RNA–Protein interactions for RNA: YPR093C

ASR1, Transcript of Ubiquitin ligase that modifies and regulates RNA Pol II, yeastyeast

Gene ASR1, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASR1YPR093C PRP40P33203 583 aaKnown RBP8.95□□□□□ -0.98
ASR1YPR093C TAP42Q04372 366 aa8.94□□□□□ -0.98
ASR1YPR093C SNF2P22082 1703 aa8.94□□□□□ -0.98
ASR1YPR093C MEC3Q02574 474 aa8.93□□□□□ -0.98
ASR1YPR093C YRF1-4O13559 1382 aa8.92□□□□□ -0.98
ASR1YPR093C COBP00163 385 aa8.92□□□□□ -0.98
ASR1YPR093C SCY1P53009 804 aa8.92□□□□□ -0.98
ASR1YPR093C SEC3P33332 1336 aaKnown RBP8.91□□□□□ -0.98
ASR1YPR093C KAR2P16474 682 aaKnown RBP8.91□□□□□ -0.98
ASR1YPR093C BDF1P35817 686 aa8.91□□□□□ -0.98
ASR1YPR093C HIM1Q06674 414 aa8.91□□□□□ -0.98
ASR1YPR093C AUS1Q08409 1394 aa8.9□□□□□ -0.98
ASR1YPR093C MRM1P25270 412 aa8.9□□□□□ -0.98
ASR1YPR093C RCR1P38212 213 aa8.9□□□□□ -0.98
ASR1YPR093C SIR4P11978 1358 aa8.89□□□□□ -0.99
ASR1YPR093C YBL086CP38177 466 aa8.89□□□□□ -0.99
ASR1YPR093C NPR2P39923 615 aa8.89□□□□□ -0.99
ASR1YPR093C UGA2P38067 497 aa8.88□□□□□ -0.99
ASR1YPR093C ALD2P47771 506 aa8.88□□□□□ -0.99
ASR1YPR093C FRK1Q03002 865 aaPredicted RBP8.88□□□□□ -0.99
ASR1YPR093C RIM15P43565 1770 aa8.87□□□□□ -0.99
ASR1YPR093C YKR075CP36155 307 aa8.87□□□□□ -0.99
ASR1YPR093C LYS4P49367 693 aaPredicted RBP8.87□□□□□ -0.99
ASR1YPR093C GTT3P39996 337 aa8.86□□□□□ -0.99
ASR1YPR093C PAP2P53632 584 aaKnown RBP8.86□□□□□ -0.99
ASR1YPR093C ADE16P54113 591 aaKnown RBP8.86□□□□□ -0.99
ASR1YPR093C ATG13Q06628 738 aa8.86□□□□□ -0.99
ASR1YPR093C UBP10P53874 792 aaPredicted RBP8.85□□□□□ -0.99
ASR1YPR093C RPO41P13433 1351 aaKnown RBP8.85□□□□□ -0.99
ASR1YPR093C MAP2P38174 421 aaKnown RBP8.84□□□□□ -0.99
ASR1YPR093C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
ASR1YPR093C SSA2P10592 639 aaKnown RBP8.83□□□□□ -1
ASR1YPR093C RAM2P29703 316 aa8.83□□□□□ -1
ASR1YPR093C YGL015CP33199 130 aa8.82□□□□□ -1
ASR1YPR093C SPT7P35177 1332 aa8.8□□□□□ -1
ASR1YPR093C HSP104P31539 908 aaKnown RBP8.8□□□□□ -1
ASR1YPR093C TRK1P12685 1235 aa8.79□□□□□ -1
ASR1YPR093C DSD1P53095 428 aa8.79□□□□□ -1
ASR1YPR093C INP54Q08227 384 aaKnown RBP8.79□□□□□ -1
ASR1YPR093C MSB4Q12317 492 aa8.79□□□□□ -1
ASR1YPR093C OSM1P21375 501 aaKnown RBP8.78□□□□□ -1
ASR1YPR093C CTH1P47976 325 aa8.78□□□□□ -1
ASR1YPR093C NST1P53935 1240 aa8.78□□□□□ -1
ASR1YPR093C CTF4Q01454 927 aa8.78□□□□□ -1
ASR1YPR093C GRX1P25373 110 aaKnown RBP8.77□□□□□ -1.01
ASR1YPR093C AKL1P38080 1108 aaKnown RBP8.77□□□□□ -1.01
ASR1YPR093C SET1P38827 1080 aaKnown RBP8.77□□□□□ -1.01
ASR1YPR093C YBP2P53169 641 aa8.77□□□□□ -1.01
ASR1YPR093C ALD3P54114 506 aa8.76□□□□□ -1.01
ASR1YPR093C AOS1Q06624 347 aa8.75□□□□□ -1.01
ASR1YPR093C BUG1Q12191 341 aa8.75□□□□□ -1.01
ASR1YPR093C SLX5P32828 619 aaKnown RBP8.74□□□□□ -1.01
ASR1YPR093C NUP145P49687 1317 aa8.74□□□□□ -1.01
ASR1YPR093C RAD4P14736 754 aa8.73□□□□□ -1.01
ASR1YPR093C GRE2Q12068 342 aaKnown RBP8.73□□□□□ -1.01
ASR1YPR093C KCC4P25389 1037 aa8.7□□□□□ -1.02
ASR1YPR093C MAK11P20484 414 aaKnown RBP8.69□□□□□ -1.02
ASR1YPR093C RTR1P40084 226 aaPredicted RBP8.69□□□□□ -1.02
ASR1YPR093C UTP22P53254 1237 aaPredicted RBP8.69□□□□□ -1.02
ASR1YPR093C HPC2Q01448 625 aa8.69□□□□□ -1.02
ASR1YPR093C RMT2Q03305 412 aa8.69□□□□□ -1.02
ASR1YPR093C NTH2P35172 780 aa8.68□□□□□ -1.02
ASR1YPR093C SAP155P43612 1002 aa8.67□□□□□ -1.02
ASR1YPR093C VPS70P47161 811 aa8.67□□□□□ -1.02
ASR1YPR093C RRP46P53256 223 aaPredicted RBP8.67□□□□□ -1.02
ASR1YPR093C TUM1Q08686 304 aaKnown RBP8.67□□□□□ -1.02
ASR1YPR093C ALE1Q08548 619 aa8.66□□□□□ -1.02
ASR1YPR093C UGA3P26370 528 aa8.65□□□□□ -1.02
ASR1YPR093C MDG1P53885 366 aa8.65□□□□□ -1.02
ASR1YPR093C NSE3Q05541 303 aa8.65□□□□□ -1.02
ASR1YPR093C NOP53Q12080 455 aaKnown RBP8.65□□□□□ -1.02
ASR1YPR093C SSA1P10591 642 aaKnown RBP8.64□□□□□ -1.03
ASR1YPR093C SPB4P25808 606 aaPredicted RBP8.64□□□□□ -1.03
ASR1YPR093C TOS1P38288 455 aa8.64□□□□□ -1.03
ASR1YPR093C VPS29P38759 282 aa8.64□□□□□ -1.03
ASR1YPR093C RRT14P40470 206 aa8.64□□□□□ -1.03
ASR1YPR093C BUD27P43573 796 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
ASR1YPR093C YNL050CP53952 270 aa8.64□□□□□ -1.03
ASR1YPR093C PRD1P25375 712 aa8.63□□□□□ -1.03
ASR1YPR093C TEA1P47988 759 aa8.63□□□□□ -1.03
ASR1YPR093C IOC4Q04213 475 aa8.63□□□□□ -1.03
ASR1YPR093C YPR148CQ06523 435 aa8.63□□□□□ -1.03
ASR1YPR093C SER1P33330 395 aaKnown RBP8.62□□□□□ -1.03
ASR1YPR093C ZDS1P50111 915 aaKnown RBP8.62□□□□□ -1.03
ASR1YPR093C MSN5P52918 1224 aa8.62□□□□□ -1.03
ASR1YPR093C UTP10P42945 1769 aaKnown RBP8.61□□□□□ -1.03
ASR1YPR093C CTI6Q08923 506 aa8.61□□□□□ -1.03
ASR1YPR093C NYV1Q12255 253 aa8.61□□□□□ -1.03
ASR1YPR093C YFR016CP43597 1233 aaKnown RBP8.6□□□□□ -1.03
ASR1YPR093C EAF6P47128 113 aa8.6□□□□□ -1.03
ASR1YPR093C RIX7Q07844 837 aaKnown RBP8.6□□□□□ -1.03
ASR1YPR093C SSP2Q08646 371 aa8.6□□□□□ -1.03
ASR1YPR093C PHM7Q12252 991 aa8.6□□□□□ -1.03
ASR1YPR093C MAM1P40065 302 aa8.59□□□□□ -1.03
ASR1YPR093C MPP10P47083 593 aaKnown RBP8.59□□□□□ -1.03
ASR1YPR093C YMR1P47147 688 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
ASR1YPR093C LPD1P09624 499 aaKnown RBP8.58□□□□□ -1.04
ASR1YPR093C YGL082WP53155 381 aa8.58□□□□□ -1.04
ASR1YPR093C AIM44Q99299 758 aa8.58□□□□□ -1.04
ASR1YPR093C COQ8P27697 501 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms