RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	DLD1	P32891	587 aa		5.02	□□□□□ -1.61
snR48	snR48	PSE1	P32337	1089 aa	Known RBP	5	□□□□□ -1.61
snR48	snR48	YBL086C	P38177	466 aa		5	□□□□□ -1.61
snR48	snR48	RPA14	P50106	137 aa		4.98	□□□□□ -1.61
snR48	snR48	NAM8	Q00539	523 aa	Known RBP	4.98	□□□□□ -1.61
snR48	snR48	YPR097W	Q06839	1073 aa		4.98	□□□□□ -1.61
snR48	snR48	ALR1	Q08269	859 aa		4.98	□□□□□ -1.61
snR48	snR48	CDC19	P00549	500 aa	Known RBP	4.95	□□□□□ -1.62
snR48	snR48	YMR187C	Q03236	431 aa		4.94	□□□□□ -1.62
snR48	snR48	TDA6	Q06466	467 aa		4.93	□□□□□ -1.62
snR48	snR48	IRC24	P40580	263 aa		4.91	□□□□□ -1.62
snR48	snR48	CUZ1	P53899	274 aa		4.9	□□□□□ -1.63
snR48	snR48	YDL206W	Q12424	762 aa		4.9	□□□□□ -1.63
snR48	snR48	ADE12	P80210	433 aa	Known RBP	4.89	□□□□□ -1.63
snR48	snR48	MCX1	P38323	520 aa	Predicted RBP	4.88	□□□□□ -1.63
snR48	snR48	CEM1	P39525	442 aa		4.88	□□□□□ -1.63
snR48	snR48	SBE2	P42223	864 aa	Known RBP	4.88	□□□□□ -1.63
snR48	snR48	VTC4	P47075	721 aa		4.87	□□□□□ -1.63
snR48	snR48	VAC17	P25591	423 aa		4.86	□□□□□ -1.63
snR48	snR48	PUS6	P53294	404 aa		4.86	□□□□□ -1.63
snR48	snR48	YCK2	P23292	546 aa	Known RBP	4.85	□□□□□ -1.63
snR48	snR48	AMN1	P38285	549 aa	Predicted RBP	4.85	□□□□□ -1.63
snR48	snR48	NIS1	P53939	407 aa		4.85	□□□□□ -1.63
snR48	snR48	SLY41	P22215	453 aa		4.84	□□□□□ -1.63
snR48	snR48	EMW1	P42842	904 aa	Known RBP	4.84	□□□□□ -1.63
snR48	snR48	TBF1	Q02457	562 aa		4.83	□□□□□ -1.64
snR48	snR48	SYT1	Q06836	1226 aa		4.83	□□□□□ -1.64
snR48	snR48	MAC1	P35192	417 aa		4.81	□□□□□ -1.64
snR48	snR48	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
snR48	snR48	VPS70	P47161	811 aa		4.81	□□□□□ -1.64
snR48	snR48	YPL034W	Q03083	165 aa		4.8	□□□□□ -1.64
snR48	snR48	YDR215C	Q12240	137 aa		4.8	□□□□□ -1.64
snR48	snR48	TEA1	P47988	759 aa		4.79	□□□□□ -1.64
snR48	snR48	APP1	P53933	587 aa		4.78	□□□□□ -1.64
snR48	snR48	YDR461C-A	Q2V2P7	80 aa		4.78	□□□□□ -1.64
snR48	snR48	LSB6	P42951	607 aa		4.77	□□□□□ -1.65
snR48	snR48	TRM1	P15565	570 aa	Known RBP	4.76	□□□□□ -1.65
snR48	snR48	DIT1	P21623	536 aa		4.76	□□□□□ -1.65
snR48	snR48	YNR014W	P53719	212 aa		4.76	□□□□□ -1.65
snR48	snR48	FPK1	P53739	893 aa		4.75	□□□□□ -1.65
snR48	snR48	DAL1	P32375	460 aa		4.74	□□□□□ -1.65
snR48	snR48	SLN1	P39928	1220 aa	Predicted RBP	4.74	□□□□□ -1.65
snR48	snR48	DFG5	Q05031	458 aa		4.74	□□□□□ -1.65
snR48	snR48	YMR265C	Q03508	461 aa	Known RBP	4.73	□□□□□ -1.65
snR48	snR48	MCA1	Q08601	432 aa		4.73	□□□□□ -1.65
snR48	snR48	MKS1	P34072	584 aa		4.72	□□□□□ -1.65
snR48	snR48	INP52	P50942	1183 aa		4.71	□□□□□ -1.66
snR48	snR48	GLT1	Q12680	2145 aa	Known RBP	4.71	□□□□□ -1.66
snR48	snR48	ITT1	Q04638	464 aa		4.7	□□□□□ -1.66
snR48	snR48	BDS1	Q08347	646 aa		4.7	□□□□□ -1.66
snR48	snR48	GPM1	P00950	247 aa	Known RBP	4.69	□□□□□ -1.66
snR48	snR48	BOI2	P39969	1040 aa		4.69	□□□□□ -1.66
snR48	snR48	KRE33	P53914	1056 aa	Known RBP	4.69	□□□□□ -1.66
snR48	snR48	YMR196W	Q04336	1088 aa		4.69	□□□□□ -1.66
snR48	snR48	STE6	P12866	1290 aa		4.68	□□□□□ -1.66
snR48	snR48	UBP15	P50101	1230 aa		4.68	□□□□□ -1.66
snR48	snR48	TAT1	P38085	619 aa		4.67	□□□□□ -1.66
snR48	snR48	PBS2	P08018	668 aa		4.66	□□□□□ -1.66
snR48	snR48	ALO1	P54783	526 aa	Known RBP	4.66	□□□□□ -1.66
snR48	snR48	FBP26	P32604	452 aa		4.65	□□□□□ -1.67
snR48	snR48	HST2	P53686	357 aa		4.65	□□□□□ -1.67
snR48	snR48	OMA1	P36163	345 aa		4.64	□□□□□ -1.67
snR48	snR48	MET1	P36150	593 aa		4.63	□□□□□ -1.67
snR48	snR48	SCJ1	P25303	377 aa		4.61	□□□□□ -1.67
snR48	snR48	MAM3	Q12296	706 aa		4.61	□□□□□ -1.67
snR48	snR48	SLA1	P32790	1244 aa		4.6	□□□□□ -1.67
snR48	snR48	AVT1	P47082	602 aa		4.6	□□□□□ -1.67
snR48	snR48	CKB1	P43639	278 aa		4.58	□□□□□ -1.68
snR48	snR48	PRY1	P47032	299 aa		4.57	□□□□□ -1.68
snR48	snR48	MSN5	P52918	1224 aa		4.57	□□□□□ -1.68
snR48	snR48	NAF1	P53919	492 aa	Known RBP	4.57	□□□□□ -1.68
snR48	snR48	AOS1	Q06624	347 aa		4.57	□□□□□ -1.68
snR48	snR48	KNS1	P32350	737 aa	Predicted RBP	4.56	□□□□□ -1.68
snR48	snR48	FIG4	P42837	879 aa		4.56	□□□□□ -1.68
snR48	snR48	NUP42	P49686	430 aa	Known RBP	4.56	□□□□□ -1.68
snR48	snR48	MMP1	Q12372	583 aa		4.56	□□□□□ -1.68
snR48	snR48	TY1A-DR3	Q12441	440 aa		4.56	□□□□□ -1.68
snR48	snR48	IES2	P40154	320 aa		4.55	□□□□□ -1.68
snR48	snR48	RSC30	P38781	883 aa		4.54	□□□□□ -1.68
snR48	snR48	PDC5	P16467	563 aa	Known RBP	4.53	□□□□□ -1.68
snR48	snR48	SSN3	P39073	555 aa		4.53	□□□□□ -1.68
snR48	snR48	FPS1	P23900	669 aa		4.52	□□□□□ -1.69
snR48	snR48	ELM1	P32801	640 aa		4.52	□□□□□ -1.69
snR48	snR48	ISU1	Q03020	165 aa		4.52	□□□□□ -1.69
snR48	snR48	GIS1	Q03833	894 aa		4.52	□□□□□ -1.69
snR48	snR48	DLD3	P39976	496 aa	Known RBP	4.51	□□□□□ -1.69
snR48	snR48	RPP2B	P02400	110 aa	Known RBP	4.5	□□□□□ -1.69
snR48	snR48	GLN1	P32288	370 aa	Known RBP	4.5	□□□□□ -1.69
snR48	snR48	DSF2	P38213	736 aa		4.5	□□□□□ -1.69
snR48	snR48	ESS1	P22696	170 aa		4.48	□□□□□ -1.69
snR48	snR48	YPR084W	Q06821	456 aa		4.48	□□□□□ -1.69
snR48	snR48	YJU3	P28321	313 aa		4.47	□□□□□ -1.69
snR48	snR48	PGM1	P33401	570 aa	Known RBP	4.46	□□□□□ -1.7
snR48	snR48	AHP1	P38013	176 aa	Known RBP	4.46	□□□□□ -1.7
snR48	snR48	TPS3	P38426	1054 aa	Known RBP	4.45	□□□□□ -1.7
snR48	snR48	TEC1	P18412	486 aa		4.43	□□□□□ -1.7
snR48	snR48	DIT2	P21595	489 aa		4.43	□□□□□ -1.7
snR48	snR48	BUD9	P53226	547 aa		4.43	□□□□□ -1.7
snR48	snR48	TY1A-DR2	Q03964	440 aa	Known RBP	4.42	□□□□□ -1.7
snR48	snR48	ATG20	Q07528	640 aa		4.42	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms