RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W DBR1P24309 405 aaKnown RBP1.97□□□□□ -2.09
NIC96YFR002W MRPL37P36532 105 aa1.97□□□□□ -2.09
NIC96YFR002W SPT8P38915 602 aa1.97□□□□□ -2.09
NIC96YFR002W END3P39013 349 aa1.97□□□□□ -2.09
NIC96YFR002W CDC40P40968 455 aaPredicted RBP1.97□□□□□ -2.09
NIC96YFR002W GTO1P48239 356 aa1.97□□□□□ -2.09
NIC96YFR002W LSB1P53281 241 aa1.97□□□□□ -2.09
NIC96YFR002W MLP1Q02455 1875 aaKnown RBP1.97□□□□□ -2.09
NIC96YFR002W YMR310CQ04867 317 aaPredicted RBP1.97□□□□□ -2.09
NIC96YFR002W IZH2Q12442 317 aa1.97□□□□□ -2.09
NIC96YFR002W STE2D6VTK4 431 aa1.97□□□□□ -2.09
NIC96YFR002W DST1P07273 309 aa1.97□□□□□ -2.09
NIC96YFR002W MSS116P15424 664 aaKnown RBP1.97□□□□□ -2.09
NIC96YFR002W MEK1P24719 497 aaPredicted RBP1.97□□□□□ -2.09
NIC96YFR002W YPS1P32329 569 aa1.97□□□□□ -2.09
NIC96YFR002W BFR1P38934 470 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
NIC96YFR002W LCP5P40079 357 aaPredicted RBP1.97□□□□□ -2.09
NIC96YFR002W ATM1P40416 690 aa1.97□□□□□ -2.09
NIC96YFR002W TOS3P43637 560 aa1.97□□□□□ -2.09
NIC96YFR002W BIO3P50277 480 aa1.97□□□□□ -2.09
NIC96YFR002W MND1P53102 219 aa1.97□□□□□ -2.09
NIC96YFR002W YGL114WP53134 725 aa1.97□□□□□ -2.09
NIC96YFR002W LIF1P53150 421 aa1.97□□□□□ -2.09
NIC96YFR002W RET3P53600 189 aa1.97□□□□□ -2.09
NIC96YFR002W CSI1Q04368 295 aa1.97□□□□□ -2.09
NIC96YFR002W YLL007CQ07799 665 aa1.97□□□□□ -2.09
NIC96YFR002W AAD15Q08361 143 aa1.97□□□□□ -2.09
NIC96YFR002W ATG34Q12292 412 aa1.97□□□□□ -2.09
NIC96YFR002W PAA1Q12447 191 aaKnown RBP1.97□□□□□ -2.09
NIC96YFR002W CAR2P07991 424 aaKnown RBP1.96□□□□□ -2.09
NIC96YFR002W HMX1P32339 317 aa1.96□□□□□ -2.09
NIC96YFR002W YPT35P38815 214 aaKnown RBP1.96□□□□□ -2.09
NIC96YFR002W PEX18P38855 283 aa1.96□□□□□ -2.09
NIC96YFR002W PRP39P39682 629 aaKnown RBP1.96□□□□□ -2.09
NIC96YFR002W MIG3P39943 394 aa1.96□□□□□ -2.09
NIC96YFR002W YHC3P47040 408 aa1.96□□□□□ -2.09
NIC96YFR002W MPP6P53725 186 aaPredicted RBP1.96□□□□□ -2.09
NIC96YFR002W YNL146WP53906 100 aa1.96□□□□□ -2.09
NIC96YFR002W ARV1Q06541 321 aa1.96□□□□□ -2.09
NIC96YFR002W ARR1Q06596 294 aa1.96□□□□□ -2.09
NIC96YFR002W APC5Q08683 685 aa1.96□□□□□ -2.09
NIC96YFR002W YDR262WQ12331 272 aa1.96□□□□□ -2.09
NIC96YFR002W MOT1P32333 1867 aa1.96□□□□□ -2.1
NIC96YFR002W SSA3P09435 649 aaKnown RBP1.96□□□□□ -2.1
NIC96YFR002W MSK1P32048 576 aa1.96□□□□□ -2.1
NIC96YFR002W ZUO1P32527 433 aaKnown RBP1.96□□□□□ -2.1
NIC96YFR002W TOA2P32774 122 aa1.96□□□□□ -2.1
NIC96YFR002W COT1P32798 439 aa1.96□□□□□ -2.1
NIC96YFR002W SFH5P47008 294 aa1.96□□□□□ -2.1
NIC96YFR002W VOA1P53262 265 aa1.96□□□□□ -2.1
NIC96YFR002W MMT1Q03218 510 aa1.96□□□□□ -2.1
NIC96YFR002W AIM33Q04516 312 aa1.96□□□□□ -2.1
NIC96YFR002W DCP1Q12517 231 aaPredicted RBP1.96□□□□□ -2.1
NIC96YFR002W FSH3Q99369 266 aa1.96□□□□□ -2.1
NIC96YFR002W TEL1P38110 2787 aa1.96□□□□□ -2.1
NIC96YFR002W RNA1P11745 407 aaKnown RBP1.95□□□□□ -2.1
NIC96YFR002W RAD23P32628 398 aaKnown RBP1.95□□□□□ -2.1
NIC96YFR002W SKN1P33336 771 aa1.95□□□□□ -2.1
NIC96YFR002W YBL028CP38202 106 aa1.95□□□□□ -2.1
NIC96YFR002W SBE22P38814 852 aa1.95□□□□□ -2.1
NIC96YFR002W SIM1P40472 476 aa1.95□□□□□ -2.1
NIC96YFR002W NUP116Q02630 1113 aa1.95□□□□□ -2.1
NIC96YFR002W ASA1Q06822 443 aa1.95□□□□□ -2.1
NIC96YFR002W FMP16Q12497 93 aa1.95□□□□□ -2.1
NIC96YFR002W SWI1P09547 1314 aa1.95□□□□□ -2.1
NIC96YFR002W TOR2P32600 2474 aaKnown RBP1.95□□□□□ -2.1
NIC96YFR002W CKI1P20485 582 aa1.95□□□□□ -2.1
NIC96YFR002W RTC2P38279 296 aa1.95□□□□□ -2.1
NIC96YFR002W MOB1P40484 314 aa1.95□□□□□ -2.1
NIC96YFR002W SNL1P40548 159 aa1.95□□□□□ -2.1
NIC96YFR002W STE24P47154 453 aa1.95□□□□□ -2.1
NIC96YFR002W BOP2Q06150 570 aa1.95□□□□□ -2.1
NIC96YFR002W RPL18AP0CX49 186 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W RPL18BP0CX50 186 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W NAM2P11325 894 aa1.94□□□□□ -2.1
NIC96YFR002W CSE1P33307 960 aa1.94□□□□□ -2.1
NIC96YFR002W SPT10P35208 640 aa1.94□□□□□ -2.1
NIC96YFR002W MID2P36027 376 aa1.94□□□□□ -2.1
NIC96YFR002W IML3P38265 245 aa1.94□□□□□ -2.1
NIC96YFR002W FET3P38993 636 aa1.94□□□□□ -2.1
NIC96YFR002W PTI1P39927 425 aaPredicted RBP1.94□□□□□ -2.1
NIC96YFR002W FMP33P46998 180 aa1.94□□□□□ -2.1
NIC96YFR002W RRN9P53437 365 aa1.94□□□□□ -2.1
NIC96YFR002W YNL134CP53912 376 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W MTQ1P53944 314 aa1.94□□□□□ -2.1
NIC96YFR002W CWC21Q03375 135 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W SMP3Q04174 516 aa1.94□□□□□ -2.1
NIC96YFR002W APC4Q04601 652 aa1.94□□□□□ -2.1
NIC96YFR002W LDS2Q08218 356 aa1.94□□□□□ -2.1
NIC96YFR002W RUD3Q12234 484 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W RIF1P29539 1916 aa1.94□□□□□ -2.1
NIC96YFR002W SLM5P25345 492 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W CIN8P27895 1000 aa1.94□□□□□ -2.1
NIC96YFR002W NTG1P31378 399 aa1.94□□□□□ -2.1
NIC96YFR002W PHA2P32452 334 aa1.94□□□□□ -2.1
NIC96YFR002W YKL162CP36052 402 aa1.94□□□□□ -2.1
NIC96YFR002W PEX32P38292 413 aa1.94□□□□□ -2.1
NIC96YFR002W LYS12P40495 371 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W EMC2P47133 292 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W TIM21P53220 239 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms