RNA–Protein interactions for RNA: YAR029W

YAR029W, Transcript of Member of DUP240 gene family but contains no transmembrane domains, yeast

Gene YAR029W, Length 225 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR029W	YAR029W	RFT1	P38206	574 aa	Predicted RBP	0.89	□□□□□ -2.27
YAR029W	YAR029W	MED6	P38782	295 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	YER084W	P40057	128 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	LSG1	P53145	640 aa	Known RBP	0.89	□□□□□ -2.27
YAR029W	YAR029W	FMP48	P53233	369 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	LST7	P53237	242 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	ACT1	P60010	375 aa	Known RBP	0.89	□□□□□ -2.27
YAR029W	YAR029W	YDR114C	Q04597	100 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	FEX1	Q08913	375 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	FEX2	Q08991	375 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	RPN5	Q12250	445 aa	Known RBP	0.89	□□□□□ -2.27
YAR029W	YAR029W	ISA2	Q12425	185 aa		0.89	□□□□□ -2.27
YAR029W	YAR029W	YKL187C	P34231	750 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	PCH2	P38126	564 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	CTM1	P38818	585 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	LCB2	P40970	561 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	TPC1	P53257	314 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	YNL095C	P53932	642 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	SPC19	Q03954	165 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	RRB1	Q04225	511 aa	Known RBP	0.88	□□□□□ -2.27
YAR029W	YAR029W	RPN6	Q12377	434 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	MRX4	Q12467	430 aa		0.88	□□□□□ -2.27
YAR029W	YAR029W	DAP2	P18962	818 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	DBR1	P24309	405 aa	Known RBP	0.87	□□□□□ -2.27
YAR029W	YAR029W	ITR2	P30606	609 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	MSK1	P32048	576 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	ATG7	P38862	630 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	ASP1	P38986	381 aa	Predicted RBP	0.87	□□□□□ -2.27
YAR029W	YAR029W	SLM1	P40485	686 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	YNL320W	P42840	284 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	EPL1	P43572	832 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	ECO1	P43605	281 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	BAT2	P47176	376 aa	Known RBP	0.87	□□□□□ -2.27
YAR029W	YAR029W	YGL118C	P53132	145 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	SDS23	P53172	527 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	SPH1	Q06160	661 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	SPE3	Q12074	293 aa	Known RBP	0.87	□□□□□ -2.27
YAR029W	YAR029W	IES3	Q12345	250 aa		0.87	□□□□□ -2.27
YAR029W	YAR029W	GRR1	P24814	1151 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	PSO2	P30620	661 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	SMF2	P38778	549 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	DSE1	P40077	573 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	HIT1	P46973	164 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	YOR283W	Q12040	230 aa	Known RBP	0.86	□□□□□ -2.27
YAR029W	YAR029W	TRM10	Q12400	293 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	FSH3	Q99369	266 aa		0.86	□□□□□ -2.27
YAR029W	YAR029W	ADH3	P07246	375 aa	Known RBP	0.85	□□□□□ -2.27
YAR029W	YAR029W	CLB6	P32943	380 aa		0.85	□□□□□ -2.27
YAR029W	YAR029W	PMT4	P46971	762 aa		0.85	□□□□□ -2.27
YAR029W	YAR029W	YNL040W	P53960	456 aa	Predicted RBP	0.85	□□□□□ -2.27
YAR029W	YAR029W	AIM33	Q04516	312 aa		0.85	□□□□□ -2.27
YAR029W	YAR029W	CSM3	Q04659	317 aa		0.85	□□□□□ -2.27
YAR029W	YAR029W	AIM45	Q12480	344 aa	Known RBP	0.85	□□□□□ -2.27
YAR029W	YAR029W	MHP1	P43638	1398 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	MRPL20	P22354	195 aa	Predicted RBP	0.84	□□□□□ -2.27
YAR029W	YAR029W	CSE1	P33307	960 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	YBL028C	P38202	106 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
YAR029W	YAR029W	CIK1	Q01649	594 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	CGI121	Q03705	181 aa	Known RBP	0.84	□□□□□ -2.27
YAR029W	YAR029W	YFH1	Q07540	174 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	PEX27	Q08580	376 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	ERP3	Q12403	225 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	TFC7	Q12415	435 aa		0.84	□□□□□ -2.27
YAR029W	YAR029W	YOL163W	P0CF20	169 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	ARF2	P19146	181 aa	Known RBP	0.83	□□□□□ -2.28
YAR029W	YAR029W	CKI1	P20485	582 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	PRE7	P23724	241 aa	Known RBP	0.83	□□□□□ -2.28
YAR029W	YAR029W	ERG9	P29704	444 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	BUD2	P33314	1104 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	MRPS5	P33759	307 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	EFM4	P40516	257 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	UFD1	P53044	361 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	MIM1	Q08176	113 aa		0.83	□□□□□ -2.28
YAR029W	YAR029W	CDC42	P19073	191 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	UTR1	P21373	530 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	YEL043W	P32618	956 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	MMS21	P38632	267 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	EDC2	P40023	145 aa	Predicted RBP	0.82	□□□□□ -2.28
YAR029W	YAR029W	YER188W	P40103	239 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	SNL1	P40548	159 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	MLC1	P53141	149 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	SYF2	P53277	215 aa	Predicted RBP	0.82	□□□□□ -2.28
YAR029W	YAR029W	SMP3	Q04174	516 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	NAT4	Q04751	285 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	PRM4	Q12498	284 aa		0.82	□□□□□ -2.28
YAR029W	YAR029W	REP1	P03871	373 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	RAD1	P06777	1100 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	DCC1	P25559	380 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	MXR2	P25566	168 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	SWE1	P32944	819 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	CAB3	P36076	571 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	PEX32	P38292	413 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	YHL044W	P38727	235 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	YML6	P51998	286 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	MPS2	P53159	387 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	GYL1	Q04322	720 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	MRX9	Q07349	420 aa	Known RBP	0.81	□□□□□ -2.28
YAR029W	YAR029W	VPS68	Q12016	184 aa		0.81	□□□□□ -2.28
YAR029W	YAR029W	TIM22	Q12328	207 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 94.6 ms