RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	TAF2	P23255	1407 aa		4.69	□□□□□ -1.66
SNF2	YOR290C	HEM3	P28789	327 aa		4.69	□□□□□ -1.66
SNF2	YOR290C	PWP2	P25635	923 aa	Known RBP	4.68	□□□□□ -1.66
SNF2	YOR290C	NUG1	P40010	520 aa	Known RBP	4.68	□□□□□ -1.66
SNF2	YOR290C	VTH1	P40438	1549 aa		4.68	□□□□□ -1.66
SNF2	YOR290C	VTH2	P40890	1549 aa		4.68	□□□□□ -1.66
SNF2	YOR290C	MPP10	P47083	593 aa	Known RBP	4.68	□□□□□ -1.66
SNF2	YOR290C	SGM1	P47166	707 aa		4.68	□□□□□ -1.66
SNF2	YOR290C	BUG1	Q12191	341 aa		4.68	□□□□□ -1.66
SNF2	YOR290C	GIM3	P53900	129 aa		4.68	□□□□□ -1.66
SNF2	YOR290C	MDM38	Q08179	573 aa		4.68	□□□□□ -1.66
SNF2	YOR290C	CLB3	P24870	427 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	MRC1	P25588	1096 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	SMC3	P47037	1230 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	YNL247W	P53852	767 aa	Known RBP	4.67	□□□□□ -1.66
SNF2	YOR290C	SMI1	P32566	505 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	RAT1	Q02792	1006 aa	Known RBP	4.67	□□□□□ -1.66
SNF2	YOR290C	YLH47	Q06493	454 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	CHC1	P22137	1653 aa	Known RBP	4.67	□□□□□ -1.66
SNF2	YOR290C	BUD3	P25558	1636 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	SSP1	P38871	571 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	BDP1	P46678	594 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	ACF4	P47129	309 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	ZRT2	Q12436	422 aa		4.67	□□□□□ -1.66
SNF2	YOR290C	NAS2	P40555	220 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	URB2	P47108	1174 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	ISW2	Q08773	1120 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	NCB2	Q92317	146 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	BIK1	P11709	440 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	ZIP1	P31111	875 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	MIC60	P36112	540 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	RCF1	Q03713	159 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	BMS1	Q08965	1183 aa	Known RBP	4.66	□□□□□ -1.66
SNF2	YOR290C	SAP185	P40856	1058 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	PUS1	Q12211	544 aa	Known RBP	4.66	□□□□□ -1.66
SNF2	YOR290C	PDR5	P33302	1511 aa	Known RBP	4.66	□□□□□ -1.66
SNF2	YOR290C	KAR3	P17119	729 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	SEC27	P41811	889 aa	Known RBP	4.66	□□□□□ -1.66
SNF2	YOR290C	SMC4	Q12267	1418 aa		4.66	□□□□□ -1.66
SNF2	YOR290C	ZUO1	P32527	433 aa	Known RBP	4.65	□□□□□ -1.66
SNF2	YOR290C	YOR093C	Q12275	1648 aa		4.65	□□□□□ -1.66
SNF2	YOR290C	PKC1	P24583	1151 aa		4.65	□□□□□ -1.67
SNF2	YOR290C	PEX14	P53112	341 aa		4.65	□□□□□ -1.67
SNF2	YOR290C	SNU71	P53207	620 aa	Known RBP	4.65	□□□□□ -1.67
SNF2	YOR290C	RMD1	Q03441	430 aa		4.65	□□□□□ -1.67
SNF2	YOR290C	RLP24	Q07915	199 aa	Known RBP	4.65	□□□□□ -1.67
SNF2	YOR290C	GIN4	Q12263	1142 aa		4.65	□□□□□ -1.67
SNF2	YOR290C	DNF2	Q12675	1612 aa		4.65	□□□□□ -1.67
SNF2	YOR290C	CEF1	Q03654	590 aa	Predicted RBP	4.64	□□□□□ -1.67
SNF2	YOR290C	SLK19	Q08581	821 aa	Known RBP	4.64	□□□□□ -1.67
SNF2	YOR290C	PUS4	P48567	403 aa	Known RBP	4.64	□□□□□ -1.67
SNF2	YOR290C	MNR2	P35724	969 aa		4.64	□□□□□ -1.67
SNF2	YOR290C	YPR097W	Q06839	1073 aa		4.64	□□□□□ -1.67
SNF2	YOR290C	CSE1	P33307	960 aa		4.64	□□□□□ -1.67
SNF2	YOR290C	GCD6	P32501	712 aa	Known RBP	4.63	□□□□□ -1.67
SNF2	YOR290C	TAF5	P38129	798 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	NDC80	P40460	691 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	SAC6	P32599	642 aa	Known RBP	4.63	□□□□□ -1.67
SNF2	YOR290C	NUP188	P52593	1655 aa	Known RBP	4.63	□□□□□ -1.67
SNF2	YOR290C	RAD2	P07276	1031 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	GCD1	P09032	578 aa	Predicted RBP	4.63	□□□□□ -1.67
SNF2	YOR290C	BLI1	P35727	113 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	KEL1	P38853	1164 aa	Known RBP	4.63	□□□□□ -1.67
SNF2	YOR290C	UBP15	P50101	1230 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	YGR130C	P53278	816 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	RRP17	Q04031	235 aa	Predicted RBP	4.63	□□□□□ -1.67
SNF2	YOR290C	NHA1	Q99271	985 aa		4.63	□□□□□ -1.67
SNF2	YOR290C	OLA1	P38219	394 aa	Known RBP	4.62	□□□□□ -1.67
SNF2	YOR290C	MGA2	P40578	1113 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	RPA34	P47006	233 aa	Predicted RBP	4.62	□□□□□ -1.67
SNF2	YOR290C	MPC54	Q08550	464 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	BNI4	P53858	892 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	RTC5	Q12108	567 aa	Known RBP	4.62	□□□□□ -1.67
SNF2	YOR290C	PSR2	Q07949	397 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	SEC7	P11075	2009 aa	Known RBP	4.62	□□□□□ -1.67
SNF2	YOR290C	RTF1	P53064	558 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	UBP10	P53874	792 aa	Predicted RBP	4.62	□□□□□ -1.67
SNF2	YOR290C	ZEO1	Q08245	113 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	RTP1	Q12751	981 aa		4.62	□□□□□ -1.67
SNF2	YOR290C	SMY2	P32909	740 aa	Known RBP	4.61	□□□□□ -1.67
SNF2	YOR290C	CAJ1	P39101	391 aa		4.61	□□□□□ -1.67
SNF2	YOR290C	VTC2	P43585	828 aa		4.61	□□□□□ -1.67
SNF2	YOR290C	APL5	Q08951	932 aa	Known RBP	4.61	□□□□□ -1.67
SNF2	YOR290C	ARL1	P38116	183 aa	Known RBP	4.61	□□□□□ -1.67
SNF2	YOR290C	BRR1	Q99177	341 aa	Predicted RBP	4.61	□□□□□ -1.67
SNF2	YOR290C	GEF1	P37020	779 aa		4.61	□□□□□ -1.67
SNF2	YOR290C	HCA4	P20448	770 aa	Known RBP	4.6	□□□□□ -1.67
SNF2	YOR290C	MCM5	P29496	775 aa	Known RBP	4.6	□□□□□ -1.67
SNF2	YOR290C	COG4	Q06096	861 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	ASI3	P53983	676 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	PUF6	Q04373	656 aa	Known RBP	4.6	□□□□□ -1.67
SNF2	YOR290C	PRP4	P20053	465 aa	Known RBP	4.6	□□□□□ -1.67
SNF2	YOR290C	MET10	P39692	1035 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	OSW7	P43611	510 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	OMS1	Q06668	471 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	RPC31	P17890	251 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	RPC37	P36121	282 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	TPM2	P40414	161 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	AIM7	Q12156	149 aa		4.6	□□□□□ -1.67
SNF2	YOR290C	SSM4	P40318	1319 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms