RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C HSP104P31539 908 aaKnown RBP10.42□□□□□ -0.74
LSP1YPL004C AKL1P38080 1108 aaKnown RBP10.42□□□□□ -0.74
LSP1YPL004C ALD2P47771 506 aa10.42□□□□□ -0.74
LSP1YPL004C UGA2P38067 497 aa10.41□□□□□ -0.74
LSP1YPL004C CTH1P47976 325 aa10.4□□□□□ -0.74
LSP1YPL004C RRP46P53256 223 aaPredicted RBP10.4□□□□□ -0.74
LSP1YPL004C NUP145P49687 1317 aa10.39□□□□□ -0.75
LSP1YPL004C DIP2Q12220 943 aaPredicted RBP10.39□□□□□ -0.75
LSP1YPL004C SPT7P35177 1332 aa10.38□□□□□ -0.75
LSP1YPL004C MSB4Q12317 492 aa10.38□□□□□ -0.75
LSP1YPL004C SSA2P10592 639 aaKnown RBP10.37□□□□□ -0.75
LSP1YPL004C GRX1P25373 110 aaKnown RBP10.36□□□□□ -0.75
LSP1YPL004C AOS1Q06624 347 aa10.36□□□□□ -0.75
LSP1YPL004C NTH2P35172 780 aa10.35□□□□□ -0.75
LSP1YPL004C BDF1P35817 686 aa10.35□□□□□ -0.75
LSP1YPL004C HAA1Q12753 694 aaKnown RBP10.35□□□□□ -0.75
LSP1YPL004C RAD4P14736 754 aa10.34□□□□□ -0.75
LSP1YPL004C YBP2P53169 641 aa10.34□□□□□ -0.75
LSP1YPL004C TUM1Q08686 304 aaKnown RBP10.32□□□□□ -0.76
LSP1YPL004C GRE2Q12068 342 aaKnown RBP10.32□□□□□ -0.76
LSP1YPL004C PRD1P25375 712 aa10.31□□□□□ -0.76
LSP1YPL004C RTR1P40084 226 aaPredicted RBP10.31□□□□□ -0.76
LSP1YPL004C YNL050CP53952 270 aa10.31□□□□□ -0.76
LSP1YPL004C KCC4P25389 1037 aa10.3□□□□□ -0.76
LSP1YPL004C RPG1P38249 964 aaKnown RBP10.29□□□□□ -0.76
LSP1YPL004C ALD3P54114 506 aa10.29□□□□□ -0.76
LSP1YPL004C UTP22P53254 1237 aaPredicted RBP10.28□□□□□ -0.76
LSP1YPL004C BUG1Q12191 341 aa10.28□□□□□ -0.76
LSP1YPL004C UGA3P26370 528 aa10.27□□□□□ -0.77
LSP1YPL004C RMT2Q03305 412 aa10.26□□□□□ -0.77
LSP1YPL004C TOS1P38288 455 aa10.25□□□□□ -0.77
LSP1YPL004C MAM1P40065 302 aa10.23□□□□□ -0.77
LSP1YPL004C MPP10P47083 593 aaKnown RBP10.23□□□□□ -0.77
LSP1YPL004C ZDS1P50111 915 aaKnown RBP10.23□□□□□ -0.77
LSP1YPL004C MDG1P53885 366 aa10.23□□□□□ -0.77
LSP1YPL004C NSE3Q05541 303 aa10.23□□□□□ -0.77
LSP1YPL004C THI22Q06490 572 aa10.23□□□□□ -0.77
LSP1YPL004C ALE1Q08548 619 aa10.23□□□□□ -0.77
LSP1YPL004C NOP53Q12080 455 aaKnown RBP10.23□□□□□ -0.77
LSP1YPL004C PHM7Q12252 991 aa10.22□□□□□ -0.77
LSP1YPL004C NYV1Q12255 253 aa10.22□□□□□ -0.77
LSP1YPL004C YDL144CQ07589 356 aa10.21□□□□□ -0.77
LSP1YPL004C LYS2P07702 1392 aa10.21□□□□□ -0.78
LSP1YPL004C UTP10P42945 1769 aaKnown RBP10.21□□□□□ -0.78
LSP1YPL004C SSP2Q08646 371 aa10.19□□□□□ -0.78
LSP1YPL004C RPP0P05317 312 aaKnown RBP10.18□□□□□ -0.78
LSP1YPL004C AVT3P36062 692 aa10.18□□□□□ -0.78
LSP1YPL004C TEA1P47988 759 aa10.18□□□□□ -0.78
LSP1YPL004C HEF3P53978 1044 aaKnown RBP10.18□□□□□ -0.78
LSP1YPL004C RTT109Q07794 436 aa10.18□□□□□ -0.78
LSP1YPL004C BMS1Q08965 1183 aaKnown RBP10.18□□□□□ -0.78
LSP1YPL004C BUD27P43573 796 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
LSP1YPL004C SAP155P43612 1002 aa10.17□□□□□ -0.78
LSP1YPL004C GYP7P48365 746 aa10.17□□□□□ -0.78
LSP1YPL004C COQ4O13525 335 aa10.16□□□□□ -0.78
LSP1YPL004C RRT14P40470 206 aa10.16□□□□□ -0.78
LSP1YPL004C YFR016CP43597 1233 aaKnown RBP10.16□□□□□ -0.78
LSP1YPL004C HPC2Q01448 625 aa10.16□□□□□ -0.78
LSP1YPL004C SSA1P10591 642 aaKnown RBP10.14□□□□□ -0.79
LSP1YPL004C TPD3P31383 635 aa10.14□□□□□ -0.79
LSP1YPL004C SER1P33330 395 aaKnown RBP10.14□□□□□ -0.79
LSP1YPL004C RIX7Q07844 837 aaKnown RBP10.14□□□□□ -0.79
LSP1YPL004C ARG8P18544 423 aa10.13□□□□□ -0.79
LSP1YPL004C EAF6P47128 113 aa10.13□□□□□ -0.79
LSP1YPL004C LPD1P09624 499 aaKnown RBP10.12□□□□□ -0.79
LSP1YPL004C VPS27P40343 622 aaKnown RBP10.12□□□□□ -0.79
LSP1YPL004C YOL057WQ08225 711 aa10.12□□□□□ -0.79
LSP1YPL004C YPR204WQ08995 1032 aa10.12□□□□□ -0.79
LSP1YPL004C DCD1P06773 312 aa10.11□□□□□ -0.79
LSP1YPL004C ERT1P38140 529 aa10.11□□□□□ -0.79
LSP1YPL004C YGL082WP53155 381 aa10.11□□□□□ -0.79
LSP1YPL004C CTI6Q08923 506 aa10.11□□□□□ -0.79
LSP1YPL004C SUI2P20459 304 aaKnown RBP10.1□□□□□ -0.79
LSP1YPL004C YBR287WP38355 427 aa10.1□□□□□ -0.79
LSP1YPL004C MSN5P52918 1224 aa10.1□□□□□ -0.79
LSP1YPL004C ZDS2P54786 942 aa10.1□□□□□ -0.79
LSP1YPL004C RAT1Q02792 1006 aaKnown RBP10.1□□□□□ -0.79
LSP1YPL004C CTT1P06115 562 aa10.09□□□□□ -0.79
LSP1YPL004C YKL222CP35995 705 aa10.09□□□□□ -0.79
LSP1YPL004C APL2P36000 726 aaPredicted RBP10.09□□□□□ -0.79
LSP1YPL004C SRT1Q03175 343 aa10.09□□□□□ -0.79
LSP1YPL004C CDC45Q08032 650 aa10.08□□□□□ -0.8
LSP1YPL004C PFF1P38244 976 aa10.07□□□□□ -0.8
LSP1YPL004C DNM1P54861 757 aa10.07□□□□□ -0.8
LSP1YPL004C DIB1Q06819 143 aaPredicted RBP10.07□□□□□ -0.8
LSP1YPL004C YJR008WP47085 338 aa10.06□□□□□ -0.8
LSP1YPL004C CWH41P53008 833 aa10.05□□□□□ -0.8
LSP1YPL004C KIN4Q01919 800 aa10.05□□□□□ -0.8
LSP1YPL004C VPS64Q03944 604 aa10.05□□□□□ -0.8
LSP1YPL004C YLR271WQ06152 274 aa10.05□□□□□ -0.8
LSP1YPL004C YDR306CQ06640 478 aa10.05□□□□□ -0.8
LSP1YPL004C ISW2Q08773 1120 aa10.05□□□□□ -0.8
LSP1YPL004C BDF2Q07442 638 aa10.04□□□□□ -0.8
LSP1YPL004C HAT1Q12341 374 aa10.04□□□□□ -0.8
LSP1YPL004C SSK22P25390 1331 aaPredicted RBP10.04□□□□□ -0.8
LSP1YPL004C CST6P40535 587 aa10.03□□□□□ -0.8
LSP1YPL004C YRB30P53107 440 aaPredicted RBP10.03□□□□□ -0.8
LSP1YPL004C PMD1P32634 1753 aa10.02□□□□□ -0.81
LSP1YPL004C YER156CP40093 338 aaKnown RBP10.02□□□□□ -0.81
LSP1YPL004C SWI1P09547 1314 aa10.02□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms