RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	RAD5	P32849	1169 aa	Predicted RBP	1.66	□□□□□ -2.14
DOT6	YER088C	GEP4	P38812	185 aa		1.66	□□□□□ -2.14
DOT6	YER088C	FIS1	P40515	155 aa		1.66	□□□□□ -2.14
DOT6	YER088C	DFG10	P40526	253 aa		1.66	□□□□□ -2.14
DOT6	YER088C	CTK3	P46963	296 aa	Predicted RBP	1.66	□□□□□ -2.14
DOT6	YER088C	YJL055W	P47044	245 aa		1.66	□□□□□ -2.14
DOT6	YER088C	SEH1	P53011	349 aa	Known RBP	1.66	□□□□□ -2.14
DOT6	YER088C	GAT3	Q07928	141 aa		1.66	□□□□□ -2.14
DOT6	YER088C	SKS1	Q12505	502 aa		1.66	□□□□□ -2.14
DOT6	YER088C	SFG1	Q12507	346 aa		1.66	□□□□□ -2.14
DOT6	YER088C	POL2	P21951	2222 aa	Known RBP	1.65	□□□□□ -2.14
DOT6	YER088C	ADH1	P00330	348 aa	Known RBP	1.65	□□□□□ -2.15
DOT6	YER088C	MAS1	P10507	462 aa		1.65	□□□□□ -2.15
DOT6	YER088C	MSP1	P28737	362 aa		1.65	□□□□□ -2.15
DOT6	YER088C	DOA1	P36037	715 aa		1.65	□□□□□ -2.15
DOT6	YER088C	YSW1	P38280	609 aa		1.65	□□□□□ -2.15
DOT6	YER088C	TIM17	P39515	158 aa		1.65	□□□□□ -2.15
DOT6	YER088C	SEO1	P39709	593 aa		1.65	□□□□□ -2.15
DOT6	YER088C	GDI1	P39958	451 aa	Known RBP	1.65	□□□□□ -2.15
DOT6	YER088C	SEC28	P40509	296 aa	Known RBP	1.65	□□□□□ -2.15
DOT6	YER088C	MRPS16	Q02608	121 aa		1.65	□□□□□ -2.15
DOT6	YER088C	LIP2	Q06005	328 aa		1.65	□□□□□ -2.15
DOT6	YER088C	SRN2	Q99176	213 aa		1.65	□□□□□ -2.15
DOT6	YER088C	CSF1	Q12150	2958 aa		1.65	□□□□□ -2.15
DOT6	YER088C	HSP82	P02829	709 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	TCP1	P12612	559 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	SKG6	P32900	734 aa	Predicted RBP	1.64	□□□□□ -2.15
DOT6	YER088C	MRPL27	P36526	146 aa	Predicted RBP	1.64	□□□□□ -2.15
DOT6	YER088C	JEM1	P40358	645 aa		1.64	□□□□□ -2.15
DOT6	YER088C	VAC7	P53950	1165 aa		1.64	□□□□□ -2.15
DOT6	YER088C	SXM1	Q04175	944 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	MEC1	P38111	2368 aa		1.64	□□□□□ -2.15
DOT6	YER088C	HFA1	P32874	2273 aa		1.64	□□□□□ -2.15
DOT6	YER088C	CBP6	P07253	162 aa	Predicted RBP	1.64	□□□□□ -2.15
DOT6	YER088C	RPS16A	P0CX51	143 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	RPS16B	P0CX52	143 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	ZRC1	P20107	442 aa		1.64	□□□□□ -2.15
DOT6	YER088C	PSO2	P30620	661 aa		1.64	□□□□□ -2.15
DOT6	YER088C	FAA1	P30624	700 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	COT1	P32798	439 aa		1.64	□□□□□ -2.15
DOT6	YER088C	LCP5	P40079	357 aa	Predicted RBP	1.64	□□□□□ -2.15
DOT6	YER088C	YNL208W	P40159	199 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	SEC27	P41811	889 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	FYV8	P46949	817 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	NUP84	P52891	726 aa		1.64	□□□□□ -2.15
DOT6	YER088C	YPS5	P53057	165 aa		1.64	□□□□□ -2.15
DOT6	YER088C	YGR266W	P53326	701 aa		1.64	□□□□□ -2.15
DOT6	YER088C	RET3	P53600	189 aa		1.64	□□□□□ -2.15
DOT6	YER088C	ALG11	P53954	548 aa	Known RBP	1.64	□□□□□ -2.15
DOT6	YER088C	PIN3	Q06449	215 aa		1.64	□□□□□ -2.15
DOT6	YER088C	YFH1	Q07540	174 aa		1.64	□□□□□ -2.15
DOT6	YER088C	YOR376W	Q08900	122 aa		1.64	□□□□□ -2.15
DOT6	YER088C	PCL9	Q12477	304 aa		1.64	□□□□□ -2.15
DOT6	YER088C	RPS18A	P0CX55	146 aa	Known RBP	1.63	□□□□□ -2.15
DOT6	YER088C	RPS18B	P0CX56	146 aa	Predicted RBP	1.63	□□□□□ -2.15
DOT6	YER088C	TPM1	P17536	199 aa	Known RBP	1.63	□□□□□ -2.15
DOT6	YER088C	GIT1	P25346	518 aa		1.63	□□□□□ -2.15
DOT6	YER088C	DEP1	P31385	405 aa		1.63	□□□□□ -2.15
DOT6	YER088C	SWI3	P32591	825 aa		1.63	□□□□□ -2.15
DOT6	YER088C	VAM7	P32912	316 aa		1.63	□□□□□ -2.15
DOT6	YER088C	ADH5	P38113	351 aa	Known RBP	1.63	□□□□□ -2.15
DOT6	YER088C	KAP104	P38217	918 aa	Known RBP	1.63	□□□□□ -2.15
DOT6	YER088C	MED6	P38782	295 aa		1.63	□□□□□ -2.15
DOT6	YER088C	LSM12	P38828	187 aa	Known RBP	1.63	□□□□□ -2.15
DOT6	YER088C	PFS1	P38872	237 aa		1.63	□□□□□ -2.15
DOT6	YER088C	GAA1	P39012	614 aa		1.63	□□□□□ -2.15
DOT6	YER088C	BTT1	P40314	149 aa	Predicted RBP	1.63	□□□□□ -2.15
DOT6	YER088C	VHT1	P53241	593 aa		1.63	□□□□□ -2.15
DOT6	YER088C	TRM112	P53738	135 aa	Predicted RBP	1.63	□□□□□ -2.15
DOT6	YER088C	RCF1	Q03713	159 aa		1.63	□□□□□ -2.15
DOT6	YER088C	FUS2	Q05670	677 aa		1.63	□□□□□ -2.15
DOT6	YER088C	IES4	Q08561	116 aa		1.63	□□□□□ -2.15
DOT6	YER088C	SFM1	Q12314	213 aa		1.63	□□□□□ -2.15
DOT6	YER088C	AIM45	Q12480	344 aa	Known RBP	1.63	□□□□□ -2.15
DOT6	YER088C	YBL111C	Q3E7Y5	667 aa		1.63	□□□□□ -2.15
DOT6	YER088C	ILV1	P00927	576 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	SCH9	P11792	824 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	FAR1	P21268	830 aa		1.62	□□□□□ -2.15
DOT6	YER088C	ECT1	P33412	323 aa		1.62	□□□□□ -2.15
DOT6	YER088C	MID2	P36027	376 aa		1.62	□□□□□ -2.15
DOT6	YER088C	OPY1	P38271	328 aa		1.62	□□□□□ -2.15
DOT6	YER088C	WSC4	P38739	605 aa		1.62	□□□□□ -2.15
DOT6	YER088C	OSW5	P40219	148 aa		1.62	□□□□□ -2.15
DOT6	YER088C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.62	□□□□□ -2.15	not detected
DOT6	YER088C	YNL146W	P53906	100 aa		1.62	□□□□□ -2.15
DOT6	YER088C	PRP38	Q00723	242 aa	Predicted RBP	1.62	□□□□□ -2.15
DOT6	YER088C	UTP6	Q02354	440 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	YPL107W	Q02873	248 aa		1.62	□□□□□ -2.15
DOT6	YER088C	CSM3	Q04659	317 aa		1.62	□□□□□ -2.15
DOT6	YER088C	YLH47	Q06493	454 aa		1.62	□□□□□ -2.15
DOT6	YER088C	YPL278C	Q08990	100 aa		1.62	□□□□□ -2.15
DOT6	YER088C	YPQ1	Q12010	308 aa		1.62	□□□□□ -2.15
DOT6	YER088C	YOR338W	Q99326	363 aa		1.62	□□□□□ -2.15
DOT6	YER088C	VPS3	P23643	1011 aa		1.62	□□□□□ -2.15
DOT6	YER088C	DBR1	P24309	405 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	IES6	P32617	166 aa		1.62	□□□□□ -2.15
DOT6	YER088C	TOA1	P32773	286 aa		1.62	□□□□□ -2.15
DOT6	YER088C	KDX1	P36005	433 aa		1.62	□□□□□ -2.15
DOT6	YER088C	ECM8	P38246	354 aa		1.62	□□□□□ -2.15
DOT6	YER088C	EPL1	P43572	832 aa		1.62	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms