -1.87
CTK1YKL139W LSM12P38828 187 aaKnown RBP3.4□□□□□ -1.87
CTK1YKL139W YGR210CP42942 411 aa3.4□□□□□ -1.87
CTK1YKL139W BOR1P53838 576 aa3.4□□□□□ -1.87
CTK1YKL139W BER1Q06688 274 aaKnown RBP3.4□□□□□ -1.87
CTK1YKL139W YLR012CQ07927 99 aa3.4□□□□□ -1.87
CTK1YKL139W ATP16Q12165 160 aa3.4□□□□□ -1.87
CTK1YKL139W TY3A-GQ12173 290 aa3.4□□□□□ -1.87
CTK1YKL139W MCT1Q12283 360 aa3.4□□□□□ -1.87
CTK1YKL139W TY3A-IQ99219 290 aa3.4□□□□□ -1.87
CTK1YKL139W TDH3P00359 332 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
CTK1YKL139W MOB2P43563 287 aa3.39□□□□□ -1.87
CTK1YKL139W MRX5P47007 382 aa3.39□□□□□ -1.87
CTK1YKL139W YJL118WP47022 219 aa3.39□□□□□ -1.87
CTK1YKL139W GRX3Q03835 250 aa3.39□□□□□ -1.87
CTK1YKL139W FSH2Q05015 223 aa3.39□□□□□ -1.87
CTK1YKL139W GAS2Q06135 555 aa3.39□□□□□ -1.87
CTK1YKL139W YLR173WQ06247 608 aa3.39□□□□□ -1.87
CTK1YKL139W RDL2Q08742 149 aaKnown RBP3.39□□□□□ -1.87
CTK1YKL139W TAF10Q12030 206 aa3.39□□□□□ -1.87
CTK1YKL139W ATP6P00854 259 aa3.38□□□□□ -1.87
CTK1YKL139W RVS161P25343 265 aaKnown RBP3.38□□□□□ -1.87
CTK1YKL139W GCG1P32656 232 aaKnown RBP3.38□□□□□ -1.87
CTK1YKL139W IMP3P32899 183 aaPredicted RBP3.38□□□□□ -1.87
CTK1YKL139W SKG6P32900 734 aaPredicted RBP3.38□□□□□ -1.87
CTK1YKL139W COS9P36034 407 aa3.38□□□□□ -1.87
CTK1YKL139W PMT4P46971 762 aa3.38□□□□□ -1.87
CTK1YKL139W AIM23P47015 356 aa3.38□□□□□ -1.87
CTK1YKL139W YNL134CP53912 376 aaKnown RBP3.38□□□□□ -1.87
CTK1YKL139W SNX41Q04053 625 aa3.38□□□□□ -1.87
CTK1YKL139W COX20Q04935 205 aa3.38□□□□□ -1.87
CTK1YKL139W IZH4Q99393 312 aa3.38□□□□□ -1.87
CTK1YKL139W SSK22P25390 1331 aaPredicted RBP3.38□□□□□ -1.87
CTK1YKL139W RPL31AP0C2H8 113 aaKnown RBP3.38□□□□□ -1.87
CTK1YKL139W CTA1P15202 515 aa3.38□□□□□ -1.87
CTK1YKL139W CPR3P25719 182 aa3.38□□□□□ -1.87
CTK1YKL139W MRPL10P36520 322 aa3.38□□□□□ -1.87
CTK1YKL139W PEX22P39718 180 aa3.38□□□□□ -1.87
CTK1YKL139W OXA1P39952 402 aa3.38□□□□□ -1.87
CTK1YKL139W BIO3P50277 480 aa3.38□□□□□ -1.87
CTK1YKL139W VAC7P53950 1165 aa3.38□□□□□ -1.87
CTK1YKL139W ASR1Q06834 288 aa3.38□□□□□ -1.87
CTK1YKL139W PLP2Q12017 286 aa3.38□□□□□ -1.87
CTK1YKL139W SFM1Q12314 213 aa3.38□□□□□ -1.87
CTK1YKL139W POL30P15873 258 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W HPR1P17629 752 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W GIT1P25346 518 aa3.37□□□□□ -1.87
CTK1YKL139W PRR1P28708 518 aa3.37□□□□□ -1.87
CTK1YKL139W LDS1P31379 325 aa3.37□□□□□ -1.87
CTK1YKL139W BAT1P38891 393 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W AIM10P39965 576 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W YER186CP40101 306 aa3.37□□□□□ -1.87
CTK1YKL139W SHQ1P40486 507 aaPredicted RBP3.37□□□□□ -1.87
CTK1YKL139W LIA1P47120 325 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W PRP38Q00723 242 aaPredicted RBP3.37□□□□□ -1.87
CTK1YKL139W SKI8Q02793 397 aaPredicted RBP3.37□□□□□ -1.87
CTK1YKL139W YPL077CQ02831 240 aa3.37□□□□□ -1.87
CTK1YKL139W GMC2Q06201 188 aa3.37□□□□□ -1.87
CTK1YKL139W CTS2Q06350 511 aa3.37□□□□□ -1.87
CTK1YKL139W GPN3Q06543 272 aa3.37□□□□□ -1.87
CTK1YKL139W RLP24Q07915 199 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W BTS1Q12051 335 aa3.37□□□□□ -1.87
CTK1YKL139W POM33Q12164 279 aa3.37□□□□□ -1.87
CTK1YKL139W UTP23Q12339 254 aaKnown RBP3.37□□□□□ -1.87
CTK1YKL139W CBS2P14905 389 aa3.36□□□□□ -1.87
CTK1YKL139W ERD1P16151 362 aa3.36□□□□□ -1.87
CTK1YKL139W RPL16BP26785 198 aaKnown RBP3.36□□□□□ -1.87
CTK1YKL139W NUP2P32499 720 aa3.36□□□□□ -1.87
CTK1YKL139W PDC2P32896 925 aa3.36□□□□□ -1.87
CTK1YKL139W KTI12P34253 313 aaKnown RBP3.36□□□□□ -1.87
CTK1YKL139W YKL063CP35725 167 aa3.36□□□□□ -1.87
CTK1YKL139W YPC1P38298 316 aa3.36□□□□□ -1.87
CTK1YKL139W TDA11P38854 504 aa3.36□□□□□ -1.87
CTK1YKL139W PRM9P39551 298 aa3.36□□□□□ -1.87
CTK1YKL139W GDS1P41913 522 aa3.36□□□□□ -1.87
CTK1YKL139W KAP114P53067 1004 aa3.36□□□□□ -1.87
CTK1YKL139W CDH1P53197 566 aa3.36□□□□□ -1.87
CTK1YKL139W LSB1P53281 241 aa3.36□□□□□ -1.87
CTK1YKL139W IMP4P53941 290 aaKnown RBP3.36□□□□□ -1.87
CTK1YKL139W SLT2Q00772 484 aa3.36□□□□□ -1.87
CTK1YKL139W ADH2P00331 348 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms