RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W TSC11P40061 1430 aa2.12□□□□□ -2.07
SSF1YHR066W SMC4Q12267 1418 aa2.12□□□□□ -2.07
SSF1YHR066W CBP2P03874 630 aaPredicted RBP2.11□□□□□ -2.07
SSF1YHR066W HEM4P06174 275 aa2.11□□□□□ -2.07
SSF1YHR066W MAS2P11914 482 aa2.11□□□□□ -2.07
SSF1YHR066W SAG1P20840 650 aa2.11□□□□□ -2.07
SSF1YHR066W PDC2P32896 925 aa2.11□□□□□ -2.07
SSF1YHR066W EBP2P36049 427 aaKnown RBP2.11□□□□□ -2.07
SSF1YHR066W SOL2P37262 315 aa2.11□□□□□ -2.07
SSF1YHR066W WSC4P38739 605 aa2.11□□□□□ -2.07
SSF1YHR066W VPS45P38932 577 aa2.11□□□□□ -2.07
SSF1YHR066W MPS2P53159 387 aa2.11□□□□□ -2.07
SSF1YHR066W KTR6P54070 446 aa2.11□□□□□ -2.07
SSF1YHR066W RPL21AQ02753 160 aaKnown RBP2.11□□□□□ -2.07
SSF1YHR066W RRB1Q04225 511 aaKnown RBP2.11□□□□□ -2.07
SSF1YHR066W ATP16Q12165 160 aa2.11□□□□□ -2.07
SSF1YHR066W PFK27Q12471 397 aaPredicted RBP2.11□□□□□ -2.07
SSF1YHR066W RPL21BQ12672 160 aaKnown RBP2.11□□□□□ -2.07
SSF1YHR066W YOR338WQ99326 363 aa2.11□□□□□ -2.07
SSF1YHR066W NUP188P52593 1655 aaKnown RBP2.11□□□□□ -2.07
SSF1YHR066W TY3B-GQ99315 1547 aa2.11□□□□□ -2.07
SSF1YHR066W VPS63O13549 108 aa2.1□□□□□ -2.07
SSF1YHR066W RPL23AP0CX41 137 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W RPL23BP0CX42 137 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W GCD2P12754 651 aaPredicted RBP2.1□□□□□ -2.07
SSF1YHR066W MRPL8P22353 238 aa2.1□□□□□ -2.07
SSF1YHR066W RPL16AP26784 199 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W PSO2P30620 661 aa2.1□□□□□ -2.07
SSF1YHR066W ZUO1P32527 433 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W CHL4P38907 458 aa2.1□□□□□ -2.07
SSF1YHR066W RET3P53600 189 aa2.1□□□□□ -2.07
SSF1YHR066W PRM1P53835 661 aa2.1□□□□□ -2.07
SSF1YHR066W EGD1Q02642 157 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W YDR115WQ04598 105 aa2.1□□□□□ -2.07
SSF1YHR066W CUR1Q06469 252 aa2.1□□□□□ -2.07
SSF1YHR066W MCH1Q07376 486 aa2.1□□□□□ -2.07
SSF1YHR066W YDL109CQ12103 647 aa2.1□□□□□ -2.07
SSF1YHR066W YOR012WQ12351 137 aa2.1□□□□□ -2.07
SSF1YHR066W HMS1Q12398 434 aa2.1□□□□□ -2.07
SSF1YHR066W DET1Q99288 334 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W SNQ2P32568 1501 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W SSN2P38931 1420 aa2.1□□□□□ -2.07
SSF1YHR066W CDC37P06101 506 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W GAL7P08431 366 aa2.1□□□□□ -2.07
SSF1YHR066W RPS16AP0CX51 143 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W RPS16BP0CX52 143 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W UNG1P12887 359 aa2.1□□□□□ -2.07
SSF1YHR066W PUT4P15380 627 aa2.1□□□□□ -2.07
SSF1YHR066W DBR1P24309 405 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W PMT2P31382 759 aa2.1□□□□□ -2.07
SSF1YHR066W VAM7P32912 316 aa2.1□□□□□ -2.07
SSF1YHR066W PTK1P36002 662 aaPredicted RBP2.1□□□□□ -2.07
SSF1YHR066W SMP1P38128 452 aa2.1□□□□□ -2.07
SSF1YHR066W BMT2P38278 337 aa2.1□□□□□ -2.07
SSF1YHR066W MNN9P39107 395 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W SSO2P39926 295 aa2.1□□□□□ -2.07
SSF1YHR066W LYS12P40495 371 aaKnown RBP2.1□□□□□ -2.07
SSF1YHR066W LOC1P43586 204 aaPredicted RBP2.1□□□□□ -2.07
SSF1YHR066W FLC3P53121 802 aa2.1□□□□□ -2.07
SSF1YHR066W ECM18Q04623 453 aa2.1□□□□□ -2.07
SSF1YHR066W RNH1Q04740 348 aa2.1□□□□□ -2.07
SSF1YHR066W FSH2Q05015 223 aa2.1□□□□□ -2.07
SSF1YHR066W STE23Q06010 1027 aa2.1□□□□□ -2.07
SSF1YHR066W SHS1Q07657 551 aa2.1□□□□□ -2.07
SSF1YHR066W IES4Q08561 116 aa2.1□□□□□ -2.07
SSF1YHR066W YIL002W-AQ3E7Z5 69 aa2.1□□□□□ -2.07
SSF1YHR066W STU1P38198 1513 aa2.09□□□□□ -2.07
SSF1YHR066W POL1P13382 1468 aa2.09□□□□□ -2.07
SSF1YHR066W YOR1P53049 1477 aa2.09□□□□□ -2.07
SSF1YHR066W TPI1P00942 248 aaKnown RBP2.09□□□□□ -2.08
SSF1YHR066W PET18P25362 215 aa2.09□□□□□ -2.08
SSF1YHR066W LDS1P31379 325 aa2.09□□□□□ -2.08
SSF1YHR066W MSK1P32048 576 aa2.09□□□□□ -2.08
SSF1YHR066W IME2P32581 645 aa2.09□□□□□ -2.08
SSF1YHR066W PEX22P39718 180 aa2.09□□□□□ -2.08
SSF1YHR066W LCP5P40079 357 aaPredicted RBP2.09□□□□□ -2.08
SSF1YHR066W SEC9P40357 651 aa2.09□□□□□ -2.08
SSF1YHR066W YFR018CP43599 363 aa2.09□□□□□ -2.08
SSF1YHR066W BIO3P50277 480 aa2.09□□□□□ -2.08
SSF1YHR066W RRN5Q02983 363 aa2.09□□□□□ -2.08
SSF1YHR066W YMR010WQ03687 405 aa2.09□□□□□ -2.08
SSF1YHR066W YLR413WQ06689 675 aa2.09□□□□□ -2.08
SSF1YHR066W PEX27Q08580 376 aa2.09□□□□□ -2.08
SSF1YHR066W SLM3Q12093 417 aa2.09□□□□□ -2.08
SSF1YHR066W TIR4Q12218 487 aaPredicted RBP2.09□□□□□ -2.08
SSF1YHR066W RAX2Q12465 1220 aa2.09□□□□□ -2.08
SSF1YHR066W RPS14AP06367 137 aaKnown RBP2.08□□□□□ -2.08
SSF1YHR066W GAL3P13045 520 aa2.08□□□□□ -2.08
SSF1YHR066W THR4P16120 514 aaKnown RBP2.08□□□□□ -2.08
SSF1YHR066W FAR1P21268 830 aa2.08□□□□□ -2.08
SSF1YHR066W SHE1P38200 338 aa2.08□□□□□ -2.08
SSF1YHR066W SMC2P38989 1170 aaKnown RBP2.08□□□□□ -2.08
SSF1YHR066W RPS14BP39516 138 aaKnown RBP2.08□□□□□ -2.08
SSF1YHR066W AIM20P40451 204 aa2.08□□□□□ -2.08
SSF1YHR066W YFL012WP43580 148 aa2.08□□□□□ -2.08
SSF1YHR066W CDH1P53197 566 aa2.08□□□□□ -2.08
SSF1YHR066W YGR015CP53208 328 aa2.08□□□□□ -2.08
SSF1YHR066W YGR266WP53326 701 aa2.08□□□□□ -2.08
SSF1YHR066W AIM33Q04516 312 aa2.08□□□□□ -2.08
SSF1YHR066W KAP95Q06142 861 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms