RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W SPO19Q03029 223 aa1.8□□□□□ -2.12
SMD1YGR074W BCP1Q06338 283 aa1.8□□□□□ -2.12
SMD1YGR074W PBP4Q07362 185 aaKnown RBP1.8□□□□□ -2.12
SMD1YGR074W MCH1Q07376 486 aa1.8□□□□□ -2.12
SMD1YGR074W DTD1Q07648 150 aaKnown RBP1.8□□□□□ -2.12
SMD1YGR074W YPQ1Q12010 308 aa1.8□□□□□ -2.12
SMD1YGR074W ATP16Q12165 160 aa1.8□□□□□ -2.12
SMD1YGR074W FRE8Q12209 686 aa1.8□□□□□ -2.12
SMD1YGR074W ERP3Q12403 225 aa1.8□□□□□ -2.12
SMD1YGR074W RPL21BQ12672 160 aaKnown RBP1.8□□□□□ -2.12
SMD1YGR074W IZH4Q99393 312 aa1.8□□□□□ -2.12
SMD1YGR074W MSS116P15424 664 aaKnown RBP1.79□□□□□ -2.12
SMD1YGR074W CMK2P22517 447 aa1.79□□□□□ -2.12
SMD1YGR074W SWD3P38123 315 aa1.79□□□□□ -2.12
SMD1YGR074W RCK2P38623 610 aa1.79□□□□□ -2.12
SMD1YGR074W YHR035WP38769 630 aa1.79□□□□□ -2.12
SMD1YGR074W BAT1P38891 393 aaKnown RBP1.79□□□□□ -2.12
SMD1YGR074W TIM17P39515 158 aa1.79□□□□□ -2.12
SMD1YGR074W DSE1P40077 573 aa1.79□□□□□ -2.12
SMD1YGR074W INA22P40576 216 aa1.79□□□□□ -2.12
SMD1YGR074W STB1P42845 420 aa1.79□□□□□ -2.12
SMD1YGR074W YFL040WP43562 540 aa1.79□□□□□ -2.12
SMD1YGR074W MRX5P47007 382 aa1.79□□□□□ -2.12
SMD1YGR074W GTO1P48239 356 aa1.79□□□□□ -2.12
SMD1YGR074W LSG1P53145 640 aaKnown RBP1.79□□□□□ -2.12
SMD1YGR074W CDH1P53197 566 aa1.79□□□□□ -2.12
SMD1YGR074W MKC7P53379 596 aa1.79□□□□□ -2.12
SMD1YGR074W YNL260CP53846 198 aa1.79□□□□□ -2.12
SMD1YGR074W YNL050CP53952 270 aa1.79□□□□□ -2.12
SMD1YGR074W YPL080CQ02826 108 aa1.79□□□□□ -2.12
SMD1YGR074W ENT5Q03769 411 aaKnown RBP1.79□□□□□ -2.12
SMD1YGR074W UBX2Q04228 584 aa1.79□□□□□ -2.12
SMD1YGR074W YDR115WQ04598 105 aa1.79□□□□□ -2.12
SMD1YGR074W ERV41Q04651 352 aa1.79□□□□□ -2.12
SMD1YGR074W YHC1Q05900 231 aaKnown RBP1.79□□□□□ -2.12
SMD1YGR074W YLR177WQ06251 628 aa1.79□□□□□ -2.12
SMD1YGR074W MFG1Q07684 458 aa1.79□□□□□ -2.12
SMD1YGR074W RRP42Q12277 265 aaPredicted RBP1.79□□□□□ -2.12
SMD1YGR074W UTP23Q12339 254 aaKnown RBP1.79□□□□□ -2.12
SMD1YGR074W TFC7Q12415 435 aa1.79□□□□□ -2.12
SMD1YGR074W MHP1P43638 1398 aa1.79□□□□□ -2.12
SMD1YGR074W PRB1P09232 635 aa1.78□□□□□ -2.12
SMD1YGR074W SSA3P09435 649 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W REV1P12689 985 aa1.78□□□□□ -2.12
SMD1YGR074W UNG1P12887 359 aa1.78□□□□□ -2.12
SMD1YGR074W VPS1P21576 704 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W CHA1P25379 360 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W RPL16BP26785 198 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W INO2P26798 304 aa1.78□□□□□ -2.12
SMD1YGR074W HXT1P32465 570 aa1.78□□□□□ -2.12
SMD1YGR074W PPQ1P32945 549 aa1.78□□□□□ -2.12
SMD1YGR074W RIB7P33312 244 aa1.78□□□□□ -2.12
SMD1YGR074W YKL070WP36087 169 aa1.78□□□□□ -2.12
SMD1YGR074W MRPL37P36532 105 aa1.78□□□□□ -2.12
SMD1YGR074W HIS2P38635 335 aa1.78□□□□□ -2.12
SMD1YGR074W YCH1P42937 148 aa1.78□□□□□ -2.12
SMD1YGR074W LOC1P43586 204 aaPredicted RBP1.78□□□□□ -2.12
SMD1YGR074W SEH1P53011 349 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W MND1P53102 219 aa1.78□□□□□ -2.12
SMD1YGR074W YGL039WP53183 348 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W OKP1P53298 406 aa1.78□□□□□ -2.12
SMD1YGR074W MPP6P53725 186 aaPredicted RBP1.78□□□□□ -2.12
SMD1YGR074W SUR7P54003 302 aa1.78□□□□□ -2.12
SMD1YGR074W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SMD1YGR074W SNX41Q04053 625 aa1.78□□□□□ -2.12
SMD1YGR074W GPN3Q06543 272 aa1.78□□□□□ -2.12
SMD1YGR074W MRX9Q07349 420 aaKnown RBP1.78□□□□□ -2.12
SMD1YGR074W PSK1P31374 1356 aa1.77□□□□□ -2.13
SMD1YGR074W COX4P04037 155 aa1.77□□□□□ -2.13
SMD1YGR074W RPL24AP04449 155 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W RPS14AP06367 137 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W BGL2P15703 313 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W ISY1P21374 235 aaPredicted RBP1.77□□□□□ -2.13
SMD1YGR074W GPI12P23797 304 aa1.77□□□□□ -2.13
SMD1YGR074W PMT2P31382 759 aa1.77□□□□□ -2.13
SMD1YGR074W ECT1P33412 323 aa1.77□□□□□ -2.13
SMD1YGR074W EFM1P38732 585 aa1.77□□□□□ -2.13
SMD1YGR074W SMF2P38778 549 aa1.77□□□□□ -2.13
SMD1YGR074W RPS14BP39516 138 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W PRE5P40302 234 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W YIA6P40556 373 aa1.77□□□□□ -2.13
SMD1YGR074W CDC40P40968 455 aaPredicted RBP1.77□□□□□ -2.13
SMD1YGR074W BIO3P50277 480 aa1.77□□□□□ -2.13
SMD1YGR074W VEL1P53058 206 aa1.77□□□□□ -2.13
SMD1YGR074W SWC4P53201 476 aa1.77□□□□□ -2.13
SMD1YGR074W VAC7P53950 1165 aa1.77□□□□□ -2.13
SMD1YGR074W SED5Q01590 340 aa1.77□□□□□ -2.13
SMD1YGR074W HAL1Q01766 294 aa1.77□□□□□ -2.13
SMD1YGR074W BER1Q06688 274 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W RDL2Q08742 149 aaKnown RBP1.77□□□□□ -2.13
SMD1YGR074W SRO7Q12038 1033 aa1.77□□□□□ -2.13
SMD1YGR074W RBD2Q12270 262 aa1.77□□□□□ -2.13
SMD1YGR074W PRM4Q12498 284 aa1.77□□□□□ -2.13
SMD1YGR074W ILV1P00927 576 aaKnown RBP1.76□□□□□ -2.13
SMD1YGR074W REP1P03871 373 aa1.76□□□□□ -2.13
SMD1YGR074W DAL5P15365 543 aa1.76□□□□□ -2.13
SMD1YGR074W EPT1P22140 391 aa1.76□□□□□ -2.13
SMD1YGR074W MEK1P24719 497 aaPredicted RBP1.76□□□□□ -2.13
SMD1YGR074W IFM1P25038 676 aa1.76□□□□□ -2.13
SMD1YGR074W LDB16P25587 256 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 154.3 ms