RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W YFL066CP43538 392 aa1.88□□□□□ -2.11
RDS3YPR094W CCT8P47079 568 aaKnown RBP1.88□□□□□ -2.11
RDS3YPR094W TEA1P47988 759 aa1.88□□□□□ -2.11
RDS3YPR094W ITT1Q04638 464 aa1.88□□□□□ -2.11
RDS3YPR094W ALR1Q08269 859 aa1.88□□□□□ -2.11
RDS3YPR094W SCJ1P25303 377 aa1.87□□□□□ -2.11
RDS3YPR094W YBL086CP38177 466 aa1.87□□□□□ -2.11
RDS3YPR094W RTT106P40161 455 aa1.87□□□□□ -2.11
RDS3YPR094W PUS6P53294 404 aa1.87□□□□□ -2.11
RDS3YPR094W FPK1P53739 893 aa1.87□□□□□ -2.11
RDS3YPR094W NSG2P53898 299 aa1.87□□□□□ -2.11
RDS3YPR094W NAM8Q00539 523 aaKnown RBP1.87□□□□□ -2.11
RDS3YPR094W TRM1P15565 570 aaKnown RBP1.86□□□□□ -2.11
RDS3YPR094W VAC17P25591 423 aa1.86□□□□□ -2.11
RDS3YPR094W JJJ3P47138 172 aa1.86□□□□□ -2.11
RDS3YPR094W LYS5P50113 272 aa1.86□□□□□ -2.11
RDS3YPR094W APP1P53933 587 aa1.86□□□□□ -2.11
RDS3YPR094W THI72Q08579 599 aa1.86□□□□□ -2.11
RDS3YPR094W NUP42P49686 430 aaKnown RBP1.85□□□□□ -2.11
RDS3YPR094W TBF1Q02457 562 aa1.85□□□□□ -2.11
RDS3YPR094W MAM3Q12296 706 aa1.85□□□□□ -2.11
RDS3YPR094W IES2P40154 320 aa1.84□□□□□ -2.11
RDS3YPR094W BUB1P41695 1021 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
RDS3YPR094W CDC19P00549 500 aaKnown RBP1.83□□□□□ -2.12
RDS3YPR094W AI1P03875 834 aa1.83□□□□□ -2.12
RDS3YPR094W DIT2P21595 489 aa1.83□□□□□ -2.12
RDS3YPR094W EMW1P42842 904 aaKnown RBP1.83□□□□□ -2.12
RDS3YPR094W CKB1P43639 278 aa1.83□□□□□ -2.12
RDS3YPR094W YMR196WQ04336 1088 aa1.83□□□□□ -2.12
RDS3YPR094W HST2P53686 357 aa1.82□□□□□ -2.12
RDS3YPR094W CUZ1P53899 274 aa1.82□□□□□ -2.12
RDS3YPR094W DFG5Q05031 458 aa1.82□□□□□ -2.12
RDS3YPR094W YJU3P28321 313 aa1.81□□□□□ -2.12
RDS3YPR094W DSF2P38213 736 aa1.81□□□□□ -2.12
RDS3YPR094W SKN7P38889 622 aa1.81□□□□□ -2.12
RDS3YPR094W SBE2P42223 864 aaKnown RBP1.81□□□□□ -2.12
RDS3YPR094W YPR053CQ6Q5F3 151 aa1.81□□□□□ -2.12
RDS3YPR094W ESS1P22696 170 aa1.8□□□□□ -2.12
RDS3YPR094W MKS1P34072 584 aa1.8□□□□□ -2.12
RDS3YPR094W TDA6Q06466 467 aa1.8□□□□□ -2.12
RDS3YPR094W MMP1Q12372 583 aa1.8□□□□□ -2.12
RDS3YPR094W RSC30P38781 883 aa1.79□□□□□ -2.12
RDS3YPR094W CEM1P39525 442 aa1.79□□□□□ -2.12
RDS3YPR094W STE6P12866 1290 aa1.78□□□□□ -2.12
RDS3YPR094W GLN1P32288 370 aaKnown RBP1.78□□□□□ -2.12
RDS3YPR094W FIG4P42837 879 aa1.78□□□□□ -2.12
RDS3YPR094W VTC4P47075 721 aa1.78□□□□□ -2.12
RDS3YPR094W YMR187CQ03236 431 aa1.78□□□□□ -2.12
RDS3YPR094W SYT1Q06836 1226 aa1.78□□□□□ -2.12
RDS3YPR094W BDS1Q08347 646 aa1.78□□□□□ -2.12
RDS3YPR094W YCK2P23292 546 aaKnown RBP1.77□□□□□ -2.13
RDS3YPR094W DAL1P32375 460 aa1.77□□□□□ -2.13
RDS3YPR094W FBP26P32604 452 aa1.77□□□□□ -2.13
RDS3YPR094W IRC24P40580 263 aa1.77□□□□□ -2.13
RDS3YPR094W ADE12P80210 433 aaKnown RBP1.77□□□□□ -2.13
RDS3YPR094W DIT1P21623 536 aa1.76□□□□□ -2.13
RDS3YPR094W KTR1P27810 393 aaKnown RBP1.76□□□□□ -2.13
RDS3YPR094W MCX1P38323 520 aaPredicted RBP1.76□□□□□ -2.13
RDS3YPR094W SLN1P39928 1220 aaPredicted RBP1.76□□□□□ -2.13
RDS3YPR094W KRE33P53914 1056 aaKnown RBP1.76□□□□□ -2.13
RDS3YPR094W YMR265CQ03508 461 aaKnown RBP1.76□□□□□ -2.13
RDS3YPR094W SLA1P32790 1244 aa1.75□□□□□ -2.13
RDS3YPR094W AMN1P38285 549 aaPredicted RBP1.75□□□□□ -2.13
RDS3YPR094W YNR014WP53719 212 aa1.75□□□□□ -2.13
RDS3YPR094W YPR084WQ06821 456 aa1.75□□□□□ -2.13
RDS3YPR094W MCA1Q08601 432 aa1.75□□□□□ -2.13
RDS3YPR094W YDR215CQ12240 137 aa1.75□□□□□ -2.13
RDS3YPR094W TY1A-DR3Q12441 440 aa1.75□□□□□ -2.13
RDS3YPR094W MAC1P35192 417 aa1.74□□□□□ -2.13
RDS3YPR094W LSB6P42951 607 aa1.74□□□□□ -2.13
RDS3YPR094W UBP15P50101 1230 aa1.74□□□□□ -2.13
RDS3YPR094W ISU1Q03020 165 aa1.74□□□□□ -2.13
RDS3YPR094W PKH3Q03306 898 aaPredicted RBP1.74□□□□□ -2.13
RDS3YPR094W YDR461C-AQ2V2P7 80 aa1.74□□□□□ -2.13
RDS3YPR094W TEC1P18412 486 aa1.73□□□□□ -2.13
RDS3YPR094W ARG8P18544 423 aa1.73□□□□□ -2.13
RDS3YPR094W SPB4P25808 606 aaPredicted RBP1.73□□□□□ -2.13
RDS3YPR094W SSN3P39073 555 aa1.73□□□□□ -2.13
RDS3YPR094W BOI2P39969 1040 aa1.73□□□□□ -2.13
RDS3YPR094W YPL034WQ03083 165 aa1.73□□□□□ -2.13
RDS3YPR094W GPM1P00950 247 aaKnown RBP1.72□□□□□ -2.13
RDS3YPR094W ATG20Q07528 640 aa1.72□□□□□ -2.13
RDS3YPR094W SAS10Q12136 610 aaPredicted RBP1.72□□□□□ -2.13
RDS3YPR094W DLD3P39976 496 aaKnown RBP1.71□□□□□ -2.14
RDS3YPR094W PRY1P47032 299 aa1.71□□□□□ -2.14
RDS3YPR094W MSN5P52918 1224 aa1.71□□□□□ -2.14
RDS3YPR094W ATF2P53296 535 aa1.71□□□□□ -2.14
RDS3YPR094W WTM2Q12206 467 aa1.71□□□□□ -2.14
RDS3YPR094W TAT1P38085 619 aa1.7□□□□□ -2.14
RDS3YPR094W NAF1P53919 492 aaKnown RBP1.7□□□□□ -2.14
RDS3YPR094W ALO1P54783 526 aaKnown RBP1.7□□□□□ -2.14
RDS3YPR094W PDC5P16467 563 aaKnown RBP1.69□□□□□ -2.14
RDS3YPR094W FPS1P23900 669 aa1.69□□□□□ -2.14
RDS3YPR094W GUT2P32191 649 aa1.69□□□□□ -2.14
RDS3YPR094W GLC3P32775 704 aa1.69□□□□□ -2.14
RDS3YPR094W SHM1P37292 490 aaPredicted RBP1.69□□□□□ -2.14
RDS3YPR094W INP52P50942 1183 aa1.69□□□□□ -2.14
RDS3YPR094W RAD59Q12223 238 aa1.69□□□□□ -2.14
RDS3YPR094W DAT1P13483 248 aaKnown RBP1.68□□□□□ -2.14
RDS3YPR094W KNS1P32350 737 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 133.2 ms