RNA–Protein interactions for RNA: YPL106C

SSE1, Transcript of ATPase component of heat shock protein Hsp90 chaperone complex, yeast

Gene SSE1, Length 2,082 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSE1	YPL106C	MTC5	Q03897	1148 aa		4.21	□□□□□ -1.74
SSE1	YPL106C	OPT2	Q06593	877 aa		4.21	□□□□□ -1.74
SSE1	YPL106C	KTR1	P27810	393 aa	Known RBP	4.2	□□□□□ -1.74
SSE1	YPL106C	GLY1	P37303	387 aa	Known RBP	4.2	□□□□□ -1.74
SSE1	YPL106C	NUP85	P46673	744 aa		4.2	□□□□□ -1.74
SSE1	YPL106C	YPR097W	Q06839	1073 aa		4.2	□□□□□ -1.74
SSE1	YPL106C	TYW1	Q08960	810 aa	Known RBP	4.2	□□□□□ -1.74
SSE1	YPL106C	MRT4	P33201	236 aa	Known RBP	4.19	□□□□□ -1.74
SSE1	YPL106C	SGS1	P35187	1447 aa		4.19	□□□□□ -1.74
SSE1	YPL106C	TRK2	P28584	889 aa		4.18	□□□□□ -1.74
SSE1	YPL106C	GLN1	P32288	370 aa	Known RBP	4.18	□□□□□ -1.74
SSE1	YPL106C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SSE1	YPL106C	YGR035C	P53222	116 aa		4.18	□□□□□ -1.74
SSE1	YPL106C	HST2	P53686	357 aa		4.18	□□□□□ -1.74
SSE1	YPL106C	YDL206W	Q12424	762 aa		4.18	□□□□□ -1.74
SSE1	YPL106C	SCW11	P53189	542 aa		4.18	□□□□□ -1.74
SSE1	YPL106C	MIP1	P15801	1254 aa		4.17	□□□□□ -1.74
SSE1	YPL106C	YJL007C	P47080	104 aa		4.17	□□□□□ -1.74
SSE1	YPL106C	MMP1	Q12372	583 aa		4.17	□□□□□ -1.74
SSE1	YPL106C	BIM1	P40013	344 aa		4.16	□□□□□ -1.74
SSE1	YPL106C	PKH3	Q03306	898 aa	Predicted RBP	4.15	□□□□□ -1.74
SSE1	YPL106C	ARG82	P07250	355 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	TRM1	P15565	570 aa	Known RBP	4.15	□□□□□ -1.75
SSE1	YPL106C	ESS1	P22696	170 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	SCJ1	P25303	377 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	YBL036C	P38197	257 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	ATG32	P40458	529 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	YIR007W	P40566	764 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	RAD59	Q12223	238 aa		4.15	□□□□□ -1.75
SSE1	YPL106C	LSC2	P53312	427 aa		4.14	□□□□□ -1.75
SSE1	YPL106C	MON2	P48563	1636 aa	Predicted RBP	4.14	□□□□□ -1.75
SSE1	YPL106C	RPL34B	P40525	121 aa	Known RBP	4.14	□□□□□ -1.75
SSE1	YPL106C	UBP2	Q01476	1272 aa		4.14	□□□□□ -1.75
SSE1	YPL106C	TY1A-BL	Q12266	440 aa		4.14	□□□□□ -1.75
SSE1	YPL106C	TIF1	P10081	395 aa	Known RBP	4.12	□□□□□ -1.75
SSE1	YPL106C	YJU3	P28321	313 aa		4.12	□□□□□ -1.75
SSE1	YPL106C	BIO2	P32451	375 aa		4.12	□□□□□ -1.75
SSE1	YPL106C	CSE4	P36012	229 aa		4.12	□□□□□ -1.75
SSE1	YPL106C	HPF1	Q05164	967 aa		4.12	□□□□□ -1.75
SSE1	YPL106C	ARG8	P18544	423 aa		4.12	□□□□□ -1.75
SSE1	YPL106C	INO80	P53115	1489 aa		4.12	□□□□□ -1.75
SSE1	YPL106C	AAD14	P42884	376 aa		4.11	□□□□□ -1.75
SSE1	YPL106C	YPR204W	Q08995	1032 aa		4.11	□□□□□ -1.75
SSE1	YPL106C	VAC17	P25591	423 aa		4.1	□□□□□ -1.75
SSE1	YPL106C	YBL086C	P38177	466 aa		4.09	□□□□□ -1.75
SSE1	YPL106C	YNL108C	P53929	270 aa		4.09	□□□□□ -1.75
SSE1	YPL106C	SUB2	Q07478	446 aa	Known RBP	4.09	□□□□□ -1.75
SSE1	YPL106C	TCB3	Q03640	1545 aa	Known RBP	4.09	□□□□□ -1.75
SSE1	YPL106C	RTG2	P32608	588 aa	Known RBP	4.09	□□□□□ -1.76
SSE1	YPL106C	RSC30	P38781	883 aa		4.09	□□□□□ -1.76
SSE1	YPL106C	SSA1	P10591	642 aa	Known RBP	4.08	□□□□□ -1.76
SSE1	YPL106C	SSA4	P22202	642 aa	Known RBP	4.08	□□□□□ -1.76
SSE1	YPL106C	SPT5	P27692	1063 aa	Known RBP	4.08	□□□□□ -1.76
SSE1	YPL106C	YJR098C	P47139	656 aa		4.08	□□□□□ -1.76
SSE1	YPL106C	DPH6	Q12429	685 aa		4.08	□□□□□ -1.76
SSE1	YPL106C	MAK16	P10962	306 aa	Predicted RBP	4.07	□□□□□ -1.76
SSE1	YPL106C	TCB1	Q12466	1186 aa		4.07	□□□□□ -1.76
SSE1	YPL106C	SUP45	P12385	437 aa	Known RBP	4.07	□□□□□ -1.76
SSE1	YPL106C	ICP55	P40051	511 aa		4.07	□□□□□ -1.76
SSE1	YPL106C	TY1B-DR4	Q07793	1604 aa		4.06	□□□□□ -1.76
SSE1	YPL106C	DLD1	P32891	587 aa		4.06	□□□□□ -1.76
SSE1	YPL106C	GEF1	P37020	779 aa		4.06	□□□□□ -1.76
SSE1	YPL106C	OSH7	P38755	437 aa		4.06	□□□□□ -1.76
SSE1	YPL106C	EMW1	P42842	904 aa	Known RBP	4.06	□□□□□ -1.76
SSE1	YPL106C	PUS1	Q12211	544 aa	Known RBP	4.06	□□□□□ -1.76
SSE1	YPL106C	YDJ1	P25491	409 aa	Known RBP	4.05	□□□□□ -1.76
SSE1	YPL106C	CPS1	P27614	576 aa		4.05	□□□□□ -1.76
SSE1	YPL106C	ROG3	P43602	733 aa		4.05	□□□□□ -1.76
SSE1	YPL106C	LYS5	P50113	272 aa		4.05	□□□□□ -1.76
SSE1	YPL106C	APP1	P53933	587 aa		4.05	□□□□□ -1.76
SSE1	YPL106C	TY1A-MR1	Q04215	440 aa		4.05	□□□□□ -1.76
SSE1	YPL106C	ENO2	P00925	437 aa	Known RBP	4.04	□□□□□ -1.76
SSE1	YPL106C	TTI1	P36097	1038 aa		4.04	□□□□□ -1.76
SSE1	YPL106C	PHM7	Q12252	991 aa		4.04	□□□□□ -1.76
SSE1	YPL106C	SIS2	P36024	562 aa		4.03	□□□□□ -1.76
SSE1	YPL106C	RIM21	P48565	533 aa		4.03	□□□□□ -1.76
SSE1	YPL106C	NAF1	P53919	492 aa	Known RBP	4.03	□□□□□ -1.76
SSE1	YPL106C	ENO1	P00924	437 aa	Known RBP	4.02	□□□□□ -1.77
SSE1	YPL106C	MKS1	P34072	584 aa		4.02	□□□□□ -1.77
SSE1	YPL106C	SWR1	Q05471	1514 aa		4.02	□□□□□ -1.77
SSE1	YPL106C	YPP1	P46951	817 aa		4.02	□□□□□ -1.77
SSE1	YPL106C	MRX10	Q05648	414 aa		4.02	□□□□□ -1.77
SSE1	YPL106C	DFG5	Q05031	458 aa		4.01	□□□□□ -1.77
SSE1	YPL106C	ITT1	Q04638	464 aa		4.01	□□□□□ -1.77
SSE1	YPL106C	LSB3	P43603	459 aa	Known RBP	4	□□□□□ -1.77
SSE1	YPL106C	RPL34A	P87262	121 aa	Predicted RBP	4	□□□□□ -1.77
SSE1	YPL106C	BDS1	Q08347	646 aa		4	□□□□□ -1.77
SSE1	YPL106C	NOB1	Q08444	459 aa	Known RBP	4	□□□□□ -1.77
SSE1	YPL106C	MCM16	Q12262	181 aa		4	□□□□□ -1.77
SSE1	YPL106C	CCP1	P00431	361 aa		3.99	□□□□□ -1.77
SSE1	YPL106C	SLX8	P40072	274 aa		3.99	□□□□□ -1.77
SSE1	YPL106C	FIG4	P42837	879 aa		3.99	□□□□□ -1.77
SSE1	YPL106C	YML020W	Q03722	664 aa		3.99	□□□□□ -1.77
SSE1	YPL106C	PUP1	P25043	261 aa		3.98	□□□□□ -1.77
SSE1	YPL106C	JJJ3	P47138	172 aa		3.98	□□□□□ -1.77
SSE1	YPL106C	CDC19	P00549	500 aa	Known RBP	3.97	□□□□□ -1.77
SSE1	YPL106C	TEC1	P18412	486 aa		3.97	□□□□□ -1.77
SSE1	YPL106C	RDS2	P19541	446 aa	Known RBP	3.97	□□□□□ -1.77
SSE1	YPL106C	ISF1	P32488	338 aa		3.97	□□□□□ -1.77
SSE1	YPL106C	FBP26	P32604	452 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms