RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	VMA5	P31412	392 aa	Known RBP	2.8	□□□□□ -1.96
LSM4	YER112W	ACB1	P31787	87 aa		2.8	□□□□□ -1.96
LSM4	YER112W	SRB2	P34162	210 aa		2.8	□□□□□ -1.96
LSM4	YER112W	MMS21	P38632	267 aa		2.8	□□□□□ -1.96
LSM4	YER112W	HIT1	P46973	164 aa		2.8	□□□□□ -1.96
LSM4	YER112W	COQ5	P49017	307 aa		2.8	□□□□□ -1.96
LSM4	YER112W	TAF6	P53040	516 aa		2.8	□□□□□ -1.96
LSM4	YER112W	API2	Q04413	109 aa		2.8	□□□□□ -1.96
LSM4	YER112W	BUR2	Q05949	395 aa		2.8	□□□□□ -1.96
LSM4	YER112W	PIN3	Q06449	215 aa		2.8	□□□□□ -1.96
LSM4	YER112W	IES4	Q08561	116 aa		2.8	□□□□□ -1.96
LSM4	YER112W	KRR1	P25586	316 aa	Predicted RBP	2.79	□□□□□ -1.96
LSM4	YER112W	ITR2	P30606	609 aa		2.79	□□□□□ -1.96
LSM4	YER112W	ZIP1	P31111	875 aa		2.79	□□□□□ -1.96
LSM4	YER112W	RAD23	P32628	398 aa	Known RBP	2.79	□□□□□ -1.96
LSM4	YER112W	DTR1	P38125	572 aa		2.79	□□□□□ -1.96
LSM4	YER112W	SMP1	P38128	452 aa		2.79	□□□□□ -1.96
LSM4	YER112W	RRT13	P40042	185 aa		2.79	□□□□□ -1.96
LSM4	YER112W	YGR067C	P53243	804 aa		2.79	□□□□□ -1.96
LSM4	YER112W	RNY1	Q02933	434 aa	Known RBP	2.79	□□□□□ -1.96
LSM4	YER112W	SPH1	Q06160	661 aa		2.79	□□□□□ -1.96
LSM4	YER112W	RPN6	Q12377	434 aa		2.79	□□□□□ -1.96
LSM4	YER112W	VPS63	O13549	108 aa		2.78	□□□□□ -1.96
LSM4	YER112W	GAL3	P13045	520 aa		2.78	□□□□□ -1.96
LSM4	YER112W	MEI5	P32489	222 aa		2.78	□□□□□ -1.96
LSM4	YER112W	TIP20	P33891	701 aa		2.78	□□□□□ -1.96
LSM4	YER112W	YFR018C	P43599	363 aa		2.78	□□□□□ -1.96
LSM4	YER112W	PXR1	P53335	271 aa	Predicted RBP	2.78	□□□□□ -1.96
LSM4	YER112W	FAR10	Q06001	478 aa		2.78	□□□□□ -1.96
LSM4	YER112W	DTD1	Q07648	150 aa	Known RBP	2.78	□□□□□ -1.96
LSM4	YER112W	TAF10	Q12030	206 aa		2.78	□□□□□ -1.96
LSM4	YER112W	TIR4	Q12218	487 aa	Predicted RBP	2.78	□□□□□ -1.96
LSM4	YER112W	MHP1	P43638	1398 aa		2.77	□□□□□ -1.97
LSM4	YER112W	CDC37	P06101	506 aa	Known RBP	2.77	□□□□□ -1.97
LSM4	YER112W	KTI12	P34253	313 aa	Known RBP	2.77	□□□□□ -1.97
LSM4	YER112W	YGR168C	P53293	376 aa		2.77	□□□□□ -1.97
LSM4	YER112W	SCS7	Q03529	384 aa		2.77	□□□□□ -1.97
LSM4	YER112W	SLF1	Q12034	447 aa	Known RBP	2.77	□□□□□ -1.97
LSM4	YER112W	YOL085C	Q99345	113 aa		2.77	□□□□□ -1.97
LSM4	YER112W	FAB1	P34756	2278 aa		2.76	□□□□□ -1.97
LSM4	YER112W	STF1	P01098	86 aa		2.76	□□□□□ -1.97
LSM4	YER112W	CKA2	P19454	339 aa		2.76	□□□□□ -1.97
LSM4	YER112W	PET18	P25362	215 aa		2.76	□□□□□ -1.97
LSM4	YER112W	MRX8	Q05473	314 aa		2.76	□□□□□ -1.97
LSM4	YER112W	YOL029C	Q08187	201 aa		2.76	□□□□□ -1.97
LSM4	YER112W	PRM4	Q12498	284 aa		2.76	□□□□□ -1.97
LSM4	YER112W	YAL067W-A	Q8TGK6	75 aa		2.76	□□□□□ -1.97
LSM4	YER112W	AUS1	Q08409	1394 aa		2.75	□□□□□ -1.97
LSM4	YER112W	REP1	P03871	373 aa		2.75	□□□□□ -1.97
LSM4	YER112W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
LSM4	YER112W	TAE1	P38340	232 aa		2.75	□□□□□ -1.97
LSM4	YER112W	SMF2	P38778	549 aa		2.75	□□□□□ -1.97
LSM4	YER112W	POP2	P39008	433 aa		2.75	□□□□□ -1.97
LSM4	YER112W	FHL1	P39521	936 aa		2.75	□□□□□ -1.97
LSM4	YER112W	FRT2	P39734	528 aa		2.75	□□□□□ -1.97
LSM4	YER112W	SSO2	P39926	295 aa		2.75	□□□□□ -1.97
LSM4	YER112W	UFE1	P41834	346 aa		2.75	□□□□□ -1.97
LSM4	YER112W	UTP15	Q04305	513 aa	Known RBP	2.75	□□□□□ -1.97
LSM4	YER112W	APC4	Q04601	652 aa		2.75	□□□□□ -1.97
LSM4	YER112W	YLR297W	Q05899	129 aa		2.75	□□□□□ -1.97
LSM4	YER112W	MRX9	Q07349	420 aa	Known RBP	2.75	□□□□□ -1.97
LSM4	YER112W	RDL2	Q08742	149 aa	Known RBP	2.75	□□□□□ -1.97
LSM4	YER112W	RTC5	Q12108	567 aa	Known RBP	2.75	□□□□□ -1.97
LSM4	YER112W	CTM1	P38818	585 aa		2.74	□□□□□ -1.97
LSM4	YER112W	UTP25	P40498	721 aa	Known RBP	2.74	□□□□□ -1.97
LSM4	YER112W	INA22	P40576	216 aa		2.74	□□□□□ -1.97
LSM4	YER112W	RPL18A	P0CX49	186 aa	Known RBP	2.73	□□□□□ -1.97
LSM4	YER112W	RPL18B	P0CX50	186 aa	Known RBP	2.73	□□□□□ -1.97
LSM4	YER112W	YPS1	P32329	569 aa		2.73	□□□□□ -1.97
LSM4	YER112W	YKL187C	P34231	750 aa		2.73	□□□□□ -1.97
LSM4	YER112W	DBP7	P36120	742 aa	Known RBP	2.73	□□□□□ -1.97
LSM4	YER112W	END3	P39013	349 aa		2.73	□□□□□ -1.97
LSM4	YER112W	YIR035C	P40579	254 aa		2.73	□□□□□ -1.97
LSM4	YER112W	PMT4	P46971	762 aa		2.73	□□□□□ -1.97
LSM4	YER112W	VPS20	Q04272	221 aa		2.73	□□□□□ -1.97
LSM4	YER112W	STE23	Q06010	1027 aa		2.73	□□□□□ -1.97
LSM4	YER112W	YLR012C	Q07927	99 aa		2.73	□□□□□ -1.97
LSM4	YER112W	YDR018C	Q12185	396 aa		2.73	□□□□□ -1.97
LSM4	YER112W	FLO11	P08640	1367 aa		2.73	□□□□□ -1.97
LSM4	YER112W	FUS3	P16892	353 aa	Known RBP	2.72	□□□□□ -1.97
LSM4	YER112W	TPS2	P31688	896 aa	Known RBP	2.72	□□□□□ -1.97
LSM4	YER112W	SUR1	P33300	382 aa		2.72	□□□□□ -1.97
LSM4	YER112W	RFT1	P38206	574 aa	Predicted RBP	2.72	□□□□□ -1.97
LSM4	YER112W	TRR2	P38816	342 aa		2.72	□□□□□ -1.97
LSM4	YER112W	YDR089W	P38966	869 aa		2.72	□□□□□ -1.97
LSM4	YER112W	AIM20	P40451	204 aa		2.72	□□□□□ -1.97
LSM4	YER112W	MIC19	P43594	170 aa		2.72	□□□□□ -1.97
LSM4	YER112W	IRC4	Q03036	179 aa		2.72	□□□□□ -1.97
LSM4	YER112W	CAB5	Q03941	241 aa		2.72	□□□□□ -1.97
LSM4	YER112W	GMC1	Q04399	608 aa		2.72	□□□□□ -1.97
LSM4	YER112W	REX3	Q12090	404 aa		2.72	□□□□□ -1.97
LSM4	YER112W	YPL245W	Q12179	454 aa	Known RBP	2.72	□□□□□ -1.97
LSM4	YER112W	CBP2	P03874	630 aa	Predicted RBP	2.71	□□□□□ -1.98
LSM4	YER112W	GCD2	P12754	651 aa	Predicted RBP	2.71	□□□□□ -1.98
LSM4	YER112W	BUD2	P33314	1104 aa		2.71	□□□□□ -1.98
LSM4	YER112W	SWC5	P38326	303 aa		2.71	□□□□□ -1.98
LSM4	YER112W	YIL054W	P40524	105 aa		2.71	□□□□□ -1.98
LSM4	YER112W	SDS23	P53172	527 aa		2.71	□□□□□ -1.98
LSM4	YER112W	TPC1	P53257	314 aa		2.71	□□□□□ -1.98
LSM4	YER112W	INP1	Q03694	420 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms